RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 SUCLA2Q9P2R7 463 aaPredicted RBP10.05□□□□□ -0.8
GGA3-207ENST00000578896 DDX25Q9UHL0 483 aaKnown RBP10.05□□□□□ -0.8
GGA3-207ENST00000578896 CYP3A7-CYP3A51PA0A087WV96 503 aa10.04□□□□□ -0.8
GGA3-207ENST00000578896 FAM205CA6NFA0 338 aa10.04□□□□□ -0.8
GGA3-207ENST00000578896 LOC730098B7Z3J9 87 aa10.04□□□□□ -0.8
GGA3-207ENST00000578896 WEE2P0C1S8 567 aa10.04□□□□□ -0.8
GGA3-207ENST00000578896 CYP3A7P24462 503 aa10.04□□□□□ -0.8
GGA3-207ENST00000578896 HOXD11P31277 338 aaPredicted RBP10.04□□□□□ -0.8
GGA3-207ENST00000578896 FOSBP53539 338 aa10.04□□□□□ -0.8
GGA3-207ENST00000578896 PLCB3Q01970 1234 aa10.04□□□□□ -0.8
GGA3-207ENST00000578896 HERC4Q5GLZ8 1057 aaPredicted RBP10.04□□□□□ -0.8
GGA3-207ENST00000578896 SYCE2Q6PIF2 218 aa10.04□□□□□ -0.8
GGA3-207ENST00000578896 ANO5Q75V66 913 aa10.04□□□□□ -0.8
GGA3-207ENST00000578896 ALYREFQ86V81 257 aaKnown RBP10.04□□□□□ -0.8
GGA3-207ENST00000578896 TMEM173Q86WV6 379 aaPredicted RBP10.04□□□□□ -0.8
GGA3-207ENST00000578896 LRRC43Q8N309 656 aa10.04□□□□□ -0.8
GGA3-207ENST00000578896 FEZF2Q8TBJ5 459 aa10.04□□□□□ -0.8
GGA3-207ENST00000578896 AUTS2Q8WXX7 1259 aa10.04□□□□□ -0.8
GGA3-207ENST00000578896 NLRP4Q96MN2 994 aa10.04□□□□□ -0.8
GGA3-207ENST00000578896 MBOAT7Q96N66 472 aa10.04□□□□□ -0.8
GGA3-207ENST00000578896 POP1Q99575 1024 aaKnown RBP10.04□□□□□ -0.8
GGA3-207ENST00000578896 NIFKQ9BYG3 293 aaKnown RBP10.04□□□□□ -0.8
GGA3-207ENST00000578896 GCOM2Q9BZD3 368 aaPredicted RBP10.04□□□□□ -0.8
GGA3-207ENST00000578896 SLKQ9H2G2 1235 aaPredicted RBP10.04□□□□□ -0.8
GGA3-207ENST00000578896 WRAP73Q9P2S5 460 aaPredicted RBP10.04□□□□□ -0.8
GGA3-207ENST00000578896 PUF60Q9UHX1 559 aaKnown RBP10.04□□□□□ -0.8
GGA3-207ENST00000578896 TPCN1Q9ULQ1 816 aa10.04□□□□□ -0.8
GGA3-207ENST00000578896 INPP5FQ9Y2H2 1132 aa10.04□□□□□ -0.8
GGA3-207ENST00000578896 PTPRZ1P23471 2315 aaPredicted RBP10.04□□□□□ -0.8
GGA3-207ENST00000578896 IGKV6-21A0A0C4DH24 114 aa10.03□□□□□ -0.8
GGA3-207ENST00000578896 A0A0U1RQF3 1178 aa10.03□□□□□ -0.8
GGA3-207ENST00000578896 ZBTB39O15060 712 aa10.03□□□□□ -0.8
GGA3-207ENST00000578896 HOXA2O43364 376 aa10.03□□□□□ -0.8
GGA3-207ENST00000578896 CTDNEP1O95476 244 aa10.03□□□□□ -0.8
GGA3-207ENST00000578896 PHKA2P46019 1235 aa10.03□□□□□ -0.8
GGA3-207ENST00000578896 BCAR1P56945 870 aa10.03□□□□□ -0.8
GGA3-207ENST00000578896 TWF2Q6IBS0 349 aaKnown RBP10.03□□□□□ -0.8
GGA3-207ENST00000578896 ANKRD54Q6NXT1 300 aa10.03□□□□□ -0.8
GGA3-207ENST00000578896 PIK3AP1Q6ZUJ8 805 aa10.03□□□□□ -0.8
GGA3-207ENST00000578896 SLC39A11Q8N1S5 342 aa10.03□□□□□ -0.8
GGA3-207ENST00000578896 C12orf76Q8N812 135 aaPredicted RBP10.03□□□□□ -0.8
GGA3-207ENST00000578896 DAGLBQ8NCG7 672 aa10.03□□□□□ -0.8
GGA3-207ENST00000578896 BCL7CQ8WUZ0 217 aaPredicted RBP10.03□□□□□ -0.8
GGA3-207ENST00000578896 EDAQ92838 391 aa10.03□□□□□ -0.8
GGA3-207ENST00000578896 TMEM143Q96AN5 459 aa10.03□□□□□ -0.8
GGA3-207ENST00000578896 FBXL18Q96ME1 805 aa10.03□□□□□ -0.8
GGA3-207ENST00000578896 PHF20Q9BVI0 1012 aa10.03□□□□□ -0.8
GGA3-207ENST00000578896 PHF7Q9BWX1 381 aaPredicted RBP10.03□□□□□ -0.8
GGA3-207ENST00000578896 TM6SF1Q9BZW5 370 aa10.03□□□□□ -0.8
GGA3-207ENST00000578896 GBP3Q9H0R5 595 aa10.03□□□□□ -0.8
GGA3-207ENST00000578896 S1PR5Q9H228 398 aa10.03□□□□□ -0.8
GGA3-207ENST00000578896 RNF216Q9NWF9 866 aaPredicted RBP10.03□□□□□ -0.8
GGA3-207ENST00000578896 SPG21Q9NZD8 308 aa10.03□□□□□ -0.8
GGA3-207ENST00000578896 VAV3Q9UKW4 847 aa10.03□□□□□ -0.8
GGA3-207ENST00000578896 PIN4Q9Y237 131 aaKnown RBP10.03□□□□□ -0.8
GGA3-207ENST00000578896 A0A087WWV3 80 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 CCDC194A0A1B0GVG4 234 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 TMEM221A6NGB7 291 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 C2orf71A6NGG8 1288 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 M0R296 226 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 B4GALT3O60512 393 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 CCNT1O60563 726 aaKnown RBP10.02□□□□□ -0.81
GGA3-207ENST00000578896 CLASP2O75122 1294 aaKnown RBP10.02□□□□□ -0.81
GGA3-207ENST00000578896 ZC3H11AO75152 810 aaKnown RBP eCLIP10.02□□□□□ -0.81
GGA3-207ENST00000578896 MAFO75444 373 aaPredicted RBP10.02□□□□□ -0.81
GGA3-207ENST00000578896 CXCL14O95715 111 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 EOMESO95936 686 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 SRGAP2CP0DJJ0 459 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 AFF1P51825 1210 aaKnown RBP10.02□□□□□ -0.81
GGA3-207ENST00000578896 PSMC5P62195 406 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 KRT17Q04695 432 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 KCNC3Q14003 757 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 CTTNQ14247 550 aaKnown RBP10.02□□□□□ -0.81
GGA3-207ENST00000578896 IER5LQ5T953 404 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 NCAPH2Q6IBW4 605 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 CPLX2Q6PUV4 134 aaKnown RBP10.02□□□□□ -0.81
GGA3-207ENST00000578896 CATSPER4Q7RTX7 472 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 KRT25Q7Z3Z0 450 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 POTEDQ86YR6 584 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 NECAB1Q8N987 351 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 RDM1Q8NG50 284 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 SUSD6Q92537 303 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 HAS1Q92839 578 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 CEP170P1Q96L14 293 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 CDCA3Q99618 268 aaPredicted RBP10.02□□□□□ -0.81
GGA3-207ENST00000578896 C22orf23Q9BZE7 217 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 NRDE2Q9H7Z3 1164 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 MINDY3Q9H8M7 445 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 CYP26B1Q9NR63 512 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 TSHZ2Q9NRE2 1034 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 RGL1Q9NZL6 768 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 DNAJB4Q9UDY4 337 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 LZTS1Q9Y250 596 aa10.02□□□□□ -0.81
GGA3-207ENST00000578896 ARIH1Q9Y4X5 557 aaPredicted RBP10.02□□□□□ -0.81
GGA3-207ENST00000578896 MARCH6O60337 910 aa10.01□□□□□ -0.81
GGA3-207ENST00000578896 OFD1O75665 1012 aa10.01□□□□□ -0.81
GGA3-207ENST00000578896 LARGE1O95461 756 aa10.01□□□□□ -0.81
GGA3-207ENST00000578896 SFPQP23246 707 aaKnown RBP eCLIP10.01□□□□□ -0.81
GGA3-207ENST00000578896 PPM1AP35813 382 aa10.01□□□□□ -0.81
GGA3-207ENST00000578896 QARSP47897 775 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms