RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 CDCA3Q99618 268 aaPredicted RBP17.99■□□□□ 0.47
VAPA-204ENST00000577901 PHF7Q9BWX1 381 aaPredicted RBP17.99■□□□□ 0.47
VAPA-204ENST00000577901 CWH43Q9H720 699 aa17.99■□□□□ 0.47
VAPA-204ENST00000577901 ELAC1Q9H777 363 aaKnown RBP17.99■□□□□ 0.47
VAPA-204ENST00000577901 PIEZO1Q92508 2521 aa17.98■□□□□ 0.47
VAPA-204ENST00000577901 TMEM221A6NGB7 291 aa17.98■□□□□ 0.47
VAPA-204ENST00000577901 M0R296 226 aa17.98■□□□□ 0.47
VAPA-204ENST00000577901 LAG3P18627 525 aa17.98■□□□□ 0.47
VAPA-204ENST00000577901 SFNP31947 248 aa17.98■□□□□ 0.47
VAPA-204ENST00000577901 DSC3Q14574 896 aa17.98■□□□□ 0.47
VAPA-204ENST00000577901 EARS2Q5JPH6 523 aaKnown RBP17.98■□□□□ 0.47
VAPA-204ENST00000577901 FBXO18Q8NFZ0 1043 aa17.98■□□□□ 0.47
VAPA-204ENST00000577901 TNFRSF25Q93038 417 aa17.98■□□□□ 0.47
VAPA-204ENST00000577901 FAM20AQ96MK3 541 aa17.98■□□□□ 0.47
VAPA-204ENST00000577901 DISC1Q9NRI5 854 aa17.98■□□□□ 0.47
VAPA-204ENST00000577901 CEP131Q9UPN4 1083 aa17.98■□□□□ 0.47
VAPA-204ENST00000577901 FNDC1Q4ZHG4 1894 aaPredicted RBP17.97■□□□□ 0.47
VAPA-204ENST00000577901 FSCN2O14926 492 aa17.97■□□□□ 0.47
VAPA-204ENST00000577901 PSMD10O75832 226 aa17.97■□□□□ 0.47
VAPA-204ENST00000577901 CD2BP2O95400 341 aaKnown RBP17.97■□□□□ 0.47
VAPA-204ENST00000577901 JAK3P52333 1124 aa17.97■□□□□ 0.47
VAPA-204ENST00000577901 ZXDAP98168 799 aa17.97■□□□□ 0.47
VAPA-204ENST00000577901 GNL2Q13823 731 aaKnown RBP17.97■□□□□ 0.47
VAPA-204ENST00000577901 ETNPPLQ8TBG4 499 aa17.97■□□□□ 0.47
VAPA-204ENST00000577901 PBXIP1Q96AQ6 731 aa17.97■□□□□ 0.47
VAPA-204ENST00000577901 RPGRIP1Q96KN7 1286 aa17.97■□□□□ 0.47
VAPA-204ENST00000577901 FOXP1Q9H334 677 aaPredicted RBP17.97■□□□□ 0.47
VAPA-204ENST00000577901 GABBR1Q9UBS5 961 aa17.97■□□□□ 0.47
VAPA-204ENST00000577901 LZTS1Q9Y250 596 aa17.97■□□□□ 0.47
VAPA-204ENST00000577901 TBX3O15119 743 aa17.96■□□□□ 0.47
VAPA-204ENST00000577901 MAGEB2O15479 319 aa17.96■□□□□ 0.47
VAPA-204ENST00000577901 CHMP2AO43633 222 aa17.96■□□□□ 0.47
VAPA-204ENST00000577901 SLC37A4O43826 429 aa17.96■□□□□ 0.47
VAPA-204ENST00000577901 BAG4O95429 457 aaKnown RBP17.96■□□□□ 0.47
VAPA-204ENST00000577901 SRGAP2BP0DMP2 458 aa17.96■□□□□ 0.47
VAPA-204ENST00000577901 ATF7P17544 494 aaPredicted RBP17.96■□□□□ 0.47
VAPA-204ENST00000577901 CLCN3P51790 818 aa17.96■□□□□ 0.47
VAPA-204ENST00000577901 PLCB3Q01970 1234 aa17.96■□□□□ 0.47
VAPA-204ENST00000577901 PLPP4Q5VZY2 271 aa17.96■□□□□ 0.47
VAPA-204ENST00000577901 RDM1Q8NG50 284 aa17.96■□□□□ 0.47
VAPA-204ENST00000577901 SUSD6Q92537 303 aa17.96■□□□□ 0.47
VAPA-204ENST00000577901 MRPS27Q92552 414 aaKnown RBP17.96■□□□□ 0.47
VAPA-204ENST00000577901 TMEM117Q9H0C3 514 aa17.96■□□□□ 0.47
VAPA-204ENST00000577901 UNC45AQ9H3U1 944 aa17.96■□□□□ 0.47
VAPA-204ENST00000577901 PUF60Q9UHX1 559 aaKnown RBP17.96■□□□□ 0.47
VAPA-204ENST00000577901 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.96■□□□□ 0.47
VAPA-204ENST00000577901 FAM205CA6NFA0 338 aa17.95■□□□□ 0.46
VAPA-204ENST00000577901 HOXA2O43364 376 aa17.95■□□□□ 0.46
VAPA-204ENST00000577901 NLRP11P59045 1033 aaKnown RBP17.95■□□□□ 0.46
VAPA-204ENST00000577901 KCNC3Q14003 757 aa17.95■□□□□ 0.46
VAPA-204ENST00000577901 EFCAB12Q6NXP0 572 aa17.95■□□□□ 0.46
VAPA-204ENST00000577901 TMEM184AQ6ZMB5 413 aa17.95■□□□□ 0.46
VAPA-204ENST00000577901 LRRC55Q6ZSA7 311 aa17.95■□□□□ 0.46
VAPA-204ENST00000577901 MIER3Q7Z3K6 550 aa17.95■□□□□ 0.46
VAPA-204ENST00000577901 SLFN12Q8IYM2 578 aa17.95■□□□□ 0.46
VAPA-204ENST00000577901 ABI1Q8IZP0 508 aa17.95■□□□□ 0.46
VAPA-204ENST00000577901 GJA10Q969M2 543 aa17.95■□□□□ 0.46
VAPA-204ENST00000577901 FAM167AQ96KS9 214 aa17.95■□□□□ 0.46
VAPA-204ENST00000577901 CASD1Q96PB1 797 aa17.95■□□□□ 0.46
VAPA-204ENST00000577901 MAP7D2Q96T17 732 aa17.95■□□□□ 0.46
VAPA-204ENST00000577901 TCF25Q9BQ70 676 aa17.95■□□□□ 0.46
VAPA-204ENST00000577901 ADAMTS10Q9H324 1103 aa17.95■□□□□ 0.46
VAPA-204ENST00000577901 KCNMB3Q9NPA1 279 aa17.95■□□□□ 0.46
VAPA-204ENST00000577901 ENTPD7Q9NQZ7 604 aa17.95■□□□□ 0.46
VAPA-204ENST00000577901 AKT3Q9Y243 479 aa17.95■□□□□ 0.46
VAPA-204ENST00000577901 ZSCAN20P17040 1043 aaPredicted RBP17.94■□□□□ 0.46
VAPA-204ENST00000577901 EIF4BP23588 611 aaKnown RBP17.94■□□□□ 0.46
VAPA-204ENST00000577901 TMOD1P28289 359 aa17.94■□□□□ 0.46
VAPA-204ENST00000577901 TECP42680 631 aa17.94■□□□□ 0.46
VAPA-204ENST00000577901 IER5LQ5T953 404 aa17.94■□□□□ 0.46
VAPA-204ENST00000577901 ANKRD54Q6NXT1 300 aa17.94■□□□□ 0.46
VAPA-204ENST00000577901 KCNT2Q6UVM3 1135 aa17.94■□□□□ 0.46
VAPA-204ENST00000577901 SUGP1Q8IWZ8 645 aaKnown RBP17.94■□□□□ 0.46
VAPA-204ENST00000577901 LRRC43Q8N309 656 aa17.94■□□□□ 0.46
VAPA-204ENST00000577901 LRRC71Q8N4P6 559 aa17.94■□□□□ 0.46
VAPA-204ENST00000577901 LINC01465Q8N7H1 131 aa17.94■□□□□ 0.46
VAPA-204ENST00000577901 PRSS33Q8NF86 280 aa17.94■□□□□ 0.46
VAPA-204ENST00000577901 ZNF558Q96NG5 402 aa17.94■□□□□ 0.46
VAPA-204ENST00000577901 S1PR5Q9H228 398 aa17.94■□□□□ 0.46
VAPA-204ENST00000577901 NGRNQ9NPE2 291 aaKnown RBP17.94■□□□□ 0.46
VAPA-204ENST00000577901 NRBP2Q9NSY0 501 aa17.94■□□□□ 0.46
VAPA-204ENST00000577901 RNF19AQ9NV58 838 aa17.94■□□□□ 0.46
VAPA-204ENST00000577901 SMC3Q9UQE7 1217 aa17.94■□□□□ 0.46
VAPA-204ENST00000577901 TECTAO75443 2155 aa17.93■□□□□ 0.46
VAPA-204ENST00000577901 HIDE1A8MVS5 230 aa17.93■□□□□ 0.46
VAPA-204ENST00000577901 OATP04181 439 aa17.93■□□□□ 0.46
VAPA-204ENST00000577901 PBX3P40426 434 aa17.93■□□□□ 0.46
VAPA-204ENST00000577901 KRT17Q04695 432 aa17.93■□□□□ 0.46
VAPA-204ENST00000577901 LLGL2Q6P1M3 1020 aa17.93■□□□□ 0.46
VAPA-204ENST00000577901 ECHDC2Q86YB7 292 aa17.93■□□□□ 0.46
VAPA-204ENST00000577901 ZNF710Q8N1W2 664 aa17.93■□□□□ 0.46
VAPA-204ENST00000577901 RNF169Q8NCN4 708 aa17.93■□□□□ 0.46
VAPA-204ENST00000577901 ZNF318Q5VUA4 2279 aa17.93■□□□□ 0.46
VAPA-204ENST00000577901 EVPLQ92817 2033 aa17.93■□□□□ 0.46
VAPA-204ENST00000577901 ZNF862O60290 1169 aa17.92■□□□□ 0.46
VAPA-204ENST00000577901 ATP2B1P20020 1258 aa17.92■□□□□ 0.46
VAPA-204ENST00000577901 GJB2P29033 226 aa17.92■□□□□ 0.46
VAPA-204ENST00000577901 PPM1AP35813 382 aa17.92■□□□□ 0.46
VAPA-204ENST00000577901 PTPN5P54829 565 aa17.92■□□□□ 0.46
VAPA-204ENST00000577901 SIGLEC14Q08ET2 396 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms