RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 PASD1Q8IV76 773 aa11.68□□□□□ -0.54
RNF43-203ENST00000577716 RNF25Q96BH1 459 aaPredicted RBP11.68□□□□□ -0.54
RNF43-203ENST00000577716 ZIM3Q96PE6 472 aa11.68□□□□□ -0.54
RNF43-203ENST00000577716 ZNF341Q9BYN7 854 aa11.68□□□□□ -0.54
RNF43-203ENST00000577716 ZNF408Q9H9D4 720 aa11.68□□□□□ -0.54
RNF43-203ENST00000577716 GINM1Q9NU53 330 aa11.68□□□□□ -0.54
RNF43-203ENST00000577716 NOP53Q9NZM5 478 aaKnown RBP11.68□□□□□ -0.54
RNF43-203ENST00000577716 EHD2Q9NZN4 543 aa11.68□□□□□ -0.54
RNF43-203ENST00000577716 A0A1W2PQJ5 194 aa11.68□□□□□ -0.54
RNF43-203ENST00000577716 PLS3P13797 630 aa11.68□□□□□ -0.54
RNF43-203ENST00000577716 SERPINB6P35237 376 aa11.68□□□□□ -0.54
RNF43-203ENST00000577716 NFIXQ14938 502 aa11.68□□□□□ -0.54
RNF43-203ENST00000577716 MUM1L1Q5H9M0 696 aa11.68□□□□□ -0.54
RNF43-203ENST00000577716 CDKAL1Q5VV42 579 aa11.68□□□□□ -0.54
RNF43-203ENST00000577716 TRIM65Q6PJ69 517 aa11.68□□□□□ -0.54
RNF43-203ENST00000577716 SCARA5Q6ZMJ2 495 aa11.68□□□□□ -0.54
RNF43-203ENST00000577716 PODNQ7Z5L7 613 aa11.68□□□□□ -0.54
RNF43-203ENST00000577716 TRIM42Q8IWZ5 723 aa11.68□□□□□ -0.54
RNF43-203ENST00000577716 MMGT1Q8N4V1 131 aa11.68□□□□□ -0.54
RNF43-203ENST00000577716 MARCH10Q8NA82 808 aaPredicted RBP11.68□□□□□ -0.54
RNF43-203ENST00000577716 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.68□□□□□ -0.54
RNF43-203ENST00000577716 LXNQ9BS40 222 aa11.68□□□□□ -0.54
RNF43-203ENST00000577716 GOLPH3Q9H4A6 298 aa11.68□□□□□ -0.54
RNF43-203ENST00000577716 PLEKHG2Q9H7P9 1386 aa11.68□□□□□ -0.54
RNF43-203ENST00000577716 CPP00450 1065 aa11.68□□□□□ -0.54
RNF43-203ENST00000577716 TRAPPC11Q7Z392 1133 aa11.68□□□□□ -0.54
RNF43-203ENST00000577716 ERICH1Q86X53 443 aa11.68□□□□□ -0.54
RNF43-203ENST00000577716 FBXL16Q8N461 479 aa11.68□□□□□ -0.54
RNF43-203ENST00000577716 KCTD6Q8NC69 237 aa11.68□□□□□ -0.54
RNF43-203ENST00000577716 MSTO1Q9BUK6 570 aa11.68□□□□□ -0.54
RNF43-203ENST00000577716 FLT1P17948 1338 aa11.68□□□□□ -0.54
RNF43-203ENST00000577716 RAD51CO43502 376 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 PSAPP07602 524 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 DDX42Q86XP3 938 aaKnown RBP eCLIP11.67□□□□□ -0.54
RNF43-203ENST00000577716 OR2W6PQ8NHA6 318 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 ANKS1AQ92625 1134 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 RMDN3Q96TC7 470 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 EPN3Q9H201 632 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 BCS1LQ9Y276 419 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 PFASO15067 1338 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 DENND3A2RUS2 1198 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 TJP3O95049 919 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 P4HBP07237 508 aaKnown RBP11.67□□□□□ -0.54
RNF43-203ENST00000577716 PDHBP11177 359 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 ESRRAP11474 423 aaPredicted RBP11.67□□□□□ -0.54
RNF43-203ENST00000577716 LSP1P33241 339 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 QARSP47897 775 aaKnown RBP11.67□□□□□ -0.54
RNF43-203ENST00000577716 CASP7P55210 303 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 DHX34Q14147 1143 aaKnown RBP11.67□□□□□ -0.54
RNF43-203ENST00000577716 EDRF1Q3B7T1 1238 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 WDR93Q6P2C0 686 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 SAAL1Q96ER3 474 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 SCYL1Q96KG9 808 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 RIOK1Q9BRS2 568 aaKnown RBP11.67□□□□□ -0.54
RNF43-203ENST00000577716 TRIM51Q9BSJ1 452 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 DAGLAQ9Y4D2 1042 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 KDM6AO15550 1401 aaPredicted RBP11.67□□□□□ -0.54
RNF43-203ENST00000577716 CCND2P30279 289 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 BYSLQ13895 437 aaKnown RBP11.67□□□□□ -0.54
RNF43-203ENST00000577716 TFDP1Q14186 410 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 KRT39Q6A163 491 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 TMEM270Q6UE05 265 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 PDZD4Q76G19 769 aaPredicted RBP11.67□□□□□ -0.54
RNF43-203ENST00000577716 EEPD1Q7L9B9 569 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 C1orf54Q8WWF1 131 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 REEP2Q9BRK0 252 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 FAM213AQ9BRX8 229 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 ABCB11O95342 1321 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 WDR64B1ANS9 1081 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 H0Y3Z8 333 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 CASQ2O14958 399 aaPredicted RBP11.67□□□□□ -0.54
RNF43-203ENST00000577716 ABCD1P33897 745 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 SEC24CP53992 1094 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 SEC23AQ15436 765 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 NAB2Q15742 525 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 FBXW10Q5XX13 1052 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 OR6B2Q6IFH4 312 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 TTI2Q6NXR4 508 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 MCPH1Q8NEM0 835 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 ZNF473Q8WTR7 871 aaKnown RBP11.67□□□□□ -0.54
RNF43-203ENST00000577716 DNAJC7Q99615 494 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 WNT8AQ9H1J5 351 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 ZWILCHQ9H900 591 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 TRPC5Q9UL62 973 aaPredicted RBP11.67□□□□□ -0.54
RNF43-203ENST00000577716 CAPN6Q9Y6Q1 641 aa11.67□□□□□ -0.54
RNF43-203ENST00000577716 GRM1Q13255 1194 aa11.66□□□□□ -0.54
RNF43-203ENST00000577716 NKX1-1Q15270 411 aaPredicted RBP11.66□□□□□ -0.54
RNF43-203ENST00000577716 TAF12Q16514 161 aa11.66□□□□□ -0.54
RNF43-203ENST00000577716 KIAA1755Q5JYT7 1200 aa11.66□□□□□ -0.54
RNF43-203ENST00000577716 EPM2AIP1Q7L775 607 aaPredicted RBP11.66□□□□□ -0.54
RNF43-203ENST00000577716 TMEM35BQ8NCS4 154 aa11.66□□□□□ -0.54
RNF43-203ENST00000577716 RBM41Q96IZ5 413 aaKnown RBP11.66□□□□□ -0.54
RNF43-203ENST00000577716 DMGDHQ9UI17 866 aaKnown RBP11.66□□□□□ -0.54
RNF43-203ENST00000577716 SALL1Q9NSC2 1324 aa11.66□□□□□ -0.54
RNF43-203ENST00000577716 A0A0G2JND7 137 aa11.66□□□□□ -0.54
RNF43-203ENST00000577716 SRGAP2CP0DJJ0 459 aa11.66□□□□□ -0.54
RNF43-203ENST00000577716 CAV1Q03135 178 aa11.66□□□□□ -0.54
RNF43-203ENST00000577716 COL9A3Q14050 684 aaPredicted RBP11.66□□□□□ -0.54
RNF43-203ENST00000577716 RPS6KA2Q15349 733 aa11.66□□□□□ -0.54
RNF43-203ENST00000577716 GADL1Q6ZQY3 521 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms