RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 PPME1Q9Y570 386 aa29.12■■■□□ 2.25
NPLOC4-215ENST00000574095 ARID2Q68CP9 1835 aa29.12■■■□□ 2.25
NPLOC4-215ENST00000574095 PLXNA4Q9HCM2 1894 aa29.12■■■□□ 2.25
NPLOC4-215ENST00000574095 MUC3AQ02505 3323 aa29.12■■■□□ 2.25
NPLOC4-215ENST00000574095 RFC5P40937 340 aa29.11■■■□□ 2.25
NPLOC4-215ENST00000574095 EXOC8Q8IYI6 725 aa29.11■■■□□ 2.25
NPLOC4-215ENST00000574095 FBXO18Q8NFZ0 1043 aa29.11■■■□□ 2.25
NPLOC4-215ENST00000574095 CASD1Q96PB1 797 aa29.11■■■□□ 2.25
NPLOC4-215ENST00000574095 HSD17B14Q9BPX1 270 aa29.11■■■□□ 2.25
NPLOC4-215ENST00000574095 INO80BQ9C086 356 aaPredicted RBP29.11■■■□□ 2.25
NPLOC4-215ENST00000574095 PCDHB12Q9Y5F1 795 aa29.11■■■□□ 2.25
NPLOC4-215ENST00000574095 COL4A3BPQ9Y5P4 624 aa29.11■■■□□ 2.25
NPLOC4-215ENST00000574095 A0A0U1RQF3 1178 aa29.1■■■□□ 2.25
NPLOC4-215ENST00000574095 SFPQP23246 707 aaKnown RBP eCLIP29.1■■■□□ 2.25
NPLOC4-215ENST00000574095 LEXMQ3ZCV2 418 aa29.1■■■□□ 2.25
NPLOC4-215ENST00000574095 POF1BQ8WVV4 589 aa29.1■■■□□ 2.25
NPLOC4-215ENST00000574095 PRPF31Q8WWY3 499 aaKnown RBP29.1■■■□□ 2.25
NPLOC4-215ENST00000574095 PABPC5Q96DU9 382 aaKnown RBP29.1■■■□□ 2.25
NPLOC4-215ENST00000574095 TMEM117Q9H0C3 514 aa29.1■■■□□ 2.25
NPLOC4-215ENST00000574095 CWH43Q9H720 699 aa29.1■■■□□ 2.25
NPLOC4-215ENST00000574095 AAASQ9NRG9 546 aa29.1■■■□□ 2.25
NPLOC4-215ENST00000574095 DACT1Q9NYF0 836 aa29.1■■■□□ 2.25
NPLOC4-215ENST00000574095 HOXA2O43364 376 aa29.09■■■□□ 2.25
NPLOC4-215ENST00000574095 SRGAP2CP0DJJ0 459 aa29.09■■■□□ 2.25
NPLOC4-215ENST00000574095 EMC2Q15006 297 aa29.09■■■□□ 2.25
NPLOC4-215ENST00000574095 GADD45GIP1Q8TAE8 222 aaPredicted RBP29.09■■■□□ 2.25
NPLOC4-215ENST00000574095 FOXP1Q9H334 677 aaPredicted RBP29.09■■■□□ 2.25
NPLOC4-215ENST00000574095 IFT122Q9HBG6 1241 aa29.09■■■□□ 2.25
NPLOC4-215ENST00000574095 CHST12Q9NRB3 414 aa29.09■■■□□ 2.25
NPLOC4-215ENST00000574095 CLDND1Q9NY35 253 aa29.09■■■□□ 2.25
NPLOC4-215ENST00000574095 POTEMA6NI47 508 aa29.08■■■□□ 2.25
NPLOC4-215ENST00000574095 H3BQ06 376 aaPredicted RBP29.08■■■□□ 2.25
NPLOC4-215ENST00000574095 IRS1P35568 1242 aa29.08■■■□□ 2.25
NPLOC4-215ENST00000574095 HYAL1Q12794 435 aa29.08■■■□□ 2.25
NPLOC4-215ENST00000574095 RABEP1Q15276 862 aa29.08■■■□□ 2.25
NPLOC4-215ENST00000574095 ZNF174Q15697 407 aa29.08■■■□□ 2.25
NPLOC4-215ENST00000574095 LRRC55Q6ZSA7 311 aa29.08■■■□□ 2.25
NPLOC4-215ENST00000574095 CATSPER4Q7RTX7 472 aa29.08■■■□□ 2.25
NPLOC4-215ENST00000574095 ZNF598Q86UK7 904 aaKnown RBP29.08■■■□□ 2.25
NPLOC4-215ENST00000574095 ABI1Q8IZP0 508 aa29.08■■■□□ 2.25
NPLOC4-215ENST00000574095 COLGALT1Q8NBJ5 622 aa29.08■■■□□ 2.25
NPLOC4-215ENST00000574095 NEK9Q8TD19 979 aa29.08■■■□□ 2.25
NPLOC4-215ENST00000574095 PSPC1Q8WXF1 523 aaKnown RBP29.08■■■□□ 2.25
NPLOC4-215ENST00000574095 IGFLR1Q9H665 355 aa29.08■■■□□ 2.25
NPLOC4-215ENST00000574095 A0A087WWV3 80 aa29.07■■■□□ 2.24
NPLOC4-215ENST00000574095 EOMESO95936 686 aa29.07■■■□□ 2.24
NPLOC4-215ENST00000574095 ATF7P17544 494 aaPredicted RBP29.07■■■□□ 2.24
NPLOC4-215ENST00000574095 GTF2F1P35269 517 aaKnown RBP eCLIP29.07■■■□□ 2.24
NPLOC4-215ENST00000574095 LAMTOR4Q0VGL1 99 aa29.07■■■□□ 2.24
NPLOC4-215ENST00000574095 COL19A1Q14993 1142 aa29.07■■■□□ 2.24
NPLOC4-215ENST00000574095 CLLU1OSQ5K130 101 aa29.07■■■□□ 2.24
NPLOC4-215ENST00000574095 MTRQ99707 1265 aa29.07■■■□□ 2.24
NPLOC4-215ENST00000574095 PIN4Q9Y237 131 aaKnown RBP29.07■■■□□ 2.24
NPLOC4-215ENST00000574095 LYPLA2O95372 231 aa29.06■■■□□ 2.24
NPLOC4-215ENST00000574095 GNL2Q13823 731 aaKnown RBP29.06■■■□□ 2.24
NPLOC4-215ENST00000574095 TWF2Q6IBS0 349 aaKnown RBP29.06■■■□□ 2.24
NPLOC4-215ENST00000574095 TCP11Q8WWU5 503 aa29.06■■■□□ 2.24
NPLOC4-215ENST00000574095 FGF18O76093 207 aa29.05■■■□□ 2.24
NPLOC4-215ENST00000574095 PHKA2P46019 1235 aa29.05■■■□□ 2.24
NPLOC4-215ENST00000574095 ADGRD2Q7Z7M1 963 aa29.05■■■□□ 2.24
NPLOC4-215ENST00000574095 FERMT3Q86UX7 667 aa29.05■■■□□ 2.24
NPLOC4-215ENST00000574095 THNSL1Q8IYQ7 743 aa29.05■■■□□ 2.24
NPLOC4-215ENST00000574095 HELQQ8TDG4 1101 aa29.05■■■□□ 2.24
NPLOC4-215ENST00000574095 PIGOQ8TEQ8 1089 aa29.05■■■□□ 2.24
NPLOC4-215ENST00000574095 MINDY3Q9H8M7 445 aa29.05■■■□□ 2.24
NPLOC4-215ENST00000574095 XPNPEP1Q9NQW7 623 aa29.05■■■□□ 2.24
NPLOC4-215ENST00000574095 ANKEF1Q9NU02 776 aa29.05■■■□□ 2.24
NPLOC4-215ENST00000574095 PCDHGC5Q9Y5F6 944 aa29.05■■■□□ 2.24
NPLOC4-215ENST00000574095 NCK2O43639 380 aa29.04■■■□□ 2.24
NPLOC4-215ENST00000574095 GAS2O43903 313 aaKnown RBP29.04■■■□□ 2.24
NPLOC4-215ENST00000574095 ST18O60284 1047 aa29.04■■■□□ 2.24
NPLOC4-215ENST00000574095 LAG3P18627 525 aa29.04■■■□□ 2.24
NPLOC4-215ENST00000574095 LTBRP36941 435 aa29.04■■■□□ 2.24
NPLOC4-215ENST00000574095 TECP42680 631 aa29.04■■■□□ 2.24
NPLOC4-215ENST00000574095 CTC1Q2NKJ3 1217 aa29.04■■■□□ 2.24
NPLOC4-215ENST00000574095 LONRF3Q496Y0 759 aa29.04■■■□□ 2.24
NPLOC4-215ENST00000574095 PTCRAQ6ISU1 281 aaPredicted RBP29.04■■■□□ 2.24
NPLOC4-215ENST00000574095 NOSTRINQ8IVI9 506 aa29.04■■■□□ 2.24
NPLOC4-215ENST00000574095 LRRC43Q8N309 656 aa29.04■■■□□ 2.24
NPLOC4-215ENST00000574095 RNF149Q8NC42 400 aa29.04■■■□□ 2.24
NPLOC4-215ENST00000574095 ASAP2O43150 1006 aa29.03■■■□□ 2.24
NPLOC4-215ENST00000574095 IL9P15248 144 aa29.03■■■□□ 2.24
NPLOC4-215ENST00000574095 TTC38Q5R3I4 469 aa29.03■■■□□ 2.24
NPLOC4-215ENST00000574095 SRGAP1Q7Z6B7 1085 aa29.03■■■□□ 2.24
NPLOC4-215ENST00000574095 MICAL1Q8TDZ2 1067 aa29.03■■■□□ 2.24
NPLOC4-215ENST00000574095 LPPQ93052 612 aa29.03■■■□□ 2.24
NPLOC4-215ENST00000574095 TRAIPQ9BWF2 469 aa29.03■■■□□ 2.24
NPLOC4-215ENST00000574095 FAM105AQ9NUU6 356 aa29.03■■■□□ 2.24
NPLOC4-215ENST00000574095 NCOR1O75376 2440 aa29.03■■■□□ 2.24
NPLOC4-215ENST00000574095 LINC01565O15544 149 aa29.02■■■□□ 2.24
NPLOC4-215ENST00000574095 OR52Z1P0C646 297 aa29.02■■■□□ 2.24
NPLOC4-215ENST00000574095 SPATA31C1P0DKV0 1188 aa29.02■■■□□ 2.24
NPLOC4-215ENST00000574095 PBX3P40426 434 aa29.02■■■□□ 2.24
NPLOC4-215ENST00000574095 RARRES1P49788 294 aa29.02■■■□□ 2.24
NPLOC4-215ENST00000574095 UBE3AQ05086 875 aa29.02■■■□□ 2.24
NPLOC4-215ENST00000574095 DLX2Q07687 328 aaPredicted RBP29.02■■■□□ 2.24
NPLOC4-215ENST00000574095 CSPP1Q1MSJ5 1256 aa29.02■■■□□ 2.24
NPLOC4-215ENST00000574095 KCNT2Q6UVM3 1135 aa29.02■■■□□ 2.24
NPLOC4-215ENST00000574095 CCDC43Q96MW1 224 aaKnown RBP29.02■■■□□ 2.24
NPLOC4-215ENST00000574095 UPF2Q9HAU5 1272 aaKnown RBP29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms