RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 ENTPD7Q9NQZ7 604 aa17.1■□□□□ 0.33
CTNS-209ENST00000574776 DACT1Q9NYF0 836 aa17.1■□□□□ 0.33
CTNS-209ENST00000574776 SPG21Q9NZD8 308 aa17.1■□□□□ 0.33
CTNS-209ENST00000574776 SUCLA2Q9P2R7 463 aaPredicted RBP17.1■□□□□ 0.33
CTNS-209ENST00000574776 EML1O00423 815 aa17.09■□□□□ 0.33
CTNS-209ENST00000574776 SLC37A4O43826 429 aa17.09■□□□□ 0.33
CTNS-209ENST00000574776 MAFO75444 373 aaPredicted RBP17.09■□□□□ 0.33
CTNS-209ENST00000574776 ATF7P17544 494 aaPredicted RBP17.09■□□□□ 0.33
CTNS-209ENST00000574776 PSMC5P62195 406 aa17.09■□□□□ 0.33
CTNS-209ENST00000574776 SCRN1Q12765 414 aa17.09■□□□□ 0.33
CTNS-209ENST00000574776 LLGL2Q6P1M3 1020 aa17.09■□□□□ 0.33
CTNS-209ENST00000574776 HFE2Q6ZVN8 426 aa17.09■□□□□ 0.33
CTNS-209ENST00000574776 ANO5Q75V66 913 aa17.09■□□□□ 0.33
CTNS-209ENST00000574776 KRT25Q7Z3Z0 450 aa17.09■□□□□ 0.33
CTNS-209ENST00000574776 TMC7Q7Z402 723 aa17.09■□□□□ 0.33
CTNS-209ENST00000574776 RHPN2Q8IUC4 686 aa17.09■□□□□ 0.33
CTNS-209ENST00000574776 KSR1Q8IVT5 923 aa17.09■□□□□ 0.33
CTNS-209ENST00000574776 FAM177A1Q8N128 213 aaPredicted RBP17.09■□□□□ 0.33
CTNS-209ENST00000574776 EDAQ92838 391 aa17.09■□□□□ 0.33
CTNS-209ENST00000574776 RPGRIP1Q96KN7 1286 aa17.09■□□□□ 0.33
CTNS-209ENST00000574776 PHF7Q9BWX1 381 aaPredicted RBP17.09■□□□□ 0.33
CTNS-209ENST00000574776 SLKQ9H2G2 1235 aaPredicted RBP17.09■□□□□ 0.33
CTNS-209ENST00000574776 NGRNQ9NPE2 291 aaKnown RBP17.09■□□□□ 0.33
CTNS-209ENST00000574776 CHST12Q9NRB3 414 aa17.09■□□□□ 0.33
CTNS-209ENST00000574776 FSD2A1L4K1 749 aa17.08■□□□□ 0.32
CTNS-209ENST00000574776 NT5C1B-RDH14C9J2C7 533 aa17.08■□□□□ 0.32
CTNS-209ENST00000574776 PPM1AP35813 382 aa17.08■□□□□ 0.32
CTNS-209ENST00000574776 TECP42680 631 aa17.08■□□□□ 0.32
CTNS-209ENST00000574776 KCNC3Q14003 757 aa17.08■□□□□ 0.32
CTNS-209ENST00000574776 LONRF3Q496Y0 759 aa17.08■□□□□ 0.32
CTNS-209ENST00000574776 PLA2G4FQ68DD2 849 aa17.08■□□□□ 0.32
CTNS-209ENST00000574776 TMEM184AQ6ZMB5 413 aa17.08■□□□□ 0.32
CTNS-209ENST00000574776 PHF20Q9BVI0 1012 aa17.08■□□□□ 0.32
CTNS-209ENST00000574776 APOL5Q9BWW9 433 aa17.08■□□□□ 0.32
CTNS-209ENST00000574776 S1PR5Q9H228 398 aa17.08■□□□□ 0.32
CTNS-209ENST00000574776 GJB4Q9NTQ9 266 aa17.08■□□□□ 0.32
CTNS-209ENST00000574776 CCDC194A0A1B0GVG4 234 aa17.07■□□□□ 0.32
CTNS-209ENST00000574776 PHKA2P46019 1235 aa17.07■□□□□ 0.32
CTNS-209ENST00000574776 QARSP47897 775 aaKnown RBP17.07■□□□□ 0.32
CTNS-209ENST00000574776 ALDH7A1P49419 539 aaKnown RBP17.07■□□□□ 0.32
CTNS-209ENST00000574776 NPEPPSP55786 919 aa17.07■□□□□ 0.32
CTNS-209ENST00000574776 BCAR1P56945 870 aa17.07■□□□□ 0.32
CTNS-209ENST00000574776 CBX2Q14781 532 aaPredicted RBP17.07■□□□□ 0.32
CTNS-209ENST00000574776 TWF2Q6IBS0 349 aaKnown RBP17.07■□□□□ 0.32
CTNS-209ENST00000574776 ANKRD54Q6NXT1 300 aa17.07■□□□□ 0.32
CTNS-209ENST00000574776 SLC39A11Q8N1S5 342 aa17.07■□□□□ 0.32
CTNS-209ENST00000574776 ZNF579Q8NAF0 562 aaKnown RBP17.07■□□□□ 0.32
CTNS-209ENST00000574776 SUSD6Q92537 303 aa17.07■□□□□ 0.32
CTNS-209ENST00000574776 LPPQ93052 612 aa17.07■□□□□ 0.32
CTNS-209ENST00000574776 INO80BQ9C086 356 aaPredicted RBP17.07■□□□□ 0.32
CTNS-209ENST00000574776 CYP26B1Q9NR63 512 aa17.07■□□□□ 0.32
CTNS-209ENST00000574776 TECTAO75443 2155 aa17.06■□□□□ 0.32
CTNS-209ENST00000574776 CDKL5O76039 1030 aa17.06■□□□□ 0.32
CTNS-209ENST00000574776 SRGAP2BP0DMP2 458 aa17.06■□□□□ 0.32
CTNS-209ENST00000574776 SFPQP23246 707 aaKnown RBP eCLIP17.06■□□□□ 0.32
CTNS-209ENST00000574776 PPP2R5CQ13362 524 aa17.06■□□□□ 0.32
CTNS-209ENST00000574776 PPP4R3AQ6IN85 833 aa17.06■□□□□ 0.32
CTNS-209ENST00000574776 SYCE2Q6PIF2 218 aa17.06■□□□□ 0.32
CTNS-209ENST00000574776 NEK8Q86SG6 692 aa17.06■□□□□ 0.32
CTNS-209ENST00000574776 ZNF410Q86VK4 478 aa17.06■□□□□ 0.32
CTNS-209ENST00000574776 MRPL43Q8N983 215 aaKnown RBP17.06■□□□□ 0.32
CTNS-209ENST00000574776 OXER1Q8TDS5 423 aa17.06■□□□□ 0.32
CTNS-209ENST00000574776 MFSD14AQ96MC6 490 aa17.06■□□□□ 0.32
CTNS-209ENST00000574776 FAM20AQ96MK3 541 aa17.06■□□□□ 0.32
CTNS-209ENST00000574776 NLRP4Q96MN2 994 aa17.06■□□□□ 0.32
CTNS-209ENST00000574776 KCNMB3Q9NPA1 279 aa17.06■□□□□ 0.32
CTNS-209ENST00000574776 VAV3Q9UKW4 847 aa17.06■□□□□ 0.32
CTNS-209ENST00000574776 TPCN1Q9ULQ1 816 aa17.06■□□□□ 0.32
CTNS-209ENST00000574776 PIN4Q9Y237 131 aaKnown RBP17.06■□□□□ 0.32
CTNS-209ENST00000574776 C2orf71A6NGG8 1288 aa17.05■□□□□ 0.32
CTNS-209ENST00000574776 MARCH6O60337 910 aa17.05■□□□□ 0.32
CTNS-209ENST00000574776 CCNT1O60563 726 aaKnown RBP17.05■□□□□ 0.32
CTNS-209ENST00000574776 PFKFB2O60825 505 aa17.05■□□□□ 0.32
CTNS-209ENST00000574776 CXCL14O95715 111 aa17.05■□□□□ 0.32
CTNS-209ENST00000574776 XBP1P17861 261 aa17.05■□□□□ 0.32
CTNS-209ENST00000574776 ZXDAP98168 799 aa17.05■□□□□ 0.32
CTNS-209ENST00000574776 SMC1AQ14683 1233 aaKnown RBP17.05■□□□□ 0.32
CTNS-209ENST00000574776 TRIM67Q6ZTA4 783 aa17.05■□□□□ 0.32
CTNS-209ENST00000574776 PIK3AP1Q6ZUJ8 805 aa17.05■□□□□ 0.32
CTNS-209ENST00000574776 CATSPER4Q7RTX7 472 aa17.05■□□□□ 0.32
CTNS-209ENST00000574776 HAS1Q92839 578 aa17.05■□□□□ 0.32
CTNS-209ENST00000574776 CEP170P1Q96L14 293 aa17.05■□□□□ 0.32
CTNS-209ENST00000574776 JPH2Q9BR39 696 aaPredicted RBP17.05■□□□□ 0.32
CTNS-209ENST00000574776 TRAIPQ9BWF2 469 aa17.05■□□□□ 0.32
CTNS-209ENST00000574776 MRPL9Q9BYD2 267 aaKnown RBP17.05■□□□□ 0.32
CTNS-209ENST00000574776 WRAP73Q9P2S5 460 aaPredicted RBP17.05■□□□□ 0.32
CTNS-209ENST00000574776 MEIS3P2A8K0S8 358 aa17.04■□□□□ 0.32
CTNS-209ENST00000574776 DKC1O60832 514 aaKnown RBP eCLIP17.04■□□□□ 0.324e-15■■■■■ 36.5
CTNS-209ENST00000574776 P4HBP07237 508 aaKnown RBP17.04■□□□□ 0.32
CTNS-209ENST00000574776 SRGAP2CP0DJJ0 459 aa17.04■□□□□ 0.32
CTNS-209ENST00000574776 SKIP12755 728 aa17.04■□□□□ 0.32
CTNS-209ENST00000574776 GCFC2P16383 781 aaKnown RBP17.04■□□□□ 0.32
CTNS-209ENST00000574776 CA8P35219 290 aa17.04■□□□□ 0.32
CTNS-209ENST00000574776 PRPF31Q8WWY3 499 aaKnown RBP17.04■□□□□ 0.32
CTNS-209ENST00000574776 TMEM143Q96AN5 459 aa17.04■□□□□ 0.32
CTNS-209ENST00000574776 TMEM169Q96HH4 297 aa17.04■□□□□ 0.32
CTNS-209ENST00000574776 FBXL18Q96ME1 805 aa17.04■□□□□ 0.32
CTNS-209ENST00000574776 IFT122Q9HBG6 1241 aa17.04■□□□□ 0.32
CTNS-209ENST00000574776 FAM105AQ9NUU6 356 aa17.04■□□□□ 0.32
CTNS-209ENST00000574776 RGL1Q9NZL6 768 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms