RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 LONRF3Q496Y0 759 aa16.06■□□□□ 0.16
NPLOC4-209ENST00000572760 ARSHQ5FYA8 562 aa16.06■□□□□ 0.16
NPLOC4-209ENST00000572760 ODR4Q5SWX8 454 aa16.06■□□□□ 0.16
NPLOC4-209ENST00000572760 ASAP3Q8TDY4 903 aa16.06■□□□□ 0.16
NPLOC4-209ENST00000572760 DDX12PQ92771 950 aa16.06■□□□□ 0.16
NPLOC4-209ENST00000572760 REEP2Q9BRK0 252 aa16.06■□□□□ 0.16
NPLOC4-209ENST00000572760 FDXACB1Q9BRP7 624 aaPredicted RBP16.06■□□□□ 0.16
NPLOC4-209ENST00000572760 INO80BQ9C086 356 aaPredicted RBP16.06■□□□□ 0.16
NPLOC4-209ENST00000572760 KBTBD4Q9NVX7 518 aa16.06■□□□□ 0.16
NPLOC4-209ENST00000572760 ODF2LQ9ULJ1 636 aa16.06■□□□□ 0.16
NPLOC4-209ENST00000572760 CCDC169A6NNP5 214 aa16.05■□□□□ 0.16
NPLOC4-209ENST00000572760 SFI1A8K8P3 1242 aa16.05■□□□□ 0.16
NPLOC4-209ENST00000572760 H0YGN5 161 aa16.05■□□□□ 0.16
NPLOC4-209ENST00000572760 GPR32O75388 356 aa16.05■□□□□ 0.16
NPLOC4-209ENST00000572760 RPS6KA5O75582 802 aa16.05■□□□□ 0.16
NPLOC4-209ENST00000572760 GHRP10912 638 aa16.05■□□□□ 0.16
NPLOC4-209ENST00000572760 PHKA2P46019 1235 aa16.05■□□□□ 0.16
NPLOC4-209ENST00000572760 PEX3P56589 373 aa16.05■□□□□ 0.16
NPLOC4-209ENST00000572760 ASIC1P78348 528 aa16.05■□□□□ 0.16
NPLOC4-209ENST00000572760 DMP1Q13316 513 aaPredicted RBP16.05■□□□□ 0.16
NPLOC4-209ENST00000572760 GIT2Q14161 759 aa16.05■□□□□ 0.16
NPLOC4-209ENST00000572760 FBXO47Q5MNV8 452 aa16.05■□□□□ 0.16
NPLOC4-209ENST00000572760 KANK3Q6NY19 840 aa16.05■□□□□ 0.16
NPLOC4-209ENST00000572760 TRAF7Q6Q0C0 670 aa16.05■□□□□ 0.16
NPLOC4-209ENST00000572760 KRBA2Q6ZNG9 492 aa16.05■□□□□ 0.16
NPLOC4-209ENST00000572760 ZBTB8OSQ8IWT0 167 aa16.05■□□□□ 0.16
NPLOC4-209ENST00000572760 MYCT1Q8N699 235 aa16.05■□□□□ 0.16
NPLOC4-209ENST00000572760 USP38Q8NB14 1042 aa16.05■□□□□ 0.16
NPLOC4-209ENST00000572760 DEPTORQ8TB45 409 aa16.05■□□□□ 0.16
NPLOC4-209ENST00000572760 ADAMTS10Q9H324 1103 aa16.05■□□□□ 0.16
NPLOC4-209ENST00000572760 C17orf75Q9HAS0 396 aa16.05■□□□□ 0.16
NPLOC4-209ENST00000572760 CDHR5Q9HBB8 845 aa16.05■□□□□ 0.16
NPLOC4-209ENST00000572760 PCDH10Q9P2E7 1040 aa16.05■□□□□ 0.16
NPLOC4-209ENST00000572760 LARSQ9P2J5 1176 aaKnown RBP16.05■□□□□ 0.16
NPLOC4-209ENST00000572760 MICAL3Q7RTP6 2002 aa16.04■□□□□ 0.16
NPLOC4-209ENST00000572760 ACTN4O43707 911 aaKnown RBP16.04■□□□□ 0.16
NPLOC4-209ENST00000572760 KINO60870 393 aaKnown RBP16.04■□□□□ 0.16
NPLOC4-209ENST00000572760 LIG1P18858 919 aa16.04■□□□□ 0.16
NPLOC4-209ENST00000572760 EIF4BP23588 611 aaKnown RBP16.04■□□□□ 0.16
NPLOC4-209ENST00000572760 NAMPTP43490 491 aa16.04■□□□□ 0.16
NPLOC4-209ENST00000572760 SMTNP53814 917 aa16.04■□□□□ 0.16
NPLOC4-209ENST00000572760 NFX1Q12986 1120 aaKnown RBP16.04■□□□□ 0.16
NPLOC4-209ENST00000572760 PAK2Q13177 524 aa16.04■□□□□ 0.16
NPLOC4-209ENST00000572760 CAPSQ13938 189 aa16.04■□□□□ 0.16
NPLOC4-209ENST00000572760 SRGAP1Q7Z6B7 1085 aa16.04■□□□□ 0.16
NPLOC4-209ENST00000572760 CCDC65Q8IXS2 484 aa16.04■□□□□ 0.16
NPLOC4-209ENST00000572760 FMR1NBQ8N0W7 255 aaPredicted RBP16.04■□□□□ 0.16
NPLOC4-209ENST00000572760 PAGE5Q96GU1 130 aa16.04■□□□□ 0.16
NPLOC4-209ENST00000572760 PARVGQ9HBI0 331 aa16.04■□□□□ 0.16
NPLOC4-209ENST00000572760 IL23AQ9NPF7 189 aa16.04■□□□□ 0.16
NPLOC4-209ENST00000572760 KMT5AQ9NQR1 393 aa16.04■□□□□ 0.16
NPLOC4-209ENST00000572760 SQORQ9Y6N5 450 aa16.04■□□□□ 0.16
NPLOC4-209ENST00000572760 INO80B-WBP1J3KQ70 363 aa16.03■□□□□ 0.16
NPLOC4-209ENST00000572760 GPR182O15218 404 aa16.03■□□□□ 0.16
NPLOC4-209ENST00000572760 NBNO60934 754 aa16.03■□□□□ 0.16
NPLOC4-209ENST00000572760 PFKMP08237 780 aa16.03■□□□□ 0.16
NPLOC4-209ENST00000572760 ACRP10323 421 aa16.03■□□□□ 0.16
NPLOC4-209ENST00000572760 ACTN1P12814 892 aa16.03■□□□□ 0.16
NPLOC4-209ENST00000572760 PLS3P13797 630 aa16.03■□□□□ 0.16
NPLOC4-209ENST00000572760 DARSP14868 501 aaKnown RBP16.03■□□□□ 0.16
NPLOC4-209ENST00000572760 MAGEA10P43363 369 aaPredicted RBP16.03■□□□□ 0.16
NPLOC4-209ENST00000572760 PTENP60484 403 aa16.03■□□□□ 0.16
NPLOC4-209ENST00000572760 POU5F1BQ06416 359 aa16.03■□□□□ 0.16
NPLOC4-209ENST00000572760 MAPK7Q13164 816 aa16.03■□□□□ 0.16
NPLOC4-209ENST00000572760 LPIN1Q14693 890 aa16.03■□□□□ 0.16
NPLOC4-209ENST00000572760 MBTPS1Q14703 1052 aa16.03■□□□□ 0.16
NPLOC4-209ENST00000572760 TSHZ1Q6ZSZ6 1077 aa16.03■□□□□ 0.16
NPLOC4-209ENST00000572760 GRAMD1CQ8IYS0 662 aa16.03■□□□□ 0.16
NPLOC4-209ENST00000572760 DAW1Q8N136 415 aa16.03■□□□□ 0.16
NPLOC4-209ENST00000572760 BSNDQ8WZ55 320 aa16.03■□□□□ 0.16
NPLOC4-209ENST00000572760 SEPT8Q92599 483 aa16.03■□□□□ 0.16
NPLOC4-209ENST00000572760 C7orf25Q9BPX7 421 aa16.03■□□□□ 0.16
NPLOC4-209ENST00000572760 IFIH1Q9BYX4 1025 aaKnown RBP16.03■□□□□ 0.16
NPLOC4-209ENST00000572760 TRIM9Q9C026 710 aa16.03■□□□□ 0.16
NPLOC4-209ENST00000572760 C2orf40Q9H1Z8 148 aa16.03■□□□□ 0.16
NPLOC4-209ENST00000572760 BLZF1Q9H2G9 400 aa16.03■□□□□ 0.16
NPLOC4-209ENST00000572760 PANK4Q9NVE7 773 aa16.03■□□□□ 0.16
NPLOC4-209ENST00000572760 HOOK1Q9UJC3 728 aaKnown RBP16.03■□□□□ 0.16
NPLOC4-209ENST00000572760 NOC2LQ9Y3T9 749 aaKnown RBP16.03■□□□□ 0.16
NPLOC4-209ENST00000572760 GTPBP6O43824 516 aaPredicted RBP16.02■□□□□ 0.16
NPLOC4-209ENST00000572760 NR1I2O75469 434 aa16.02■□□□□ 0.16
NPLOC4-209ENST00000572760 GAP43P17677 238 aa16.02■□□□□ 0.16
NPLOC4-209ENST00000572760 SFPQP23246 707 aaKnown RBP eCLIP16.02■□□□□ 0.16
NPLOC4-209ENST00000572760 CD52P31358 61 aa16.02■□□□□ 0.16
NPLOC4-209ENST00000572760 HERC4Q5GLZ8 1057 aaPredicted RBP16.02■□□□□ 0.16
NPLOC4-209ENST00000572760 CATSPER4Q7RTX7 472 aa16.02■□□□□ 0.16
NPLOC4-209ENST00000572760 ENGASEQ8NFI3 743 aa16.02■□□□□ 0.16
NPLOC4-209ENST00000572760 TMEM40Q8WWA1 233 aa16.02■□□□□ 0.16
NPLOC4-209ENST00000572760 CCDC47Q96A33 483 aaKnown RBP16.02■□□□□ 0.16
NPLOC4-209ENST00000572760 DNAJC19Q96DA6 116 aa16.02■□□□□ 0.16
NPLOC4-209ENST00000572760 TIGD1Q96MW7 591 aa16.02■□□□□ 0.16
NPLOC4-209ENST00000572760 IFT122Q9HBG6 1241 aa16.02■□□□□ 0.16
NPLOC4-209ENST00000572760 LMBRD1Q9NUN5 540 aa16.02■□□□□ 0.16
NPLOC4-209ENST00000572760 ST3GAL5Q9UNP4 418 aa16.02■□□□□ 0.16
NPLOC4-209ENST00000572760 MKI67P46013 3256 aaKnown RBP16.02■□□□□ 0.15
NPLOC4-209ENST00000572760 H0YCG3 227 aa16.01■□□□□ 0.15
NPLOC4-209ENST00000572760 TRAK2O60296 914 aa16.01■□□□□ 0.15
NPLOC4-209ENST00000572760 CSDE1O75534 798 aaKnown RBP16.01■□□□□ 0.15
NPLOC4-209ENST00000572760 ERLIN2O94905 339 aa16.01■□□□□ 0.15
NPLOC4-209ENST00000572760 FGBP02675 491 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms