RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 PANK2Q9BZ23 570 aa12.78□□□□□ -0.36
ERBB2-208ENST00000578630 OSBPL7Q9BZF2 842 aa12.78□□□□□ -0.36
ERBB2-208ENST00000578630 POLR3FQ9H1D9 316 aaPredicted RBP12.78□□□□□ -0.36
ERBB2-208ENST00000578630 ERVK-5Q9HDB9 667 aa12.78□□□□□ -0.36
ERBB2-208ENST00000578630 CHMP5Q9NZZ3 219 aa12.78□□□□□ -0.36
ERBB2-208ENST00000578630 CXXC1Q9P0U4 656 aaPredicted RBP12.78□□□□□ -0.36
ERBB2-208ENST00000578630 STK17AQ9UEE5 414 aa12.78□□□□□ -0.36
ERBB2-208ENST00000578630 KRT18P05783 430 aaKnown RBP12.77□□□□□ -0.37
ERBB2-208ENST00000578630 ATP2A2P16615 1042 aaKnown RBP12.77□□□□□ -0.37
ERBB2-208ENST00000578630 GLRA2P23416 452 aa12.77□□□□□ -0.37
ERBB2-208ENST00000578630 GUCY2CP25092 1073 aa12.77□□□□□ -0.37
ERBB2-208ENST00000578630 STAT6P42226 847 aa12.77□□□□□ -0.37
ERBB2-208ENST00000578630 SLC12A3P55017 1021 aa12.77□□□□□ -0.37
ERBB2-208ENST00000578630 PTENP60484 403 aa12.77□□□□□ -0.37
ERBB2-208ENST00000578630 AXDND1Q5T1B0 1012 aaPredicted RBP12.77□□□□□ -0.37
ERBB2-208ENST00000578630 FAM228AQ86W67 206 aa12.77□□□□□ -0.37
ERBB2-208ENST00000578630 IQUBQ8NA54 791 aa12.77□□□□□ -0.37
ERBB2-208ENST00000578630 TMEM40Q8WWA1 233 aa12.77□□□□□ -0.37
ERBB2-208ENST00000578630 LARP4BQ92615 738 aaKnown RBP12.77□□□□□ -0.37
ERBB2-208ENST00000578630 ZBED2Q9BTP6 218 aa12.77□□□□□ -0.37
ERBB2-208ENST00000578630 LRRC27Q9C0I9 530 aa12.77□□□□□ -0.37
ERBB2-208ENST00000578630 C17orf75Q9HAS0 396 aa12.77□□□□□ -0.37
ERBB2-208ENST00000578630 GPRC5CQ9NQ84 441 aa12.77□□□□□ -0.37
ERBB2-208ENST00000578630 CHST12Q9NRB3 414 aa12.77□□□□□ -0.37
ERBB2-208ENST00000578630 DENND3A2RUS2 1198 aa12.76□□□□□ -0.37
ERBB2-208ENST00000578630 GOLGA6L4A6NEF3 574 aa12.76□□□□□ -0.37
ERBB2-208ENST00000578630 LRRIQ4A6NIV6 560 aa12.76□□□□□ -0.37
ERBB2-208ENST00000578630 CMA1P23946 247 aa12.76□□□□□ -0.37
ERBB2-208ENST00000578630 SMTNP53814 917 aa12.76□□□□□ -0.37
ERBB2-208ENST00000578630 WDR5P61964 334 aaKnown RBP12.76□□□□□ -0.37
ERBB2-208ENST00000578630 SMAD3P84022 425 aaKnown RBP12.76□□□□□ -0.37
ERBB2-208ENST00000578630 AMPD3Q01432 767 aa12.76□□□□□ -0.37
ERBB2-208ENST00000578630 MCM6Q14566 821 aa12.76□□□□□ -0.37
ERBB2-208ENST00000578630 CSPP1Q1MSJ5 1256 aa12.76□□□□□ -0.37
ERBB2-208ENST00000578630 SHC4Q6S5L8 630 aa12.76□□□□□ -0.37
ERBB2-208ENST00000578630 CATSPER4Q7RTX7 472 aa12.76□□□□□ -0.37
ERBB2-208ENST00000578630 ZBTB8OSQ8IWT0 167 aa12.76□□□□□ -0.37
ERBB2-208ENST00000578630 MYOCDQ8IZQ8 938 aa12.76□□□□□ -0.37
ERBB2-208ENST00000578630 DEPTORQ8TB45 409 aa12.76□□□□□ -0.37
ERBB2-208ENST00000578630 ASAP3Q8TDY4 903 aa12.76□□□□□ -0.37
ERBB2-208ENST00000578630 IPO9Q96P70 1041 aaKnown RBP12.76□□□□□ -0.37
ERBB2-208ENST00000578630 NFKBIZQ9BYH8 718 aa12.76□□□□□ -0.37
ERBB2-208ENST00000578630 C2orf40Q9H1Z8 148 aa12.76□□□□□ -0.37
ERBB2-208ENST00000578630 IFT122Q9HBG6 1241 aa12.76□□□□□ -0.37
ERBB2-208ENST00000578630 TSHZ2Q9NRE2 1034 aa12.76□□□□□ -0.37
ERBB2-208ENST00000578630 C1orf112Q9NSG2 853 aa12.76□□□□□ -0.37
ERBB2-208ENST00000578630 BLOC1S4Q9NUP1 217 aa12.76□□□□□ -0.37
ERBB2-208ENST00000578630 DACT1Q9NYF0 836 aa12.76□□□□□ -0.37
ERBB2-208ENST00000578630 MSRAQ9UJ68 235 aa12.76□□□□□ -0.37
ERBB2-208ENST00000578630 LTBP2Q14767 1821 aa12.76□□□□□ -0.37
ERBB2-208ENST00000578630 TET1Q8NFU7 2136 aa12.76□□□□□ -0.37
ERBB2-208ENST00000578630 CCDC169A6NNP5 214 aa12.75□□□□□ -0.37
ERBB2-208ENST00000578630 INO80B-WBP1J3KQ70 363 aa12.75□□□□□ -0.37
ERBB2-208ENST00000578630 HIP1RO75146 1068 aa12.75□□□□□ -0.37
ERBB2-208ENST00000578630 CSDE1O75534 798 aaKnown RBP12.75□□□□□ -0.37
ERBB2-208ENST00000578630 ERLIN2O94905 339 aa12.75□□□□□ -0.37
ERBB2-208ENST00000578630 STAG3L1P0CL83 205 aa12.75□□□□□ -0.37
ERBB2-208ENST00000578630 NAMPTP43490 491 aa12.75□□□□□ -0.37
ERBB2-208ENST00000578630 EFNA5P52803 228 aa12.75□□□□□ -0.37
ERBB2-208ENST00000578630 DMP1Q13316 513 aaPredicted RBP12.75□□□□□ -0.37
ERBB2-208ENST00000578630 CAPSQ13938 189 aa12.75□□□□□ -0.37
ERBB2-208ENST00000578630 RAB30Q15771 203 aa12.75□□□□□ -0.37
ERBB2-208ENST00000578630 TCTN1Q2MV58 587 aa12.75□□□□□ -0.37
ERBB2-208ENST00000578630 RESP18Q5W5W9 173 aa12.75□□□□□ -0.37
ERBB2-208ENST00000578630 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.75□□□□□ -0.373e-7■■□□□ 11.5
ERBB2-208ENST00000578630 SLC24A5Q71RS6 500 aa12.75□□□□□ -0.37
ERBB2-208ENST00000578630 GPBP1Q86WP2 473 aa12.75□□□□□ -0.37
ERBB2-208ENST00000578630 IFNLR1Q8IU57 520 aaPredicted RBP12.75□□□□□ -0.37
ERBB2-208ENST00000578630 PDILTQ8N807 584 aa12.75□□□□□ -0.37
ERBB2-208ENST00000578630 TOP1MTQ969P6 601 aa12.75□□□□□ -0.37
ERBB2-208ENST00000578630 ADAM2Q99965 735 aa12.75□□□□□ -0.37
ERBB2-208ENST00000578630 RUSC1Q9BVN2 902 aa12.75□□□□□ -0.37
ERBB2-208ENST00000578630 TSPYL2Q9H2G4 693 aaPredicted RBP12.75□□□□□ -0.37
ERBB2-208ENST00000578630 CUEDC2Q9H467 287 aa12.75□□□□□ -0.37
ERBB2-208ENST00000578630 POLD4Q9HCU8 107 aa12.75□□□□□ -0.37
ERBB2-208ENST00000578630 RGS18Q9NS28 235 aa12.75□□□□□ -0.37
ERBB2-208ENST00000578630 LARSQ9P2J5 1176 aaKnown RBP12.75□□□□□ -0.37
ERBB2-208ENST00000578630 SCN5AQ14524 2016 aa12.74□□□□□ -0.37
ERBB2-208ENST00000578630 PHLPP2Q6ZVD8 1323 aa12.74□□□□□ -0.37
ERBB2-208ENST00000578630 K7ERI5 159 aa12.74□□□□□ -0.37
ERBB2-208ENST00000578630 POLR2DO15514 142 aaKnown RBP12.74□□□□□ -0.37
ERBB2-208ENST00000578630 UPP2O95045 317 aa12.74□□□□□ -0.37
ERBB2-208ENST00000578630 SKIP12755 728 aa12.74□□□□□ -0.37
ERBB2-208ENST00000578630 FGFR4P22455 802 aa12.74□□□□□ -0.37
ERBB2-208ENST00000578630 AXLP30530 894 aa12.74□□□□□ -0.37
ERBB2-208ENST00000578630 PEX3P56589 373 aa12.74□□□□□ -0.37
ERBB2-208ENST00000578630 MAPK6Q16659 721 aa12.74□□□□□ -0.37
ERBB2-208ENST00000578630 ARSHQ5FYA8 562 aa12.74□□□□□ -0.37
ERBB2-208ENST00000578630 RTN4RL1Q86UN2 441 aaPredicted RBP12.74□□□□□ -0.37
ERBB2-208ENST00000578630 HERC6Q8IVU3 1022 aa12.74□□□□□ -0.37
ERBB2-208ENST00000578630 RAD9AQ99638 391 aa12.74□□□□□ -0.37
ERBB2-208ENST00000578630 TMX1Q9H3N1 280 aa12.74□□□□□ -0.37
ERBB2-208ENST00000578630 KMT5AQ9NQR1 393 aa12.74□□□□□ -0.37
ERBB2-208ENST00000578630 PRMT7Q9NVM4 692 aaPredicted RBP12.74□□□□□ -0.37
ERBB2-208ENST00000578630 KCNH3Q9ULD8 1083 aa12.74□□□□□ -0.37
ERBB2-208ENST00000578630 LRFN2Q9ULH4 789 aa12.74□□□□□ -0.37
ERBB2-208ENST00000578630 ODF2LQ9ULJ1 636 aa12.74□□□□□ -0.37
ERBB2-208ENST00000578630 PCDHB7Q9Y5E2 793 aa12.74□□□□□ -0.37
ERBB2-208ENST00000578630 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.73□□□□□ -0.37
ERBB2-208ENST00000578630 A0A1W2PQ27 194 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms