RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 TMEM173Q86WV6 379 aaPredicted RBP23.66■■□□□ 1.38
TSEN54-205ENST00000578415 CCDC148Q8NFR7 591 aa23.66■■□□□ 1.38
TSEN54-205ENST00000578415 JAKMIP1Q96N16 626 aaKnown RBP23.66■■□□□ 1.38
TSEN54-205ENST00000578415 NECTIN4Q96NY8 510 aa23.66■■□□□ 1.38
TSEN54-205ENST00000578415 CEP89Q96ST8 783 aa23.66■■□□□ 1.38
TSEN54-205ENST00000578415 RNF26Q9BY78 433 aaPredicted RBP23.66■■□□□ 1.38
TSEN54-205ENST00000578415 MRPL9Q9BYD2 267 aaKnown RBP23.66■■□□□ 1.38
TSEN54-205ENST00000578415 TMEM150BA6NC51 233 aa23.65■■□□□ 1.38
TSEN54-205ENST00000578415 ALDH7A1P49419 539 aaKnown RBP23.65■■□□□ 1.38
TSEN54-205ENST00000578415 USP11P51784 963 aa23.65■■□□□ 1.38
TSEN54-205ENST00000578415 AKAP17AQ02040 695 aaKnown RBP23.65■■□□□ 1.38
TSEN54-205ENST00000578415 CES5AQ6NT32 575 aa23.65■■□□□ 1.38
TSEN54-205ENST00000578415 FBXL16Q8N461 479 aa23.65■■□□□ 1.38
TSEN54-205ENST00000578415 TEKT3Q9BXF9 490 aa23.65■■□□□ 1.38
TSEN54-205ENST00000578415 AGXT2Q9BYV1 514 aa23.65■■□□□ 1.38
TSEN54-205ENST00000578415 SORCS3Q9UPU3 1222 aa23.65■■□□□ 1.38
TSEN54-205ENST00000578415 ST18O60284 1047 aa23.64■■□□□ 1.37
TSEN54-205ENST00000578415 PSMD10O75832 226 aa23.64■■□□□ 1.37
TSEN54-205ENST00000578415 STBD1O95210 358 aa23.64■■□□□ 1.37
TSEN54-205ENST00000578415 BRD1O95696 1058 aa23.64■■□□□ 1.37
TSEN54-205ENST00000578415 CXCL14O95715 111 aa23.64■■□□□ 1.37
TSEN54-205ENST00000578415 WEE2P0C1S8 567 aa23.64■■□□□ 1.37
TSEN54-205ENST00000578415 PHKA2P46019 1235 aa23.64■■□□□ 1.37
TSEN54-205ENST00000578415 VPS52Q8N1B4 723 aa23.64■■□□□ 1.37
TSEN54-205ENST00000578415 AUTS2Q8WXX7 1259 aa23.64■■□□□ 1.37
TSEN54-205ENST00000578415 TMEM169Q96HH4 297 aa23.64■■□□□ 1.37
TSEN54-205ENST00000578415 TRAIPQ9BWF2 469 aa23.64■■□□□ 1.37
TSEN54-205ENST00000578415 SLC26A6Q9BXS9 759 aa23.64■■□□□ 1.37
TSEN54-205ENST00000578415 NIFKQ9BYG3 293 aaKnown RBP23.64■■□□□ 1.37
TSEN54-205ENST00000578415 GCOM2Q9BZD3 368 aaPredicted RBP23.64■■□□□ 1.37
TSEN54-205ENST00000578415 ZBP1Q9H171 429 aa23.64■■□□□ 1.37
TSEN54-205ENST00000578415 SMOC2Q9H3U7 446 aa23.64■■□□□ 1.37
TSEN54-205ENST00000578415 CHST12Q9NRB3 414 aa23.64■■□□□ 1.37
TSEN54-205ENST00000578415 SNX14Q9Y5W7 946 aa23.64■■□□□ 1.37
TSEN54-205ENST00000578415 IGKV6-21A0A0C4DH24 114 aa23.63■■□□□ 1.37
TSEN54-205ENST00000578415 IFNAR1P17181 557 aa23.63■■□□□ 1.37
TSEN54-205ENST00000578415 CA8P35219 290 aa23.63■■□□□ 1.37
TSEN54-205ENST00000578415 MTMR3Q13615 1198 aa23.63■■□□□ 1.37
TSEN54-205ENST00000578415 MTERF2Q49AM1 385 aa23.63■■□□□ 1.37
TSEN54-205ENST00000578415 BLOC1S2Q6QNY1 142 aa23.63■■□□□ 1.37
TSEN54-205ENST00000578415 B3GNT9Q6UX72 402 aa23.63■■□□□ 1.37
TSEN54-205ENST00000578415 UBALD2Q8IYN6 164 aa23.63■■□□□ 1.37
TSEN54-205ENST00000578415 C12orf76Q8N812 135 aaPredicted RBP23.63■■□□□ 1.37
TSEN54-205ENST00000578415 RDM1Q8NG50 284 aa23.63■■□□□ 1.37
TSEN54-205ENST00000578415 BCL7CQ8WUZ0 217 aaPredicted RBP23.63■■□□□ 1.37
TSEN54-205ENST00000578415 LPPQ93052 612 aa23.63■■□□□ 1.37
TSEN54-205ENST00000578415 SH2D3AQ9BRG2 576 aa23.63■■□□□ 1.37
TSEN54-205ENST00000578415 SEPT9Q9UHD8 586 aaPredicted RBP23.63■■□□□ 1.37
TSEN54-205ENST00000578415 A0A087WZ62 844 aa23.62■■□□□ 1.37
TSEN54-205ENST00000578415 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.62■■□□□ 1.37
TSEN54-205ENST00000578415 GFRA3O60609 400 aa23.62■■□□□ 1.37
TSEN54-205ENST00000578415 ZC3H11AO75152 810 aaKnown RBP eCLIP23.62■■□□□ 1.37
TSEN54-205ENST00000578415 RPS6KB1P23443 525 aa23.62■■□□□ 1.37
TSEN54-205ENST00000578415 HSPA4P34932 840 aa23.62■■□□□ 1.37
TSEN54-205ENST00000578415 MTHFRP42898 656 aa23.62■■□□□ 1.37
TSEN54-205ENST00000578415 XKR3Q5GH77 459 aa23.62■■□□□ 1.37
TSEN54-205ENST00000578415 RARS2Q5T160 578 aaKnown RBP23.62■■□□□ 1.37
TSEN54-205ENST00000578415 KANK3Q6NY19 840 aa23.62■■□□□ 1.37
TSEN54-205ENST00000578415 MIER3Q7Z3K6 550 aa23.62■■□□□ 1.37
TSEN54-205ENST00000578415 TBCKQ8TEA7 893 aa23.62■■□□□ 1.37
TSEN54-205ENST00000578415 FDXACB1Q9BRP7 624 aaPredicted RBP23.62■■□□□ 1.37
TSEN54-205ENST00000578415 NCOA5Q9HCD5 579 aaKnown RBP23.62■■□□□ 1.37
TSEN54-205ENST00000578415 IRAK3Q9Y616 596 aa23.62■■□□□ 1.37
TSEN54-205ENST00000578415 WDR81Q562E7 1941 aa23.62■■□□□ 1.37
TSEN54-205ENST00000578415 MEIS3P2A8K0S8 358 aa23.61■■□□□ 1.37
TSEN54-205ENST00000578415 H0Y858 1186 aa23.61■■□□□ 1.37
TSEN54-205ENST00000578415 EPCAMP16422 314 aa23.61■■□□□ 1.37
TSEN54-205ENST00000578415 NUBP1P53384 320 aa23.61■■□□□ 1.37
TSEN54-205ENST00000578415 CDC42EP1Q00587 391 aa23.61■■□□□ 1.37
TSEN54-205ENST00000578415 LONRF3Q496Y0 759 aa23.61■■□□□ 1.37
TSEN54-205ENST00000578415 Q4G0T1 1027 aa23.61■■□□□ 1.37
TSEN54-205ENST00000578415 FEZF2Q8TBJ5 459 aa23.61■■□□□ 1.37
TSEN54-205ENST00000578415 RSPH1Q8WYR4 309 aa23.61■■□□□ 1.37
TSEN54-205ENST00000578415 ATOH1Q92858 354 aaPredicted RBP23.61■■□□□ 1.37
TSEN54-205ENST00000578415 IGSF21Q96ID5 467 aa23.61■■□□□ 1.37
TSEN54-205ENST00000578415 IRF2BPLQ9H1B7 796 aa23.61■■□□□ 1.37
TSEN54-205ENST00000578415 NRDE2Q9H7Z3 1164 aa23.61■■□□□ 1.37
TSEN54-205ENST00000578415 SH3GLB2Q9NR46 395 aa23.61■■□□□ 1.37
TSEN54-205ENST00000578415 TBC1D13Q9NVG8 400 aa23.61■■□□□ 1.37
TSEN54-205ENST00000578415 DZANK1Q9NVP4 752 aa23.61■■□□□ 1.37
TSEN54-205ENST00000578415 ZFHX2Q9C0A1 2572 aaPredicted RBP23.61■■□□□ 1.37
TSEN54-205ENST00000578415 TDP2O95551 362 aa23.6■■□□□ 1.37
TSEN54-205ENST00000578415 ASGR2P07307 311 aa23.6■■□□□ 1.37
TSEN54-205ENST00000578415 CTSAP10619 480 aa23.6■■□□□ 1.37
TSEN54-205ENST00000578415 SFPQP23246 707 aaKnown RBP eCLIP23.6■■□□□ 1.37
TSEN54-205ENST00000578415 PDIA3P30101 505 aaKnown RBP23.6■■□□□ 1.37
TSEN54-205ENST00000578415 POLGP54098 1239 aaPredicted RBP23.6■■□□□ 1.37
TSEN54-205ENST00000578415 NLRP5P59047 1200 aa23.6■■□□□ 1.37
TSEN54-205ENST00000578415 BMS1Q14692 1282 aaKnown RBP23.6■■□□□ 1.37
TSEN54-205ENST00000578415 TWF2Q6IBS0 349 aaKnown RBP23.6■■□□□ 1.37
TSEN54-205ENST00000578415 KIAA1841Q6NSI8 718 aa23.6■■□□□ 1.37
TSEN54-205ENST00000578415 DDX53Q86TM3 631 aaKnown RBP23.6■■□□□ 1.37
TSEN54-205ENST00000578415 ZNF410Q86VK4 478 aa23.6■■□□□ 1.37
TSEN54-205ENST00000578415 SLC22A17Q8WUG5 538 aa23.6■■□□□ 1.37
TSEN54-205ENST00000578415 PIN4Q9Y237 131 aaKnown RBP23.6■■□□□ 1.37
TSEN54-205ENST00000578415 CYP3A7-CYP3A51PA0A087WV96 503 aa23.59■■□□□ 1.37
TSEN54-205ENST00000578415 GALR2O43603 387 aaPredicted RBP23.59■■□□□ 1.37
TSEN54-205ENST00000578415 GALTP07902 379 aa23.59■■□□□ 1.37
TSEN54-205ENST00000578415 CYP3A7P24462 503 aa23.59■■□□□ 1.37
TSEN54-205ENST00000578415 EVCP57679 992 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms