RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 TISP43B9A030 160 aa17.4■□□□□ 0.38
USP43-204ENST00000573955 BACH1O14867 736 aa17.4■□□□□ 0.38
USP43-204ENST00000573955 AFPP02771 609 aaKnown RBP17.4■□□□□ 0.38
USP43-204ENST00000573955 FDX1P10109 184 aa17.4■□□□□ 0.38
USP43-204ENST00000573955 MUTP22033 750 aa17.4■□□□□ 0.38
USP43-204ENST00000573955 CCND2P30279 289 aa17.4■□□□□ 0.38
USP43-204ENST00000573955 GFPT1Q06210 699 aaPredicted RBP17.4■□□□□ 0.38
USP43-204ENST00000573955 TTLL12Q14166 644 aaPredicted RBP17.4■□□□□ 0.38
USP43-204ENST00000573955 CRYMQ14894 314 aa17.4■□□□□ 0.38
USP43-204ENST00000573955 FRMD5Q7Z6J6 570 aa17.4■□□□□ 0.38
USP43-204ENST00000573955 SULF1Q8IWU6 871 aa17.4■□□□□ 0.38
USP43-204ENST00000573955 DCPSQ96C86 337 aaKnown RBP17.4■□□□□ 0.38
USP43-204ENST00000573955 ZNF408Q9H9D4 720 aa17.4■□□□□ 0.38
USP43-204ENST00000573955 CPSF2Q9P2I0 782 aaKnown RBP17.4■□□□□ 0.38
USP43-204ENST00000573955 HDAC6Q9UBN7 1215 aa17.4■□□□□ 0.38
USP43-204ENST00000573955 ODF2LQ9ULJ1 636 aa17.4■□□□□ 0.38
USP43-204ENST00000573955 MYH11P35749 1972 aa17.4■□□□□ 0.38
USP43-204ENST00000573955 EIF3DO15371 548 aaKnown RBP eCLIP17.4■□□□□ 0.38
USP43-204ENST00000573955 ZNF131P52739 623 aa17.4■□□□□ 0.38
USP43-204ENST00000573955 VSIG10LQ86VR7 867 aa17.4■□□□□ 0.38
USP43-204ENST00000573955 IQCDQ96DY2 449 aa17.4■□□□□ 0.38
USP43-204ENST00000573955 IFIH1Q9BYX4 1025 aaKnown RBP17.4■□□□□ 0.38
USP43-204ENST00000573955 PDE11AQ9HCR9 933 aa17.4■□□□□ 0.38
USP43-204ENST00000573955 CYP39A1Q9NYL5 469 aa17.4■□□□□ 0.38
USP43-204ENST00000573955 TLR2O60603 784 aa17.39■□□□□ 0.37
USP43-204ENST00000573955 HNRNPH3P31942 346 aaKnown RBP17.39■□□□□ 0.37
USP43-204ENST00000573955 LONRF2Q1L5Z9 754 aa17.39■□□□□ 0.37
USP43-204ENST00000573955 SFMBT2Q5VUG0 894 aa17.39■□□□□ 0.37
USP43-204ENST00000573955 NLRX1Q86UT6 975 aa17.39■□□□□ 0.37
USP43-204ENST00000573955 ANKRD13CQ8N6S4 541 aa17.39■□□□□ 0.37
USP43-204ENST00000573955 FAM133AQ8N9E0 248 aa17.39■□□□□ 0.37
USP43-204ENST00000573955 ACAD9Q9H845 621 aa17.39■□□□□ 0.37
USP43-204ENST00000573955 ADAMTS5Q9UNA0 930 aa17.39■□□□□ 0.37
USP43-204ENST00000573955 PPP2R3BQ9Y5P8 575 aa17.39■□□□□ 0.37
USP43-204ENST00000573955 KRT86O43790 486 aa17.39■□□□□ 0.37
USP43-204ENST00000573955 CDK17Q00537 523 aa17.39■□□□□ 0.37
USP43-204ENST00000573955 XKR9Q5GH70 373 aa17.39■□□□□ 0.37
USP43-204ENST00000573955 FAM186BQ8IYM0 893 aa17.39■□□□□ 0.37
USP43-204ENST00000573955 NSUN6Q8TEA1 469 aaKnown RBP17.39■□□□□ 0.37
USP43-204ENST00000573955 PCIF1Q9H4Z3 704 aa17.39■□□□□ 0.37
USP43-204ENST00000573955 ELP3Q9H9T3 547 aa17.39■□□□□ 0.37
USP43-204ENST00000573955 WDR64B1ANS9 1081 aa17.38■□□□□ 0.37
USP43-204ENST00000573955 MAP2K7O14733 419 aa17.38■□□□□ 0.37
USP43-204ENST00000573955 EIF3JO75822 258 aaKnown RBP17.38■□□□□ 0.37
USP43-204ENST00000573955 RGS20O76081 388 aa17.38■□□□□ 0.37
USP43-204ENST00000573955 GADL1Q6ZQY3 521 aa17.38■□□□□ 0.37
USP43-204ENST00000573955 HS2ST1Q7LGA3 356 aa17.38■□□□□ 0.37
USP43-204ENST00000573955 SLC35C1Q96A29 364 aa17.38■□□□□ 0.37
USP43-204ENST00000573955 GBP3Q9H0R5 595 aa17.38■□□□□ 0.37
USP43-204ENST00000573955 AGPAT3Q9NRZ7 376 aa17.38■□□□□ 0.37
USP43-204ENST00000573955 SPATS2LQ9NUQ6 558 aaKnown RBP17.38■□□□□ 0.37
USP43-204ENST00000573955 KCND2Q9NZV8 630 aa17.38■□□□□ 0.37
USP43-204ENST00000573955 SEL1LQ9UBV2 794 aa17.38■□□□□ 0.37
USP43-204ENST00000573955 FAN1Q9Y2M0 1017 aa17.38■□□□□ 0.37
USP43-204ENST00000573955 PCDHA13Q9Y5I0 950 aa17.38■□□□□ 0.37
USP43-204ENST00000573955 SOX10P56693 466 aa17.38■□□□□ 0.37
USP43-204ENST00000573955 KIF5AQ12840 1032 aa17.38■□□□□ 0.37
USP43-204ENST00000573955 EXOC3L4Q17RC7 722 aa17.38■□□□□ 0.37
USP43-204ENST00000573955 HGSNATQ68CP4 663 aa17.38■□□□□ 0.37
USP43-204ENST00000573955 GJB7Q6PEY0 223 aa17.38■□□□□ 0.37
USP43-204ENST00000573955 ZNF483Q8TF39 744 aaPredicted RBP17.38■□□□□ 0.37
USP43-204ENST00000573955 OTUD5Q96G74 571 aa17.38■□□□□ 0.37
USP43-204ENST00000573955 HOXC10Q9NYD6 342 aa17.38■□□□□ 0.37
USP43-204ENST00000573955 CDC23Q9UJX2 597 aa17.38■□□□□ 0.37
USP43-204ENST00000573955 PNMA2Q9UL42 364 aa17.38■□□□□ 0.37
USP43-204ENST00000573955 CSADQ9Y600 493 aa17.38■□□□□ 0.37
USP43-204ENST00000573955 ATP1A1P05023 1023 aaKnown RBP17.37■□□□□ 0.37
USP43-204ENST00000573955 TRIM49P0CI25 452 aa17.37■□□□□ 0.37
USP43-204ENST00000573955 TRIM49CP0CI26 452 aa17.37■□□□□ 0.37
USP43-204ENST00000573955 EPHX2P34913 555 aa17.37■□□□□ 0.37
USP43-204ENST00000573955 VAV2P52735 878 aa17.37■□□□□ 0.37
USP43-204ENST00000573955 PSMC5P62195 406 aa17.37■□□□□ 0.37
USP43-204ENST00000573955 CNTN2Q02246 1040 aa17.37■□□□□ 0.37
USP43-204ENST00000573955 FSTL1Q12841 308 aa17.37■□□□□ 0.37
USP43-204ENST00000573955 NOL9Q5SY16 702 aaKnown RBP17.37■□□□□ 0.37
USP43-204ENST00000573955 FAM102BQ5T8I3 360 aa17.37■□□□□ 0.37
USP43-204ENST00000573955 STXBP4Q6ZWJ1 553 aa17.37■□□□□ 0.37
USP43-204ENST00000573955 GANQ9H2C0 597 aa17.37■□□□□ 0.37
USP43-204ENST00000573955 MLXIPQ9HAP2 919 aa17.37■□□□□ 0.37
USP43-204ENST00000573955 SRGAP2O75044 1071 aa17.37■□□□□ 0.37
USP43-204ENST00000573955 PON1P27169 355 aa17.37■□□□□ 0.37
USP43-204ENST00000573955 OAZ1P54368 228 aa17.37■□□□□ 0.37
USP43-204ENST00000573955 PEX3P56589 373 aa17.37■□□□□ 0.37
USP43-204ENST00000573955 GRIK3Q13003 919 aa17.37■□□□□ 0.37
USP43-204ENST00000573955 MKRN3Q13064 507 aaKnown RBP17.37■□□□□ 0.37
USP43-204ENST00000573955 SAMD3Q8N6K7 520 aa17.37■□□□□ 0.37
USP43-204ENST00000573955 CCDC26Q8TAB7 109 aa17.37■□□□□ 0.37
USP43-204ENST00000573955 CABS1Q96KC9 395 aa17.37■□□□□ 0.37
USP43-204ENST00000573955 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.37■□□□□ 0.37
USP43-204ENST00000573955 KIFC3Q9BVG8 833 aa17.37■□□□□ 0.37
USP43-204ENST00000573955 GCNT4Q9P109 453 aa17.37■□□□□ 0.37
USP43-204ENST00000573955 LARSQ9P2J5 1176 aaKnown RBP17.37■□□□□ 0.37
USP43-204ENST00000573955 MYO1AQ9UBC5 1043 aa17.37■□□□□ 0.37
USP43-204ENST00000573955 GABBR1Q9UBS5 961 aa17.37■□□□□ 0.37
USP43-204ENST00000573955 SLC16A4O15374 487 aa17.36■□□□□ 0.37
USP43-204ENST00000573955 SLC16A3O15427 465 aaKnown RBP17.36■□□□□ 0.37
USP43-204ENST00000573955 PSMC2P35998 433 aaKnown RBP17.36■□□□□ 0.37
USP43-204ENST00000573955 CCNHP51946 323 aaPredicted RBP17.36■□□□□ 0.37
USP43-204ENST00000573955 JAK3P52333 1124 aa17.36■□□□□ 0.37
USP43-204ENST00000573955 RWDD2BP57060 319 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms