RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 TWF2Q6IBS0 349 aaKnown RBP15.98■□□□□ 0.15
SMARCD2-205ENST00000577686 SYCE2Q6PIF2 218 aa15.98■□□□□ 0.15
SMARCD2-205ENST00000577686 LRRC55Q6ZSA7 311 aa15.98■□□□□ 0.15
SMARCD2-205ENST00000577686 PPFIBP1Q86W92 1011 aa15.98■□□□□ 0.15
SMARCD2-205ENST00000577686 PRSS33Q8NF86 280 aa15.98■□□□□ 0.15
SMARCD2-205ENST00000577686 LENG9Q96B70 501 aa15.98■□□□□ 0.15
SMARCD2-205ENST00000577686 PGBD4Q96DM1 585 aa15.98■□□□□ 0.15
SMARCD2-205ENST00000577686 APOL5Q9BWW9 433 aa15.98■□□□□ 0.15
SMARCD2-205ENST00000577686 ADAM7Q9H2U9 754 aa15.98■□□□□ 0.15
SMARCD2-205ENST00000577686 SORCS3Q9UPU3 1222 aa15.98■□□□□ 0.15
SMARCD2-205ENST00000577686 LOXHD1Q8IVV2 1947 aa15.98■□□□□ 0.15
SMARCD2-205ENST00000577686 C2orf71A6NGG8 1288 aa15.97■□□□□ 0.15
SMARCD2-205ENST00000577686 HIDE1A8MVS5 230 aa15.97■□□□□ 0.15
SMARCD2-205ENST00000577686 ST18O60284 1047 aa15.97■□□□□ 0.15
SMARCD2-205ENST00000577686 ZNF862O60290 1169 aa15.97■□□□□ 0.15
SMARCD2-205ENST00000577686 RPS6KB1P23443 525 aa15.97■□□□□ 0.15
SMARCD2-205ENST00000577686 HSPA4P34932 840 aa15.97■□□□□ 0.15
SMARCD2-205ENST00000577686 BCAR1P56945 870 aa15.97■□□□□ 0.15
SMARCD2-205ENST00000577686 RBM10P98175 930 aaKnown RBP15.97■□□□□ 0.15
SMARCD2-205ENST00000577686 RNASELQ05823 741 aaKnown RBP15.97■□□□□ 0.15
SMARCD2-205ENST00000577686 SSRP1Q08945 709 aaKnown RBP15.97■□□□□ 0.15
SMARCD2-205ENST00000577686 Q4G0T1 1027 aa15.97■□□□□ 0.15
SMARCD2-205ENST00000577686 CLLU1OSQ5K130 101 aa15.97■□□□□ 0.15
SMARCD2-205ENST00000577686 GALNT17Q6IS24 598 aa15.97■□□□□ 0.15
SMARCD2-205ENST00000577686 ELMSAN1Q6PJG2 1045 aa15.97■□□□□ 0.15
SMARCD2-205ENST00000577686 PLCD3Q8N3E9 789 aa15.97■□□□□ 0.15
SMARCD2-205ENST00000577686 TDRD5Q8NAT2 981 aaKnown RBP15.97■□□□□ 0.15
SMARCD2-205ENST00000577686 URGCPQ8TCY9 931 aa15.97■□□□□ 0.15
SMARCD2-205ENST00000577686 KCNB2Q92953 911 aa15.97■□□□□ 0.15
SMARCD2-205ENST00000577686 TRAIPQ9BWF2 469 aa15.97■□□□□ 0.15
SMARCD2-205ENST00000577686 NIFKQ9BYG3 293 aaKnown RBP15.97■□□□□ 0.15
SMARCD2-205ENST00000577686 UNC45AQ9H3U1 944 aa15.97■□□□□ 0.15
SMARCD2-205ENST00000577686 RNF19AQ9NV58 838 aa15.97■□□□□ 0.15
SMARCD2-205ENST00000577686 VPS54Q9P1Q0 977 aa15.97■□□□□ 0.15
SMARCD2-205ENST00000577686 PIN4Q9Y237 131 aaKnown RBP15.97■□□□□ 0.15
SMARCD2-205ENST00000577686 HCFC2Q9Y5Z7 792 aa15.97■□□□□ 0.15
SMARCD2-205ENST00000577686 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.96■□□□□ 0.15
SMARCD2-205ENST00000577686 ZC3H11AO75152 810 aaKnown RBP eCLIP15.96■□□□□ 0.15
SMARCD2-205ENST00000577686 CXCL14O95715 111 aa15.96■□□□□ 0.15
SMARCD2-205ENST00000577686 PBX3P40426 434 aa15.96■□□□□ 0.15
SMARCD2-205ENST00000577686 PHKA2P46019 1235 aa15.96■□□□□ 0.15
SMARCD2-205ENST00000577686 ATAT1Q5SQI0 421 aa15.96■□□□□ 0.15
SMARCD2-205ENST00000577686 MOXD1Q6UVY6 613 aa15.96■□□□□ 0.15
SMARCD2-205ENST00000577686 CATSPER4Q7RTX7 472 aa15.96■□□□□ 0.15
SMARCD2-205ENST00000577686 ZNF598Q86UK7 904 aaKnown RBP15.96■□□□□ 0.15
SMARCD2-205ENST00000577686 VPS52Q8N1B4 723 aa15.96■□□□□ 0.15
SMARCD2-205ENST00000577686 TBCKQ8TEA7 893 aa15.96■□□□□ 0.15
SMARCD2-205ENST00000577686 PCDHA4Q9UN74 947 aa15.96■□□□□ 0.15
SMARCD2-205ENST00000577686 PPME1Q9Y570 386 aa15.96■□□□□ 0.15
SMARCD2-205ENST00000577686 SNX14Q9Y5W7 946 aa15.96■□□□□ 0.15
SMARCD2-205ENST00000577686 CLASP2O75122 1294 aaKnown RBP15.95■□□□□ 0.14
SMARCD2-205ENST00000577686 DEXIO95424 95 aa15.95■□□□□ 0.14
SMARCD2-205ENST00000577686 CPA1P15085 419 aa15.95■□□□□ 0.14
SMARCD2-205ENST00000577686 AVPR2P30518 371 aa15.95■□□□□ 0.14
SMARCD2-205ENST00000577686 PSMC5P62195 406 aa15.95■□□□□ 0.14
SMARCD2-205ENST00000577686 TARBP2Q15633 366 aaKnown RBP15.95■□□□□ 0.14
SMARCD2-205ENST00000577686 NOMO2Q5JPE7 1267 aa15.95■□□□□ 0.14
SMARCD2-205ENST00000577686 KREMEN2Q8NCW0 462 aa15.95■□□□□ 0.14
SMARCD2-205ENST00000577686 SLC7A3Q8WY07 619 aa15.95■□□□□ 0.14
SMARCD2-205ENST00000577686 ATOH1Q92858 354 aaPredicted RBP15.95■□□□□ 0.14
SMARCD2-205ENST00000577686 ASIC4Q96FT7 647 aa15.95■□□□□ 0.14
SMARCD2-205ENST00000577686 ZNF668Q96K58 619 aaPredicted RBP15.95■□□□□ 0.14
SMARCD2-205ENST00000577686 NAP1L4Q99733 375 aaKnown RBP15.95■□□□□ 0.14
SMARCD2-205ENST00000577686 EMILIN2Q9BXX0 1053 aa15.95■□□□□ 0.14
SMARCD2-205ENST00000577686 AGXT2Q9BYV1 514 aa15.95■□□□□ 0.14
SMARCD2-205ENST00000577686 SUCLA2Q9P2R7 463 aaPredicted RBP15.95■□□□□ 0.14
SMARCD2-205ENST00000577686 DBR1Q9UK59 544 aaKnown RBP15.95■□□□□ 0.14
SMARCD2-205ENST00000577686 MYH9P35579 1960 aaKnown RBP15.95■□□□□ 0.14
SMARCD2-205ENST00000577686 DDX11L8A8MPP1 907 aa15.94■□□□□ 0.14
SMARCD2-205ENST00000577686 PSMD10O75832 226 aa15.94■□□□□ 0.14
SMARCD2-205ENST00000577686 XBP1P17861 261 aa15.94■□□□□ 0.14
SMARCD2-205ENST00000577686 FGFR4P22455 802 aa15.94■□□□□ 0.14
SMARCD2-205ENST00000577686 SP100P23497 879 aaPredicted RBP15.94■□□□□ 0.14
SMARCD2-205ENST00000577686 NONOQ15233 471 aaKnown RBP eCLIP15.94■□□□□ 0.14
SMARCD2-205ENST00000577686 NTRK3Q16288 839 aa15.94■□□□□ 0.14
SMARCD2-205ENST00000577686 UGCGQ16739 394 aa15.94■□□□□ 0.14
SMARCD2-205ENST00000577686 IER5LQ5T953 404 aa15.94■□□□□ 0.14
SMARCD2-205ENST00000577686 KIAA1841Q6NSI8 718 aa15.94■□□□□ 0.14
SMARCD2-205ENST00000577686 KRT25Q7Z3Z0 450 aa15.94■□□□□ 0.14
SMARCD2-205ENST00000577686 DDX53Q86TM3 631 aaKnown RBP15.94■□□□□ 0.14
SMARCD2-205ENST00000577686 CABP7Q86V35 215 aa15.94■□□□□ 0.14
SMARCD2-205ENST00000577686 RHPN2Q8IUC4 686 aa15.94■□□□□ 0.14
SMARCD2-205ENST00000577686 BLIDQ8IZY5 108 aa15.94■□□□□ 0.14
SMARCD2-205ENST00000577686 ACSF2Q96CM8 615 aaPredicted RBP15.94■□□□□ 0.14
SMARCD2-205ENST00000577686 FAM193BQ96PV7 902 aaPredicted RBP15.94■□□□□ 0.14
SMARCD2-205ENST00000577686 ZBP1Q9H171 429 aa15.94■□□□□ 0.14
SMARCD2-205ENST00000577686 MFSD1Q9H3U5 465 aa15.94■□□□□ 0.14
SMARCD2-205ENST00000577686 FAM105AQ9NUU6 356 aa15.94■□□□□ 0.14
SMARCD2-205ENST00000577686 KANSL3Q9P2N6 904 aa15.94■□□□□ 0.14
SMARCD2-205ENST00000577686 DPP7Q9UHL4 492 aa15.94■□□□□ 0.14
SMARCD2-205ENST00000577686 USTQ9Y2C2 406 aa15.94■□□□□ 0.14
SMARCD2-205ENST00000577686 SSX2IPQ9Y2D8 614 aa15.94■□□□□ 0.14
SMARCD2-205ENST00000577686 INPP5FQ9Y2H2 1132 aa15.94■□□□□ 0.14
SMARCD2-205ENST00000577686 IRAK3Q9Y616 596 aa15.94■□□□□ 0.14
SMARCD2-205ENST00000577686 TECTAO75443 2155 aa15.94■□□□□ 0.14
SMARCD2-205ENST00000577686 ZNF318Q5VUA4 2279 aa15.94■□□□□ 0.14
SMARCD2-205ENST00000577686 CYP3A7-CYP3A51PA0A087WV96 503 aa15.93■□□□□ 0.14
SMARCD2-205ENST00000577686 A0A087WZ62 844 aa15.93■□□□□ 0.14
SMARCD2-205ENST00000577686 IGKV6-21A0A0C4DH24 114 aa15.93■□□□□ 0.14
SMARCD2-205ENST00000577686 EPB41L2O43491 1005 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms