RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 CNTNAP2Q9UHC6 1331 aa12.66□□□□□ -0.38
SMARCE1-214ENST00000578112 GALR2O43603 387 aaPredicted RBP12.66□□□□□ -0.38
SMARCE1-214ENST00000578112 GAS2O43903 313 aaKnown RBP12.66□□□□□ -0.38
SMARCE1-214ENST00000578112 CLASP2O75122 1294 aaKnown RBP12.66□□□□□ -0.38
SMARCE1-214ENST00000578112 VTNP04004 478 aa12.66□□□□□ -0.38
SMARCE1-214ENST00000578112 FGD1P98174 961 aa12.66□□□□□ -0.38
SMARCE1-214ENST00000578112 FOXK2Q01167 660 aa12.66□□□□□ -0.38
SMARCE1-214ENST00000578112 PRKCEQ02156 737 aa12.66□□□□□ -0.38
SMARCE1-214ENST00000578112 TBC1D8BQ0IIM8 1120 aa12.66□□□□□ -0.38
SMARCE1-214ENST00000578112 TCF15Q12870 199 aa12.66□□□□□ -0.38
SMARCE1-214ENST00000578112 PRR16Q569H4 304 aa12.66□□□□□ -0.38
SMARCE1-214ENST00000578112 RAB11FIP4Q86YS3 637 aa12.66□□□□□ -0.38
SMARCE1-214ENST00000578112 GPR65Q8IYL9 337 aa12.66□□□□□ -0.38
SMARCE1-214ENST00000578112 RPGRIP1Q96KN7 1286 aa12.66□□□□□ -0.38
SMARCE1-214ENST00000578112 ZBP1Q9H171 429 aa12.66□□□□□ -0.38
SMARCE1-214ENST00000578112 GINS2Q9Y248 185 aa12.66□□□□□ -0.38
SMARCE1-214ENST00000578112 GAS7O60861 476 aa12.65□□□□□ -0.38
SMARCE1-214ENST00000578112 CTSAP10619 480 aa12.65□□□□□ -0.38
SMARCE1-214ENST00000578112 ALDH7A1P49419 539 aaKnown RBP12.65□□□□□ -0.38
SMARCE1-214ENST00000578112 B3GNT9Q6UX72 402 aa12.65□□□□□ -0.38
SMARCE1-214ENST00000578112 TMC7Q7Z402 723 aa12.65□□□□□ -0.38
SMARCE1-214ENST00000578112 CNNM3Q8NE01 707 aa12.65□□□□□ -0.38
SMARCE1-214ENST00000578112 TMEM169Q96HH4 297 aa12.65□□□□□ -0.38
SMARCE1-214ENST00000578112 DPP7Q9UHL4 492 aa12.65□□□□□ -0.38
SMARCE1-214ENST00000578112 SAMM50Q9Y512 469 aa12.65□□□□□ -0.38
SMARCE1-214ENST00000578112 PAPLNO95428 1278 aa12.65□□□□□ -0.38
SMARCE1-214ENST00000578112 CLCN3P51790 818 aa12.65□□□□□ -0.38
SMARCE1-214ENST00000578112 CLLU1OSQ5K130 101 aa12.65□□□□□ -0.38
SMARCE1-214ENST00000578112 BLOC1S2Q6QNY1 142 aa12.65□□□□□ -0.38
SMARCE1-214ENST00000578112 UBN1Q9NPG3 1134 aa12.65□□□□□ -0.38
SMARCE1-214ENST00000578112 KANSL3Q9P2N6 904 aa12.65□□□□□ -0.38
SMARCE1-214ENST00000578112 TECTAO75443 2155 aa12.64□□□□□ -0.39
SMARCE1-214ENST00000578112 PER2O15055 1255 aa12.64□□□□□ -0.39
SMARCE1-214ENST00000578112 MSH4O15457 936 aa12.64□□□□□ -0.39
SMARCE1-214ENST00000578112 PSMD10O75832 226 aa12.64□□□□□ -0.39
SMARCE1-214ENST00000578112 HSPA4P34932 840 aa12.64□□□□□ -0.39
SMARCE1-214ENST00000578112 PHKA2P46019 1235 aa12.64□□□□□ -0.39
SMARCE1-214ENST00000578112 LRCH2Q5VUJ6 765 aa12.64□□□□□ -0.39
SMARCE1-214ENST00000578112 TDRD5Q8NAT2 981 aaKnown RBP12.64□□□□□ -0.39
SMARCE1-214ENST00000578112 CMASQ8NFW8 434 aaPredicted RBP12.64□□□□□ -0.39
SMARCE1-214ENST00000578112 HDAC7Q8WUI4 952 aa12.64□□□□□ -0.39
SMARCE1-214ENST00000578112 CCDC136Q96JN2 1154 aa12.64□□□□□ -0.39
SMARCE1-214ENST00000578112 SFXN1Q9H9B4 322 aa12.64□□□□□ -0.39
SMARCE1-214ENST00000578112 ZNF862O60290 1169 aa12.64□□□□□ -0.39
SMARCE1-214ENST00000578112 MAFO75444 373 aaPredicted RBP12.64□□□□□ -0.39
SMARCE1-214ENST00000578112 CLCN5P51795 746 aa12.64□□□□□ -0.39
SMARCE1-214ENST00000578112 BCAR1P56945 870 aa12.64□□□□□ -0.39
SMARCE1-214ENST00000578112 COL9A3Q14050 684 aaPredicted RBP12.64□□□□□ -0.39
SMARCE1-214ENST00000578112 NTRK3Q16288 839 aa12.64□□□□□ -0.39
SMARCE1-214ENST00000578112 ATAT1Q5SQI0 421 aa12.64□□□□□ -0.39
SMARCE1-214ENST00000578112 GLB1LQ6UWU2 654 aa12.64□□□□□ -0.39
SMARCE1-214ENST00000578112 MIER3Q7Z3K6 550 aa12.64□□□□□ -0.39
SMARCE1-214ENST00000578112 RASEFQ8IZ41 740 aa12.64□□□□□ -0.39
SMARCE1-214ENST00000578112 SLC22A17Q8WUG5 538 aa12.64□□□□□ -0.39
SMARCE1-214ENST00000578112 CCDC51Q96ER9 411 aa12.64□□□□□ -0.39
SMARCE1-214ENST00000578112 CEP89Q96ST8 783 aa12.64□□□□□ -0.39
SMARCE1-214ENST00000578112 HCFC2Q9Y5Z7 792 aa12.64□□□□□ -0.39
SMARCE1-214ENST00000578112 INPPL1O15357 1258 aa12.63□□□□□ -0.39
SMARCE1-214ENST00000578112 PPFIA3O75145 1194 aa12.63□□□□□ -0.39
SMARCE1-214ENST00000578112 RPS6KB1P23443 525 aa12.63□□□□□ -0.39
SMARCE1-214ENST00000578112 ADD1P35611 737 aaKnown RBP12.63□□□□□ -0.39
SMARCE1-214ENST00000578112 ADCK5Q3MIX3 580 aa12.63□□□□□ -0.39
SMARCE1-214ENST00000578112 Q6ZUG5 572 aa12.63□□□□□ -0.39
SMARCE1-214ENST00000578112 SRGAP1Q7Z6B7 1085 aa12.63□□□□□ -0.39
SMARCE1-214ENST00000578112 MRPL10Q7Z7H8 261 aaKnown RBP12.63□□□□□ -0.39
SMARCE1-214ENST00000578112 ZBTB33Q86T24 672 aa12.63□□□□□ -0.39
SMARCE1-214ENST00000578112 TRIM22Q8IYM9 498 aa12.63□□□□□ -0.39
SMARCE1-214ENST00000578112 URGCPQ8TCY9 931 aa12.63□□□□□ -0.39
SMARCE1-214ENST00000578112 NLRP7Q8WX94 980 aa12.63□□□□□ -0.39
SMARCE1-214ENST00000578112 EMILIN2Q9BXX0 1053 aa12.63□□□□□ -0.39
SMARCE1-214ENST00000578112 PCDHA4Q9UN74 947 aa12.63□□□□□ -0.39
SMARCE1-214ENST00000578112 PCDHGC5Q9Y5F6 944 aa12.63□□□□□ -0.39
SMARCE1-214ENST00000578112 ASAP2O43150 1006 aa12.63□□□□□ -0.39
SMARCE1-214ENST00000578112 RFC5P40937 340 aa12.63□□□□□ -0.39
SMARCE1-214ENST00000578112 NBL1P41271 181 aa12.63□□□□□ -0.39
SMARCE1-214ENST00000578112 KREMEN2Q8NCW0 462 aa12.63□□□□□ -0.39
SMARCE1-214ENST00000578112 BORCS6Q96GS4 357 aa12.63□□□□□ -0.39
SMARCE1-214ENST00000578112 IGSF21Q96ID5 467 aa12.63□□□□□ -0.39
SMARCE1-214ENST00000578112 SCLT1Q96NL6 688 aa12.63□□□□□ -0.39
SMARCE1-214ENST00000578112 UNC45AQ9H3U1 944 aa12.63□□□□□ -0.39
SMARCE1-214ENST00000578112 HIDE1A8MVS5 230 aa12.62□□□□□ -0.39
SMARCE1-214ENST00000578112 TBX3O15119 743 aa12.62□□□□□ -0.39
SMARCE1-214ENST00000578112 CXCL14O95715 111 aa12.62□□□□□ -0.39
SMARCE1-214ENST00000578112 GCFC2P16383 781 aaKnown RBP12.62□□□□□ -0.39
SMARCE1-214ENST00000578112 AXLP30530 894 aa12.62□□□□□ -0.39
SMARCE1-214ENST00000578112 PSMC5P62195 406 aa12.62□□□□□ -0.39
SMARCE1-214ENST00000578112 NOMO2Q5JPE7 1267 aa12.62□□□□□ -0.39
SMARCE1-214ENST00000578112 C15orf39Q6ZRI6 1047 aa12.62□□□□□ -0.39
SMARCE1-214ENST00000578112 HELQQ8TDG4 1101 aa12.62□□□□□ -0.39
SMARCE1-214ENST00000578112 NXPE3Q969Y0 559 aa12.62□□□□□ -0.39
SMARCE1-214ENST00000578112 STBD1O95210 358 aa12.62□□□□□ -0.39
SMARCE1-214ENST00000578112 DEXIO95424 95 aa12.62□□□□□ -0.39
SMARCE1-214ENST00000578112 APOBRQ0VD83 1088 aa12.62□□□□□ -0.39
SMARCE1-214ENST00000578112 CPLX2Q6PUV4 134 aaKnown RBP12.62□□□□□ -0.39
SMARCE1-214ENST00000578112 OTOP3Q7RTS5 596 aa12.62□□□□□ -0.39
SMARCE1-214ENST00000578112 KRT25Q7Z3Z0 450 aa12.62□□□□□ -0.39
SMARCE1-214ENST00000578112 TCP11Q8WWU5 503 aa12.62□□□□□ -0.39
SMARCE1-214ENST00000578112 ACSF2Q96CM8 615 aaPredicted RBP12.62□□□□□ -0.39
SMARCE1-214ENST00000578112 FAM20AQ96MK3 541 aa12.62□□□□□ -0.39
SMARCE1-214ENST00000578112 FAM105AQ9NUU6 356 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms