RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 STC2O76061 302 aa4.86□□□□□ -1.63
ERCC4-204ENST00000573018 SCAF4O95104 1147 aaKnown RBP4.86□□□□□ -1.63
ERCC4-204ENST00000573018 ZFP36P26651 326 aaKnown RBP4.86□□□□□ -1.63
ERCC4-204ENST00000573018 PTTG1IPP53801 180 aa4.86□□□□□ -1.63
ERCC4-204ENST00000573018 KRTAP10-9P60411 292 aa4.86□□□□□ -1.63
ERCC4-204ENST00000573018 SLC6A3Q01959 620 aa4.86□□□□□ -1.63
ERCC4-204ENST00000573018 GAGE13Q4V321 117 aa4.86□□□□□ -1.63
ERCC4-204ENST00000573018 RD3Q7Z3Z2 195 aa4.86□□□□□ -1.63
ERCC4-204ENST00000573018 RTN4RL1Q86UN2 441 aaPredicted RBP4.86□□□□□ -1.63
ERCC4-204ENST00000573018 PLA2G15Q8NCC3 412 aa4.86□□□□□ -1.63
ERCC4-204ENST00000573018 NKD2Q969F2 451 aaPredicted RBP4.86□□□□□ -1.63
ERCC4-204ENST00000573018 IPO9Q96P70 1041 aaKnown RBP4.86□□□□□ -1.63
ERCC4-204ENST00000573018 ZNF768Q9H5H4 540 aaKnown RBP4.86□□□□□ -1.63
ERCC4-204ENST00000573018 A0A0A6YYK5 440 aaPredicted RBP4.85□□□□□ -1.63
ERCC4-204ENST00000573018 SLC12A8A0AV02 714 aa4.85□□□□□ -1.63
ERCC4-204ENST00000573018 HIP1RO75146 1068 aa4.85□□□□□ -1.63
ERCC4-204ENST00000573018 VSIG10L2P0DP72 767 aa4.85□□□□□ -1.63
ERCC4-204ENST00000573018 TCF3P15923 654 aa4.85□□□□□ -1.63
ERCC4-204ENST00000573018 GABREP78334 506 aa4.85□□□□□ -1.63
ERCC4-204ENST00000573018 DGKDQ16760 1214 aa4.85□□□□□ -1.63
ERCC4-204ENST00000573018 PLEKHG4Q58EX7 1191 aa4.85□□□□□ -1.63
ERCC4-204ENST00000573018 ST8SIA2Q92186 375 aa4.85□□□□□ -1.63
ERCC4-204ENST00000573018 FAM193BQ96PV7 902 aaPredicted RBP4.85□□□□□ -1.63
ERCC4-204ENST00000573018 FOXB1Q99853 325 aa4.85□□□□□ -1.63
ERCC4-204ENST00000573018 TINF2Q9BSI4 451 aa4.85□□□□□ -1.63
ERCC4-204ENST00000573018 R3HDMLQ9H3Y0 253 aa4.85□□□□□ -1.63
ERCC4-204ENST00000573018 PRDM13Q9H4Q3 707 aa4.85□□□□□ -1.63
ERCC4-204ENST00000573018 SFMBT1Q9UHJ3 866 aa4.85□□□□□ -1.63
ERCC4-204ENST00000573018 DNAI1Q9UI46 699 aa4.85□□□□□ -1.63
ERCC4-204ENST00000573018 SPATA31A6Q5VVP1 1343 aa4.84□□□□□ -1.63
ERCC4-204ENST00000573018 CENPVL1A0A0U1RR11 272 aa4.84□□□□□ -1.63
ERCC4-204ENST00000573018 E9PSI1 815 aa4.84□□□□□ -1.63
ERCC4-204ENST00000573018 CDK4P11802 303 aa4.84□□□□□ -1.63
ERCC4-204ENST00000573018 GNAT2P19087 354 aa4.84□□□□□ -1.63
ERCC4-204ENST00000573018 RAB33AQ14088 237 aa4.84□□□□□ -1.63
ERCC4-204ENST00000573018 FAM214AQ32MH5 1076 aa4.84□□□□□ -1.63
ERCC4-204ENST00000573018 Q6YL49 198 aa4.84□□□□□ -1.63
ERCC4-204ENST00000573018 BHLHA9Q7RTU4 235 aa4.84□□□□□ -1.63
ERCC4-204ENST00000573018 CLEC14AQ86T13 490 aa4.84□□□□□ -1.63
ERCC4-204ENST00000573018 EXOC2Q96KP1 924 aa4.84□□□□□ -1.63
ERCC4-204ENST00000573018 RSAD1Q9HA92 442 aa4.84□□□□□ -1.63
ERCC4-204ENST00000573018 ANKFY1Q9P2R3 1169 aa4.84□□□□□ -1.63
ERCC4-204ENST00000573018 NDOR1Q9UHB4 597 aa4.84□□□□□ -1.63
ERCC4-204ENST00000573018 PPFIA4O75335 1185 aa4.83□□□□□ -1.64
ERCC4-204ENST00000573018 PRLP01236 227 aa4.83□□□□□ -1.64
ERCC4-204ENST00000573018 HNRNPLP14866 589 aaKnown RBP eCLIP4.83□□□□□ -1.64
ERCC4-204ENST00000573018 LAG3P18627 525 aa4.83□□□□□ -1.64
ERCC4-204ENST00000573018 NPEPPSP55786 919 aa4.83□□□□□ -1.64
ERCC4-204ENST00000573018 IRF9Q00978 393 aa4.83□□□□□ -1.64
ERCC4-204ENST00000573018 ROM1Q03395 351 aa4.83□□□□□ -1.64
ERCC4-204ENST00000573018 SSRP1Q08945 709 aaKnown RBP4.83□□□□□ -1.64
ERCC4-204ENST00000573018 SPIDRQ14159 915 aa4.83□□□□□ -1.64
ERCC4-204ENST00000573018 EPHA10Q5JZY3 1008 aa4.83□□□□□ -1.64
ERCC4-204ENST00000573018 PAPD7Q5XG87 772 aaKnown RBP4.83□□□□□ -1.64
ERCC4-204ENST00000573018 NAIF1Q69YI7 327 aaPredicted RBP4.83□□□□□ -1.64
ERCC4-204ENST00000573018 OVCH1Q7RTY7 1134 aa4.83□□□□□ -1.64
ERCC4-204ENST00000573018 LRP10Q7Z4F1 713 aa4.83□□□□□ -1.64
ERCC4-204ENST00000573018 ZBTB38Q8NAP3 1195 aaPredicted RBP4.83□□□□□ -1.64
ERCC4-204ENST00000573018 ZNF669Q96BR6 464 aaPredicted RBP4.83□□□□□ -1.64
ERCC4-204ENST00000573018 DYDC2Q96IM9 177 aa4.83□□□□□ -1.64
ERCC4-204ENST00000573018 WDR92Q96MX6 357 aa4.83□□□□□ -1.64
ERCC4-204ENST00000573018 SLC52A2Q9HAB3 445 aa4.83□□□□□ -1.64
ERCC4-204ENST00000573018 POLR3BQ9NW08 1133 aaPredicted RBP4.83□□□□□ -1.64
ERCC4-204ENST00000573018 EIF2B4Q9UI10 523 aaKnown RBP4.83□□□□□ -1.64
ERCC4-204ENST00000573018 COX11Q9Y6N1 276 aa4.83□□□□□ -1.64
ERCC4-204ENST00000573018 INO80B-WBP1J3KQ70 363 aa4.82□□□□□ -1.64
ERCC4-204ENST00000573018 KRT37O76014 449 aa4.82□□□□□ -1.64
ERCC4-204ENST00000573018 RECQL4O94761 1208 aa4.82□□□□□ -1.64
ERCC4-204ENST00000573018 JUNP05412 331 aaKnown RBP4.82□□□□□ -1.64
ERCC4-204ENST00000573018 ZEB1P37275 1124 aaPredicted RBP4.82□□□□□ -1.64
ERCC4-204ENST00000573018 FAM189BP81408 668 aa4.82□□□□□ -1.64
ERCC4-204ENST00000573018 MTERF2Q49AM1 385 aa4.82□□□□□ -1.64
ERCC4-204ENST00000573018 DCAF17Q5H9S7 520 aaPredicted RBP4.82□□□□□ -1.64
ERCC4-204ENST00000573018 CMTM4Q8IZR5 234 aa4.82□□□□□ -1.64
ERCC4-204ENST00000573018 SUPT20HQ8NEM7 779 aa4.82□□□□□ -1.64
ERCC4-204ENST00000573018 TRIM55Q9BYV6 548 aa4.82□□□□□ -1.64
ERCC4-204ENST00000573018 CELF4Q9BZC1 486 aaKnown RBP4.82□□□□□ -1.64
ERCC4-204ENST00000573018 WDR11Q9BZH6 1224 aa4.82□□□□□ -1.64
ERCC4-204ENST00000573018 INO80BQ9C086 356 aaPredicted RBP4.82□□□□□ -1.64
ERCC4-204ENST00000573018 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.81□□□□□ -1.64
ERCC4-204ENST00000573018 CCDC85CA6NKD9 419 aa4.81□□□□□ -1.64
ERCC4-204ENST00000573018 AHRRA9YTQ3 701 aa4.81□□□□□ -1.64
ERCC4-204ENST00000573018 TRIM24O15164 1050 aa4.81□□□□□ -1.64
ERCC4-204ENST00000573018 DIAPH1O60610 1272 aaKnown RBP4.81□□□□□ -1.64
ERCC4-204ENST00000573018 FAM153BP0C7A2 387 aa4.81□□□□□ -1.64
ERCC4-204ENST00000573018 GYPEP15421 78 aa4.81□□□□□ -1.64
ERCC4-204ENST00000573018 PTH2RP49190 550 aa4.81□□□□□ -1.64
ERCC4-204ENST00000573018 USP14P54578 494 aa4.81□□□□□ -1.64
ERCC4-204ENST00000573018 SP5Q6BEB4 398 aaPredicted RBP4.81□□□□□ -1.64
ERCC4-204ENST00000573018 SLFN12LQ6IEE8 588 aa4.81□□□□□ -1.64
ERCC4-204ENST00000573018 FBXO42Q6P3S6 717 aa4.81□□□□□ -1.64
ERCC4-204ENST00000573018 C2orf69Q8N8R5 385 aa4.81□□□□□ -1.64
ERCC4-204ENST00000573018 C16orf92Q96LL3 132 aa4.81□□□□□ -1.64
ERCC4-204ENST00000573018 DHRS4Q9BTZ2 278 aa4.81□□□□□ -1.64
ERCC4-204ENST00000573018 SERHL2Q9H4I8 314 aa4.81□□□□□ -1.64
ERCC4-204ENST00000573018 MRPS23Q9Y3D9 190 aaKnown RBP4.81□□□□□ -1.64
ERCC4-204ENST00000573018 POLR2AP24928 1970 aaKnown RBP4.8□□□□□ -1.64
ERCC4-204ENST00000573018 PDPK1O15530 556 aa4.8□□□□□ -1.64
ERCC4-204ENST00000573018 DAPK3O43293 454 aa4.8□□□□□ -1.64
ERCC4-204ENST00000573018 KIR2DL3P43628 341 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms