RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 A0A087X0T9 212 aa14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 USP17L5A8MUK1 530 aa14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 HNRNPDLO14979 420 aaKnown RBP14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 FAM228BP0C875 321 aa14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 PIK3CAP42336 1068 aa14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 TMPRSS15P98073 1019 aa14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 CTTNQ14247 550 aaKnown RBP14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 PDIA5Q14554 519 aa14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 STAT4Q14765 748 aa14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 ANKRD20A8PQ5CZ79 823 aa14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 RFX6Q8HWS3 928 aa14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 NUP85Q9BW27 656 aa14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 TRPC6Q9Y210 931 aa14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 TOM1L1O75674 476 aa14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 BMP6P22004 513 aa14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 YWHAEP62258 255 aaKnown RBP14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 KRT17Q04695 432 aa14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 ITIH4Q14624 930 aa14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 NLRX1Q86UT6 975 aa14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 PIGBQ92521 554 aa14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 CDKL2Q92772 493 aa14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 TEKT1Q969V4 418 aa14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 STAMBPL1Q96FJ0 436 aa14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 NDE1Q9NXR1 346 aa14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 ZBTB12Q9Y330 459 aaPredicted RBP14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 USP32Q8NFA0 1604 aa14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 GSTA1P08263 222 aa14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 CUL3Q13618 768 aa14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 TSEN2Q8NCE0 465 aaKnown RBP14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 DEPTORQ8TB45 409 aa14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 PIGOQ8TEQ8 1089 aa14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 FAM81BQ96LP2 452 aa14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 ROPN1BQ9BZX4 212 aaPredicted RBP14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 PABPC3Q9H361 631 aaKnown RBP14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 KIF9Q9HAQ2 790 aa14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 ROPN1Q9HAT0 212 aaPredicted RBP14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 SERPINB13Q9UIV8 391 aa14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 TTC7AQ9ULT0 858 aaPredicted RBP14.04□□□□□ -0.16
PCDHGB3-201ENST00000576222 POTEFA5A3E0 1075 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 POTEIP0CG38 1075 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 AP2B1P63010 937 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 UBXN2AP68543 259 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 ASPHQ12797 758 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 POTEGQ6S5H5 508 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 POTEEQ6S8J3 1075 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 CRLF3Q8IUI8 442 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 ZNF577Q9BSK1 485 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 SUCLA2Q9P2R7 463 aaPredicted RBP14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 ZSCAN5CA6NGD5 496 aaPredicted RBP14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 NVLO15381 856 aaKnown RBP14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 DNAJC8O75937 253 aaPredicted RBP14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 SLC9A1P19634 815 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 GCLMP48507 274 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 SNX16P57768 344 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 ESRRGP62508 458 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 ERFEQ4G0M1 354 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 PDXDC2PQ6P474 469 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 BARGINQ6ZT62 677 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 DTX3LQ8TDB6 740 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 OLFM3Q96PB7 478 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 PLA2G12BQ9BX93 195 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 INTS2Q9H0H0 1204 aaKnown RBP14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 BSDC1Q9NW68 430 aaPredicted RBP14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 PPP1R1BQ9UD71 204 aaPredicted RBP14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 MAP2P11137 1827 aaKnown RBP14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 CNTNAP5Q8WYK1 1306 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 CEP70Q8NHQ1 597 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 ZKSCAN4Q969J2 545 aaPredicted RBP14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 MPHOSPH6Q99547 160 aaKnown RBP14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 LEMD3Q9Y2U8 911 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 DEPDC5O75140 1603 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 FRMPD1Q5SYB0 1578 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 LOC102724428A0A0B4J2F2 783 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 FAM237AA0A1B0GTK4 181 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 MCF2LO15068 1137 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 HNRNPCL1O60812 293 aaKnown RBP14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 ATP6V1G2O95670 118 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 BRD2P25440 801 aaKnown RBP14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 SIK1P57059 783 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 MDM2Q00987 491 aaPredicted RBP14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 BRDTQ58F21 947 aaPredicted RBP14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 HP1BP3Q5SSJ5 553 aaPredicted RBP14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 CREG2Q8IUH2 290 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 ZBTB10Q96DT7 871 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 TRAIPQ9BWF2 469 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 DLGAP2Q9P1A6 1054 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 TACC3Q9Y6A5 838 aa14.03□□□□□ -0.16
PCDHGB3-201ENST00000576222 COPEO14579 308 aa14.02□□□□□ -0.16
PCDHGB3-201ENST00000576222 FAM153BP0C7A2 387 aa14.02□□□□□ -0.16
PCDHGB3-201ENST00000576222 ATP2B4P23634 1241 aa14.02□□□□□ -0.16
PCDHGB3-201ENST00000576222 ARL4CP56559 192 aa14.02□□□□□ -0.16
PCDHGB3-201ENST00000576222 FAM153CQ494X1 144 aa14.02□□□□□ -0.16
PCDHGB3-201ENST00000576222 ANKRD20A4Q4UJ75 823 aa14.02□□□□□ -0.16
PCDHGB3-201ENST00000576222 ANKRD20A2Q5SQ80 823 aa14.02□□□□□ -0.16
PCDHGB3-201ENST00000576222 ANKRD20A1Q5TYW2 823 aa14.02□□□□□ -0.16
PCDHGB3-201ENST00000576222 DNAJC24Q6P3W2 148 aa14.02□□□□□ -0.16
PCDHGB3-201ENST00000576222 COL23A1Q86Y22 540 aaPredicted RBP14.02□□□□□ -0.16
PCDHGB3-201ENST00000576222 ZNF354CQ86Y25 554 aa14.02□□□□□ -0.16
PCDHGB3-201ENST00000576222 FUKQ8N0W3 1084 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms