RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 TRPC6Q9Y210 931 aa14.44□□□□□ -0.1
CTC1-203ENST00000578240 PPME1Q9Y570 386 aa14.44□□□□□ -0.1
CTC1-203ENST00000578240 TRIM17Q9Y577 477 aa14.44□□□□□ -0.1
CTC1-203ENST00000578240 H3BRB1 525 aa14.43□□□□□ -0.1
CTC1-203ENST00000578240 HBP1O60381 514 aa14.43□□□□□ -0.1
CTC1-203ENST00000578240 KIF20AO95235 890 aa14.43□□□□□ -0.1
CTC1-203ENST00000578240 AKR1A1P14550 325 aa14.43□□□□□ -0.1
CTC1-203ENST00000578240 INSRRP14616 1297 aa14.43□□□□□ -0.1
CTC1-203ENST00000578240 SPAG1Q07617 926 aa14.43□□□□□ -0.1
CTC1-203ENST00000578240 MAP4K3Q8IVH8 894 aa14.43□□□□□ -0.1
CTC1-203ENST00000578240 LRRC71Q8N4P6 559 aa14.43□□□□□ -0.1
CTC1-203ENST00000578240 KCNN1Q92952 543 aa14.43□□□□□ -0.1
CTC1-203ENST00000578240 TSG101Q99816 390 aa14.43□□□□□ -0.1
CTC1-203ENST00000578240 TUT1Q9H6E5 874 aaKnown RBP14.43□□□□□ -0.1
CTC1-203ENST00000578240 FAM184BQ9ULE4 1060 aa14.43□□□□□ -0.1
CTC1-203ENST00000578240 COL1A2P08123 1366 aa14.43□□□□□ -0.1
CTC1-203ENST00000578240 NR3C1P04150 777 aa14.42□□□□□ -0.1
CTC1-203ENST00000578240 CDK11BP21127 795 aaKnown RBP14.42□□□□□ -0.1
CTC1-203ENST00000578240 NR2F2P24468 414 aa14.42□□□□□ -0.1
CTC1-203ENST00000578240 MARSP56192 900 aaKnown RBP14.42□□□□□ -0.1
CTC1-203ENST00000578240 FKBP3Q00688 224 aaKnown RBP14.42□□□□□ -0.1
CTC1-203ENST00000578240 BEX3Q00994 111 aa14.42□□□□□ -0.1
CTC1-203ENST00000578240 TBC1D8BQ0IIM8 1120 aa14.42□□□□□ -0.1
CTC1-203ENST00000578240 ALCAMQ13740 583 aa14.42□□□□□ -0.1
CTC1-203ENST00000578240 ARHGEF6Q15052 776 aa14.42□□□□□ -0.1
CTC1-203ENST00000578240 NFIL3Q16649 462 aa14.42□□□□□ -0.1
CTC1-203ENST00000578240 DGKDQ16760 1214 aa14.42□□□□□ -0.1
CTC1-203ENST00000578240 MARCH8Q5T0T0 291 aa14.42□□□□□ -0.1
CTC1-203ENST00000578240 MAP3K21Q5TCX8 1036 aa14.42□□□□□ -0.1
CTC1-203ENST00000578240 SLC39A4Q6P5W5 647 aa14.42□□□□□ -0.1
CTC1-203ENST00000578240 PPP1R13LQ8WUF5 828 aa14.42□□□□□ -0.1
CTC1-203ENST00000578240 KMT5AQ9NQR1 393 aa14.42□□□□□ -0.1
CTC1-203ENST00000578240 AGPAT3Q9NRZ7 376 aa14.42□□□□□ -0.1
CTC1-203ENST00000578240 Q9Y3F1 56 aa14.42□□□□□ -0.1
CTC1-203ENST00000578240 DENND3A2RUS2 1198 aa14.42□□□□□ -0.1
CTC1-203ENST00000578240 CLIC2O15247 247 aa14.42□□□□□ -0.1
CTC1-203ENST00000578240 GJB1P08034 283 aa14.42□□□□□ -0.1
CTC1-203ENST00000578240 CCND3P30281 292 aaPredicted RBP14.42□□□□□ -0.1
CTC1-203ENST00000578240 CASP4P49662 377 aa14.42□□□□□ -0.1
CTC1-203ENST00000578240 HIC1Q14526 733 aa14.42□□□□□ -0.1
CTC1-203ENST00000578240 KIF22Q14807 665 aa14.42□□□□□ -0.1
CTC1-203ENST00000578240 MFSD14CQ5VZR4 134 aa14.42□□□□□ -0.1
CTC1-203ENST00000578240 CEP63Q96MT8 703 aa14.42□□□□□ -0.1
CTC1-203ENST00000578240 UPF3AQ9H1J1 476 aaKnown RBP14.42□□□□□ -0.1
CTC1-203ENST00000578240 VPS16Q9H269 839 aa14.42□□□□□ -0.1
CTC1-203ENST00000578240 KCNF1Q9H3M0 494 aa14.42□□□□□ -0.1
CTC1-203ENST00000578240 DMAC2Q9NW81 257 aa14.42□□□□□ -0.1
CTC1-203ENST00000578240 PCDHB13Q9Y5F0 798 aa14.42□□□□□ -0.1
CTC1-203ENST00000578240 CCDC169A6NNP5 214 aa14.41□□□□□ -0.1
CTC1-203ENST00000578240 LGALS16A8MUM7 142 aa14.41□□□□□ -0.1
CTC1-203ENST00000578240 HAS3O00219 553 aa14.41□□□□□ -0.1
CTC1-203ENST00000578240 CBFA2T2O43439 604 aa14.41□□□□□ -0.1
CTC1-203ENST00000578240 DUSP11O75319 330 aaKnown RBP14.41□□□□□ -0.1
CTC1-203ENST00000578240 AKAP3O75969 853 aa14.41□□□□□ -0.1
CTC1-203ENST00000578240 PRKAR2AP13861 404 aaKnown RBP14.41□□□□□ -0.1
CTC1-203ENST00000578240 NAMPTP43490 491 aa14.41□□□□□ -0.1
CTC1-203ENST00000578240 CLCN3P51790 818 aa14.41□□□□□ -0.1
CTC1-203ENST00000578240 ARID5BQ14865 1188 aa14.41□□□□□ -0.1
CTC1-203ENST00000578240 TMC6Q7Z403 805 aa14.41□□□□□ -0.1
CTC1-203ENST00000578240 ZSWIM2Q8NEG5 633 aa14.41□□□□□ -0.1
CTC1-203ENST00000578240 HVCN1Q96D96 273 aa14.41□□□□□ -0.1
CTC1-203ENST00000578240 TUBGCP2Q9BSJ2 902 aa14.41□□□□□ -0.1
CTC1-203ENST00000578240 GBP3Q9H0R5 595 aa14.41□□□□□ -0.1
CTC1-203ENST00000578240 ZNF215Q9UL58 517 aaPredicted RBP14.41□□□□□ -0.1
CTC1-203ENST00000578240 TBX20Q9UMR3 447 aa14.41□□□□□ -0.1
CTC1-203ENST00000578240 SEPT4O43236 478 aa14.4□□□□□ -0.1
CTC1-203ENST00000578240 GAS2O43903 313 aaKnown RBP14.4□□□□□ -0.1
CTC1-203ENST00000578240 ADAMTS4O75173 837 aa14.4□□□□□ -0.1
CTC1-203ENST00000578240 RGS19P49795 217 aa14.4□□□□□ -0.1
CTC1-203ENST00000578240 GJA9P57773 515 aa14.4□□□□□ -0.1
CTC1-203ENST00000578240 IGBP1P78318 339 aa14.4□□□□□ -0.1
CTC1-203ENST00000578240 NKX3-2P78367 333 aa14.4□□□□□ -0.1
CTC1-203ENST00000578240 TBX2Q13207 712 aaPredicted RBP14.4□□□□□ -0.1
CTC1-203ENST00000578240 ADAM9Q13443 819 aa14.4□□□□□ -0.1
CTC1-203ENST00000578240 FSCN1Q16658 493 aaKnown RBP14.4□□□□□ -0.1
CTC1-203ENST00000578240 ZNF484Q5JVG2 852 aa14.4□□□□□ -0.1
CTC1-203ENST00000578240 CEP135Q66GS9 1140 aa14.4□□□□□ -0.1
CTC1-203ENST00000578240 CDCA2Q69YH5 1023 aaPredicted RBP14.4□□□□□ -0.1
CTC1-203ENST00000578240 STXBP4Q6ZWJ1 553 aa14.4□□□□□ -0.1
CTC1-203ENST00000578240 FILIP1Q7Z7B0 1213 aa14.4□□□□□ -0.1
CTC1-203ENST00000578240 FAM114A1Q8IWE2 563 aa14.4□□□□□ -0.1
CTC1-203ENST00000578240 TRIM59Q8IWR1 403 aa14.4□□□□□ -0.1
CTC1-203ENST00000578240 TMEM174Q8WUU8 243 aa14.4□□□□□ -0.1
CTC1-203ENST00000578240 LMBR1Q8WVP7 490 aa14.4□□□□□ -0.1
CTC1-203ENST00000578240 PRPF31Q8WWY3 499 aaKnown RBP14.4□□□□□ -0.1
CTC1-203ENST00000578240 BORCS6Q96GS4 357 aa14.4□□□□□ -0.1
CTC1-203ENST00000578240 ACCSQ96QU6 501 aa14.4□□□□□ -0.1
CTC1-203ENST00000578240 CTAGE1Q96RT6 745 aa14.4□□□□□ -0.1
CTC1-203ENST00000578240 CCDC113Q9H0I3 377 aa14.4□□□□□ -0.1
CTC1-203ENST00000578240 ANKRD63C9JTQ0 380 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 CALUO43852 315 aaPredicted RBP14.39□□□□□ -0.11
CTC1-203ENST00000578240 ADCY3O60266 1144 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 HMGCRP04035 888 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 ADSSP30520 456 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 HOXC8P31273 242 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 CPT1AP50416 773 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 PURAQ00577 322 aaKnown RBP14.39□□□□□ -0.11
CTC1-203ENST00000578240 PPFIA1Q13136 1202 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 GRIK4Q16099 956 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 CCDC186Q7Z3E2 898 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms