RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 RNF216Q9NWF9 866 aaPredicted RBP25.68■■□□□ 1.7
LIMD2-204ENST00000578297 DNM3Q9UQ16 869 aa25.68■■□□□ 1.7
LIMD2-204ENST00000578297 COL4A6Q14031 1691 aa25.68■■□□□ 1.7
LIMD2-204ENST00000578297 DGKIO75912 1065 aa25.67■■□□□ 1.7
LIMD2-204ENST00000578297 EYA4O95677 639 aa25.67■■□□□ 1.7
LIMD2-204ENST00000578297 CYP11B2P19099 503 aa25.67■■□□□ 1.7
LIMD2-204ENST00000578297 LONP1P36776 959 aaKnown RBP25.67■■□□□ 1.7
LIMD2-204ENST00000578297 FAM189BP81408 668 aa25.67■■□□□ 1.7
LIMD2-204ENST00000578297 ASAP3Q8TDY4 903 aa25.67■■□□□ 1.7
LIMD2-204ENST00000578297 MYLIPQ8WY64 445 aa25.67■■□□□ 1.7
LIMD2-204ENST00000578297 ZNF689Q96CS4 500 aaPredicted RBP25.67■■□□□ 1.7
LIMD2-204ENST00000578297 PRDM12Q9H4Q4 367 aa25.67■■□□□ 1.7
LIMD2-204ENST00000578297 RC3H2Q9HBD1 1191 aaKnown RBP25.67■■□□□ 1.7
LIMD2-204ENST00000578297 CHST12Q9NRB3 414 aa25.67■■□□□ 1.7
LIMD2-204ENST00000578297 SLC26A4O43511 780 aa25.66■■□□□ 1.7
LIMD2-204ENST00000578297 TFDP1Q14186 410 aa25.66■■□□□ 1.7
LIMD2-204ENST00000578297 NT5C3AQ9H0P0 336 aa25.66■■□□□ 1.7
LIMD2-204ENST00000578297 POLR3FQ9H1D9 316 aaPredicted RBP25.66■■□□□ 1.7
LIMD2-204ENST00000578297 PCDHB7Q9Y5E2 793 aa25.66■■□□□ 1.7
LIMD2-204ENST00000578297 E9PMD0 336 aa25.65■■□□□ 1.7
LIMD2-204ENST00000578297 ZSCAN22P10073 491 aaPredicted RBP25.65■■□□□ 1.7
LIMD2-204ENST00000578297 GLRA2P23416 452 aa25.65■■□□□ 1.7
LIMD2-204ENST00000578297 PHKA2P46019 1235 aa25.65■■□□□ 1.7
LIMD2-204ENST00000578297 PTENP60484 403 aa25.65■■□□□ 1.7
LIMD2-204ENST00000578297 CAPSQ13938 189 aa25.65■■□□□ 1.7
LIMD2-204ENST00000578297 MAEAQ7L5Y9 396 aa25.65■■□□□ 1.7
LIMD2-204ENST00000578297 CATSPER4Q7RTX7 472 aa25.65■■□□□ 1.7
LIMD2-204ENST00000578297 IFNLR1Q8IU57 520 aaPredicted RBP25.65■■□□□ 1.7
LIMD2-204ENST00000578297 PNMA5Q96PV4 448 aa25.65■■□□□ 1.7
LIMD2-204ENST00000578297 TGS1Q96RS0 853 aaKnown RBP25.65■■□□□ 1.7
LIMD2-204ENST00000578297 NFKBIZQ9BYH8 718 aa25.65■■□□□ 1.7
LIMD2-204ENST00000578297 ELAC1Q9H777 363 aaKnown RBP25.65■■□□□ 1.7
LIMD2-204ENST00000578297 MINDY3Q9H8M7 445 aa25.65■■□□□ 1.7
LIMD2-204ENST00000578297 GPRC5CQ9NQ84 441 aa25.65■■□□□ 1.7
LIMD2-204ENST00000578297 DACT1Q9NYF0 836 aa25.65■■□□□ 1.7
LIMD2-204ENST00000578297 LRFN2Q9ULH4 789 aa25.65■■□□□ 1.7
LIMD2-204ENST00000578297 MORC2Q9Y6X9 1032 aaPredicted RBP25.65■■□□□ 1.7
LIMD2-204ENST00000578297 ERVK-21P61565 698 aa25.64■■□□□ 1.7
LIMD2-204ENST00000578297 GRIN1Q05586 938 aa25.64■■□□□ 1.7
LIMD2-204ENST00000578297 GRB10Q13322 594 aa25.64■■□□□ 1.7
LIMD2-204ENST00000578297 FAM102BQ5T8I3 360 aa25.64■■□□□ 1.7
LIMD2-204ENST00000578297 SPRED2Q7Z698 418 aa25.64■■□□□ 1.7
LIMD2-204ENST00000578297 CABP7Q86V35 215 aa25.64■■□□□ 1.7
LIMD2-204ENST00000578297 USP28Q96RU2 1077 aa25.64■■□□□ 1.7
LIMD2-204ENST00000578297 GAS2L1Q99501 681 aaPredicted RBP25.64■■□□□ 1.7
LIMD2-204ENST00000578297 CERS4Q9HA82 394 aa25.64■■□□□ 1.7
LIMD2-204ENST00000578297 MYO9BQ13459 2157 aa25.63■■□□□ 1.69
LIMD2-204ENST00000578297 ADGRA3Q8IWK6 1321 aa25.63■■□□□ 1.69
LIMD2-204ENST00000578297 COL6A3P12111 3177 aa25.63■■□□□ 1.69
LIMD2-204ENST00000578297 UBA7P41226 1012 aa25.63■■□□□ 1.69
LIMD2-204ENST00000578297 CEBPZQ03701 1054 aaKnown RBP25.63■■□□□ 1.69
LIMD2-204ENST00000578297 PCBP1Q15365 356 aaKnown RBP eCLIP25.63■■□□□ 1.69
LIMD2-204ENST00000578297 ZRSR1Q15695 479 aaKnown RBP25.63■■□□□ 1.69
LIMD2-204ENST00000578297 KCNK18Q7Z418 384 aa25.63■■□□□ 1.69
LIMD2-204ENST00000578297 FIBCD1Q8N539 461 aa25.63■■□□□ 1.69
LIMD2-204ENST00000578297 ARNTL2Q8WYA1 636 aa25.63■■□□□ 1.69
LIMD2-204ENST00000578297 CDK5RAP3Q96JB5 506 aa25.63■■□□□ 1.69
LIMD2-204ENST00000578297 TRAIPQ9BWF2 469 aa25.63■■□□□ 1.69
LIMD2-204ENST00000578297 TMEM161AQ9NX61 479 aa25.63■■□□□ 1.69
LIMD2-204ENST00000578297 SRPRBQ9Y5M8 271 aaKnown RBP25.63■■□□□ 1.69
LIMD2-204ENST00000578297 A0A0U1RQF3 1178 aa25.62■■□□□ 1.69
LIMD2-204ENST00000578297 FOSL2P15408 326 aa25.62■■□□□ 1.69
LIMD2-204ENST00000578297 MARCKSP29966 332 aaPredicted RBP25.62■■□□□ 1.69
LIMD2-204ENST00000578297 NASPP49321 788 aaPredicted RBP25.62■■□□□ 1.69
LIMD2-204ENST00000578297 SLC39A14Q15043 492 aa25.62■■□□□ 1.69
LIMD2-204ENST00000578297 TMEM119Q4V9L6 283 aa25.62■■□□□ 1.69
LIMD2-204ENST00000578297 SAMD11Q96NU1 681 aa25.62■■□□□ 1.69
LIMD2-204ENST00000578297 AGPAT5Q9NUQ2 364 aa25.62■■□□□ 1.69
LIMD2-204ENST00000578297 FBXO2Q9UK22 296 aaPredicted RBP25.62■■□□□ 1.69
LIMD2-204ENST00000578297 PIN4Q9Y237 131 aaKnown RBP25.62■■□□□ 1.69
LIMD2-204ENST00000578297 EPOPA6NHQ4 379 aa25.61■■□□□ 1.69
LIMD2-204ENST00000578297 F13A1P00488 732 aa25.61■■□□□ 1.69
LIMD2-204ENST00000578297 BTG3Q14201 252 aaPredicted RBP25.61■■□□□ 1.69
LIMD2-204ENST00000578297 ECHDC2Q86YB7 292 aa25.61■■□□□ 1.69
LIMD2-204ENST00000578297 CMTR2Q8IYT2 770 aaKnown RBP25.61■■□□□ 1.69
LIMD2-204ENST00000578297 CALML4Q96GE6 196 aa25.61■■□□□ 1.69
LIMD2-204ENST00000578297 ZNF396Q96N95 335 aaPredicted RBP25.61■■□□□ 1.69
LIMD2-204ENST00000578297 MYH15Q9Y2K3 1946 aa25.61■■□□□ 1.69
LIMD2-204ENST00000578297 IBSPP21815 317 aaPredicted RBP25.6■■□□□ 1.69
LIMD2-204ENST00000578297 PKP1Q13835 747 aa25.6■■□□□ 1.69
LIMD2-204ENST00000578297 ADGRE1Q14246 886 aa25.6■■□□□ 1.69
LIMD2-204ENST00000578297 FOXD4L5Q5VV16 416 aaPredicted RBP25.6■■□□□ 1.69
LIMD2-204ENST00000578297 RINT1Q6NUQ1 792 aa25.6■■□□□ 1.69
LIMD2-204ENST00000578297 FOXD4L4Q8WXT5 416 aaPredicted RBP25.6■■□□□ 1.69
LIMD2-204ENST00000578297 KIFAP3Q92845 792 aa25.6■■□□□ 1.69
LIMD2-204ENST00000578297 PLIN2Q99541 437 aa25.6■■□□□ 1.69
LIMD2-204ENST00000578297 C17orf80Q9BSJ5 609 aa25.6■■□□□ 1.69
LIMD2-204ENST00000578297 CCSER1Q9C0I3 900 aa25.6■■□□□ 1.69
LIMD2-204ENST00000578297 CSRNP2Q9H175 543 aa25.6■■□□□ 1.69
LIMD2-204ENST00000578297 INO80B-WBP1J3KQ70 363 aa25.59■■□□□ 1.69
LIMD2-204ENST00000578297 EOMESO95936 686 aa25.59■■□□□ 1.69
LIMD2-204ENST00000578297 HOXA11P31270 313 aaPredicted RBP25.59■■□□□ 1.69
LIMD2-204ENST00000578297 MBTD1Q05BQ5 628 aa25.59■■□□□ 1.69
LIMD2-204ENST00000578297 BECN1Q14457 450 aa25.59■■□□□ 1.69
LIMD2-204ENST00000578297 CDCA2Q69YH5 1023 aaPredicted RBP25.59■■□□□ 1.69
LIMD2-204ENST00000578297 TWF2Q6IBS0 349 aaKnown RBP25.59■■□□□ 1.69
LIMD2-204ENST00000578297 C1orf186Q6ZWK4 172 aa25.59■■□□□ 1.69
LIMD2-204ENST00000578297 SYT2Q8N9I0 419 aaPredicted RBP25.59■■□□□ 1.69
LIMD2-204ENST00000578297 CLP1Q92989 425 aaKnown RBP25.59■■□□□ 1.69
LIMD2-204ENST00000578297 MTUS1Q9ULD2 1270 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms