RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 STXBP4Q6ZWJ1 553 aa12.46□□□□□ -0.41
CDK5RAP3-210ENST00000578733 SH3RF1Q7Z6J0 888 aa12.46□□□□□ -0.41
CDK5RAP3-210ENST00000578733 KIAA0319LQ8IZA0 1049 aa12.46□□□□□ -0.41
CDK5RAP3-210ENST00000578733 MYCT1Q8N699 235 aa12.46□□□□□ -0.41
CDK5RAP3-210ENST00000578733 LINC01465Q8N7H1 131 aa12.46□□□□□ -0.41
CDK5RAP3-210ENST00000578733 LRRC15Q8TF66 581 aa12.46□□□□□ -0.41
CDK5RAP3-210ENST00000578733 STAMQ92783 540 aa12.46□□□□□ -0.41
CDK5RAP3-210ENST00000578733 SMARCE1Q969G3 411 aa12.46□□□□□ -0.41
CDK5RAP3-210ENST00000578733 GCOM2Q9BZD3 368 aaPredicted RBP12.46□□□□□ -0.41
CDK5RAP3-210ENST00000578733 CLSTN2Q9H4D0 955 aa12.46□□□□□ -0.41
CDK5RAP3-210ENST00000578733 PRDM5Q9NQX1 630 aaPredicted RBP12.46□□□□□ -0.41
CDK5RAP3-210ENST00000578733 EXOC1Q9NV70 894 aa12.46□□□□□ -0.41
CDK5RAP3-210ENST00000578733 PANK4Q9NVE7 773 aa12.46□□□□□ -0.41
CDK5RAP3-210ENST00000578733 STXBP5LQ9Y2K9 1186 aa12.46□□□□□ -0.41
CDK5RAP3-210ENST00000578733 TRPV2Q9Y5S1 764 aa12.46□□□□□ -0.41
CDK5RAP3-210ENST00000578733 LRRIQ4A6NIV6 560 aa12.45□□□□□ -0.42
CDK5RAP3-210ENST00000578733 MAPTP10636 758 aaKnown RBP12.45□□□□□ -0.42
CDK5RAP3-210ENST00000578733 SELPP16109 830 aa12.45□□□□□ -0.42
CDK5RAP3-210ENST00000578733 GPC3P51654 580 aa12.45□□□□□ -0.42
CDK5RAP3-210ENST00000578733 CRYBB1P53674 252 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-210ENST00000578733 POU5F1BQ06416 359 aa12.45□□□□□ -0.42
CDK5RAP3-210ENST00000578733 RBL2Q08999 1139 aa12.45□□□□□ -0.42
CDK5RAP3-210ENST00000578733 NCBP1Q09161 790 aaKnown RBP12.45□□□□□ -0.42
CDK5RAP3-210ENST00000578733 FAAP100Q0VG06 881 aa12.45□□□□□ -0.42
CDK5RAP3-210ENST00000578733 LAMTOR4Q0VGL1 99 aa12.45□□□□□ -0.42
CDK5RAP3-210ENST00000578733 PSMD2Q13200 908 aa12.45□□□□□ -0.42
CDK5RAP3-210ENST00000578733 CUL4BQ13620 913 aa12.45□□□□□ -0.42
CDK5RAP3-210ENST00000578733 ALCAMQ13740 583 aa12.45□□□□□ -0.42
CDK5RAP3-210ENST00000578733 HIC1Q14526 733 aa12.45□□□□□ -0.42
CDK5RAP3-210ENST00000578733 NFKBIBQ15653 356 aa12.45□□□□□ -0.42
CDK5RAP3-210ENST00000578733 KLHL40Q2TBA0 621 aa12.45□□□□□ -0.42
CDK5RAP3-210ENST00000578733 HERC4Q5GLZ8 1057 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-210ENST00000578733 DEFB123Q8N688 67 aa12.45□□□□□ -0.42
CDK5RAP3-210ENST00000578733 DEPTORQ8TB45 409 aa12.45□□□□□ -0.42
CDK5RAP3-210ENST00000578733 GPT2Q8TD30 523 aa12.45□□□□□ -0.42
CDK5RAP3-210ENST00000578733 SPIRE2Q8WWL2 714 aa12.45□□□□□ -0.42
CDK5RAP3-210ENST00000578733 PRPF31Q8WWY3 499 aaKnown RBP12.45□□□□□ -0.42
CDK5RAP3-210ENST00000578733 DNAJC19Q96DA6 116 aa12.45□□□□□ -0.42
CDK5RAP3-210ENST00000578733 NLRP4Q96MN2 994 aa12.45□□□□□ -0.42
CDK5RAP3-210ENST00000578733 BLZF1Q9H2G9 400 aa12.45□□□□□ -0.42
CDK5RAP3-210ENST00000578733 HIPK3Q9H422 1215 aa12.45□□□□□ -0.42
CDK5RAP3-210ENST00000578733 KMT5AQ9NQR1 393 aa12.45□□□□□ -0.42
CDK5RAP3-210ENST00000578733 LTBP2Q14767 1821 aa12.45□□□□□ -0.42
CDK5RAP3-210ENST00000578733 NPHP3-ACAD11A0A0J9YXS1 232 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 FRMD3A2A2Y4 597 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 CCDC169A6NNP5 214 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 RSPH10B2B2RC85 870 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 TRAK2O60296 914 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 KIF20AO95235 890 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 VTNP04004 478 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 RPN1P04843 607 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 RSPH10BP0C881 870 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 CKBP12277 381 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 RAG1P15918 1043 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 SFPQP23246 707 aaKnown RBP eCLIP12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 GLRA2P23416 452 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 RFC2P35250 354 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 ZNF131P52739 623 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 EFNA5P52803 228 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 PEX3P56589 373 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 NLRP11P59045 1033 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 CACNB1Q02641 598 aaPredicted RBP12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 DPYDQ12882 1025 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 PNOCQ13519 176 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 PCBP1Q15365 356 aaKnown RBP eCLIP12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 FAM26DQ5JW98 314 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 CCDC183Q5T5S1 534 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 FAM43BQ6ZT52 329 aaPredicted RBP12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 LRRC8DQ7L1W4 858 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 SRGAP1Q7Z6B7 1085 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 FAM178BQ8IXR5 827 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 GRAMD1CQ8IYS0 662 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 USP38Q8NB14 1042 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 RNF149Q8NC42 400 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 ZBTB10Q96DT7 871 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 GSDMAQ96QA5 445 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 GDF15Q99988 308 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 NFKBIZQ9BYH8 718 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 CELF4Q9BZC1 486 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 MRPL44Q9H9J2 332 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 GPRC5CQ9NQ84 441 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 OLFML3Q9NRN5 406 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 GINS2Q9Y248 185 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 CDY2AQ9Y6F7 541 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 SQORQ9Y6N5 450 aa12.44□□□□□ -0.42
CDK5RAP3-210ENST00000578733 UNC80Q8N2C7 3258 aa12.43□□□□□ -0.42
CDK5RAP3-210ENST00000578733 K7ENM7 598 aa12.43□□□□□ -0.42
CDK5RAP3-210ENST00000578733 KIAA0355O15063 1070 aa12.43□□□□□ -0.42
CDK5RAP3-210ENST00000578733 LETM1O95202 739 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-210ENST00000578733 CTSHP09668 335 aa12.43□□□□□ -0.42
CDK5RAP3-210ENST00000578733 SRGAP2CP0DJJ0 459 aa12.43□□□□□ -0.42
CDK5RAP3-210ENST00000578733 TMEM62Q0P6H9 643 aa12.43□□□□□ -0.42
CDK5RAP3-210ENST00000578733 STRN3Q13033 797 aa12.43□□□□□ -0.42
CDK5RAP3-210ENST00000578733 COASYQ13057 564 aa12.43□□□□□ -0.42
CDK5RAP3-210ENST00000578733 MAPK7Q13164 816 aa12.43□□□□□ -0.42
CDK5RAP3-210ENST00000578733 MKRN4PQ13434 485 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-210ENST00000578733 DRP2Q13474 957 aa12.43□□□□□ -0.42
CDK5RAP3-210ENST00000578733 CAPSQ13938 189 aa12.43□□□□□ -0.42
CDK5RAP3-210ENST00000578733 KCNB1Q14721 858 aa12.43□□□□□ -0.42
CDK5RAP3-210ENST00000578733 CAMK4Q16566 473 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms