RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	NME8	Q8N427	588 aa		13.13	□□□□□ -0.31
PRPF8-212	ENST00000575116	METTL13	Q8N6R0	699 aa		13.13	□□□□□ -0.31
PRPF8-212	ENST00000575116	PRPF31	Q8WWY3	499 aa	Known RBP	13.13	□□□□□ -0.31
PRPF8-212	ENST00000575116	HPS3	Q969F9	1004 aa		13.13	□□□□□ -0.31
PRPF8-212	ENST00000575116	KMT5A	Q9NQR1	393 aa		13.13	□□□□□ -0.31
PRPF8-212	ENST00000575116	TBC1D7	Q9P0N9	293 aa		13.13	□□□□□ -0.31
PRPF8-212	ENST00000575116	SUCLA2	Q9P2R7	463 aa	Predicted RBP	13.13	□□□□□ -0.31
PRPF8-212	ENST00000575116	RWDD2A	Q9UIY3	292 aa		13.13	□□□□□ -0.31
PRPF8-212	ENST00000575116	BICDL2	A1A5D9	508 aa		13.12	□□□□□ -0.31
PRPF8-212	ENST00000575116	CCDC169	A6NNP5	214 aa		13.12	□□□□□ -0.31
PRPF8-212	ENST00000575116	SMTNL1	A8MU46	457 aa		13.12	□□□□□ -0.31
PRPF8-212	ENST00000575116	PPP1R37	O75864	691 aa		13.12	□□□□□ -0.31
PRPF8-212	ENST00000575116	GCNT3	O95395	438 aa		13.12	□□□□□ -0.31
PRPF8-212	ENST00000575116	CYP2C9	P11712	490 aa		13.12	□□□□□ -0.31
PRPF8-212	ENST00000575116	CCNE1	P24864	410 aa		13.12	□□□□□ -0.31
PRPF8-212	ENST00000575116	NMT1	P30419	496 aa	Known RBP	13.12	□□□□□ -0.31
PRPF8-212	ENST00000575116	CHMP4BP1	P59074	171 aa		13.12	□□□□□ -0.31
PRPF8-212	ENST00000575116	LAMTOR4	Q0VGL1	99 aa		13.12	□□□□□ -0.31
PRPF8-212	ENST00000575116	PAK1	Q13153	545 aa		13.12	□□□□□ -0.31
PRPF8-212	ENST00000575116	ITGA7	Q13683	1181 aa		13.12	□□□□□ -0.31
PRPF8-212	ENST00000575116	KNOP1	Q1ED39	458 aa	Known RBP	13.12	□□□□□ -0.31
PRPF8-212	ENST00000575116	CENPP	Q6IPU0	288 aa		13.12	□□□□□ -0.31
PRPF8-212	ENST00000575116	TAF2	Q6P1X5	1199 aa		13.12	□□□□□ -0.31
PRPF8-212	ENST00000575116	KIAA0319L	Q8IZA0	1049 aa		13.12	□□□□□ -0.31
PRPF8-212	ENST00000575116	LRRC71	Q8N4P6	559 aa		13.12	□□□□□ -0.31
PRPF8-212	ENST00000575116	SLC43A3	Q8NBI5	491 aa		13.12	□□□□□ -0.31
PRPF8-212	ENST00000575116	ENOX1	Q8TC92	643 aa	Known RBP	13.12	□□□□□ -0.31
PRPF8-212	ENST00000575116	ASAP3	Q8TDY4	903 aa		13.12	□□□□□ -0.31
PRPF8-212	ENST00000575116	SCFD1	Q8WVM8	642 aa		13.12	□□□□□ -0.31
PRPF8-212	ENST00000575116	BSND	Q8WZ55	320 aa		13.12	□□□□□ -0.31
PRPF8-212	ENST00000575116	VTI1A	Q96AJ9	217 aa		13.12	□□□□□ -0.31
PRPF8-212	ENST00000575116	MAP7D2	Q96T17	732 aa		13.12	□□□□□ -0.31
PRPF8-212	ENST00000575116	NFKBIZ	Q9BYH8	718 aa		13.12	□□□□□ -0.31
PRPF8-212	ENST00000575116	TMEM134	Q9H6X4	195 aa		13.12	□□□□□ -0.31
PRPF8-212	ENST00000575116	TMEM206	Q9H813	350 aa		13.12	□□□□□ -0.31
PRPF8-212	ENST00000575116	GRIN2D	O15399	1336 aa		13.12	□□□□□ -0.31
PRPF8-212	ENST00000575116		A0A0U1RQG5	324 aa	Predicted RBP	13.11	□□□□□ -0.31
PRPF8-212	ENST00000575116		A0A1W2PQ45	241 aa	Predicted RBP	13.11	□□□□□ -0.31
PRPF8-212	ENST00000575116		A0A1W2PQY0	241 aa		13.11	□□□□□ -0.31
PRPF8-212	ENST00000575116		K7ENM7	598 aa		13.11	□□□□□ -0.31
PRPF8-212	ENST00000575116	SLC16A4	O15374	487 aa		13.11	□□□□□ -0.31
PRPF8-212	ENST00000575116	TFRC	P02786	760 aa	Known RBP	13.11	□□□□□ -0.31
PRPF8-212	ENST00000575116	MYB	P10242	640 aa		13.11	□□□□□ -0.31
PRPF8-212	ENST00000575116	CLCN3	P51790	818 aa		13.11	□□□□□ -0.31
PRPF8-212	ENST00000575116	EFNA5	P52803	228 aa		13.11	□□□□□ -0.31
PRPF8-212	ENST00000575116	DRP2	Q13474	957 aa		13.11	□□□□□ -0.31
PRPF8-212	ENST00000575116	GSE1	Q14687	1217 aa		13.11	□□□□□ -0.31
PRPF8-212	ENST00000575116	IQCB1	Q15051	598 aa		13.11	□□□□□ -0.31
PRPF8-212	ENST00000575116	L1TD1	Q5T7N2	865 aa	Known RBP	13.11	□□□□□ -0.31
PRPF8-212	ENST00000575116	RPAIN	Q86UA6	219 aa		13.11	□□□□□ -0.31
PRPF8-212	ENST00000575116	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.11	□□□□□ -0.31
PRPF8-212	ENST00000575116	ANKLE1	Q8NAG6	615 aa		13.11	□□□□□ -0.31
PRPF8-212	ENST00000575116	TMEM161B	Q8NDZ6	487 aa		13.11	□□□□□ -0.31
PRPF8-212	ENST00000575116	DEPTOR	Q8TB45	409 aa		13.11	□□□□□ -0.31
PRPF8-212	ENST00000575116	U2AF1L4	Q8WU68	220 aa	Known RBP	13.11	□□□□□ -0.31
PRPF8-212	ENST00000575116	NELFB	Q8WX92	580 aa		13.11	□□□□□ -0.31
PRPF8-212	ENST00000575116	P2RX5	Q93086	422 aa		13.11	□□□□□ -0.31
PRPF8-212	ENST00000575116	ACCS	Q96QU6	501 aa		13.11	□□□□□ -0.31
PRPF8-212	ENST00000575116	C2orf40	Q9H1Z8	148 aa		13.11	□□□□□ -0.31
PRPF8-212	ENST00000575116	CBX8	Q9HC52	389 aa		13.11	□□□□□ -0.31
PRPF8-212	ENST00000575116	STARD7	Q9NQZ5	370 aa		13.11	□□□□□ -0.31
PRPF8-212	ENST00000575116	CGN	Q9P2M7	1197 aa	Known RBP	13.11	□□□□□ -0.31
PRPF8-212	ENST00000575116	ARHGAP28	Q9P2N2	729 aa		13.11	□□□□□ -0.31
PRPF8-212	ENST00000575116	MAPK8IP1	Q9UQF2	711 aa		13.11	□□□□□ -0.31
PRPF8-212	ENST00000575116	BECN2	A8MW95	431 aa		13.1	□□□□□ -0.31
PRPF8-212	ENST00000575116	PDXK	O00764	312 aa		13.1	□□□□□ -0.31
PRPF8-212	ENST00000575116	TREH	O43280	583 aa		13.1	□□□□□ -0.31
PRPF8-212	ENST00000575116	GJA8	P48165	433 aa		13.1	□□□□□ -0.31
PRPF8-212	ENST00000575116	CASP5	P51878	434 aa		13.1	□□□□□ -0.31
PRPF8-212	ENST00000575116	SNRPF	P62306	86 aa	Known RBP	13.1	□□□□□ -0.31
PRPF8-212	ENST00000575116	MYL5	Q02045	173 aa		13.1	□□□□□ -0.31
PRPF8-212	ENST00000575116	LRRC63	Q05C16	580 aa		13.1	□□□□□ -0.31
PRPF8-212	ENST00000575116	CAPS	Q13938	189 aa		13.1	□□□□□ -0.31
PRPF8-212	ENST00000575116	HIC1	Q14526	733 aa		13.1	□□□□□ -0.31
PRPF8-212	ENST00000575116	UVSSA	Q2YD98	709 aa		13.1	□□□□□ -0.31
PRPF8-212	ENST00000575116	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.1	□□□□□ -0.31
PRPF8-212	ENST00000575116	SPATA1	Q5VX52	437 aa		13.1	□□□□□ -0.31
PRPF8-212	ENST00000575116	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.1	□□□□□ -0.31
PRPF8-212	ENST00000575116	KLHL10	Q6JEL2	608 aa		13.1	□□□□□ -0.31
PRPF8-212	ENST00000575116	GDF6	Q6KF10	455 aa	Predicted RBP	13.1	□□□□□ -0.31
PRPF8-212	ENST00000575116	PPP4R3CP	Q6ZMV5	832 aa		13.1	□□□□□ -0.31
PRPF8-212	ENST00000575116	ZNF410	Q86VK4	478 aa		13.1	□□□□□ -0.31
PRPF8-212	ENST00000575116	RHPN2	Q8IUC4	686 aa		13.1	□□□□□ -0.31
PRPF8-212	ENST00000575116	ZBTB8OS	Q8IWT0	167 aa		13.1	□□□□□ -0.31
PRPF8-212	ENST00000575116	GLIS3	Q8NEA6	775 aa		13.1	□□□□□ -0.31
PRPF8-212	ENST00000575116	TSG101	Q99816	390 aa		13.1	□□□□□ -0.31
PRPF8-212	ENST00000575116	FGFBP2	Q9BYJ0	223 aa		13.1	□□□□□ -0.31
PRPF8-212	ENST00000575116	RBSN	Q9H1K0	784 aa		13.1	□□□□□ -0.31
PRPF8-212	ENST00000575116	KCTD10	Q9H3F6	313 aa		13.1	□□□□□ -0.31
PRPF8-212	ENST00000575116	EXOC7	Q9UPT5	735 aa		13.1	□□□□□ -0.31
PRPF8-212	ENST00000575116	TRAF3IP3	Q9Y228	551 aa		13.1	□□□□□ -0.31
PRPF8-212	ENST00000575116	AKT3	Q9Y243	479 aa		13.1	□□□□□ -0.31
PRPF8-212	ENST00000575116	EVPL	Q92817	2033 aa		13.1	□□□□□ -0.31
PRPF8-212	ENST00000575116	FSD2	A1L4K1	749 aa		13.09	□□□□□ -0.31
PRPF8-212	ENST00000575116	DENND3	A2RUS2	1198 aa		13.09	□□□□□ -0.31
PRPF8-212	ENST00000575116	GOLGA6L3	A6NEY3	463 aa		13.09	□□□□□ -0.31
PRPF8-212	ENST00000575116	LRRIQ4	A6NIV6	560 aa		13.09	□□□□□ -0.31
PRPF8-212	ENST00000575116		K7ERI5	159 aa		13.09	□□□□□ -0.31
PRPF8-212	ENST00000575116	ARVCF	O00192	962 aa		13.09	□□□□□ -0.31
PRPF8-212	ENST00000575116	PRPF6	O94906	941 aa	Known RBP	13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms