RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 CCDC15Q0P6D6 951 aa18.15■□□□□ 0.5
LITAF-209ENST00000571688 HERC4Q5GLZ8 1057 aaPredicted RBP18.15■□□□□ 0.5
LITAF-209ENST00000571688 HYIQ5T013 277 aa18.15■□□□□ 0.5
LITAF-209ENST00000571688 RNF43Q68DV7 783 aa18.15■□□□□ 0.5
LITAF-209ENST00000571688 SEC63Q9UGP8 760 aaKnown RBP18.15■□□□□ 0.5
LITAF-209ENST00000571688 PCYOX1Q9UHG3 505 aa18.15■□□□□ 0.5
LITAF-209ENST00000571688 PODXLO00592 558 aa18.15■□□□□ 0.5
LITAF-209ENST00000571688 KRT13P13646 458 aa18.15■□□□□ 0.5
LITAF-209ENST00000571688 CHRNA3P32297 505 aa18.15■□□□□ 0.5
LITAF-209ENST00000571688 CWF19L1Q69YN2 538 aaKnown RBP18.15■□□□□ 0.5
LITAF-209ENST00000571688 CGB2Q6NT52 195 aa18.15■□□□□ 0.5
LITAF-209ENST00000571688 RNPEPL1Q9HAU8 725 aa18.15■□□□□ 0.5
LITAF-209ENST00000571688 ANKIB1Q9P2G1 1089 aa18.15■□□□□ 0.5
LITAF-209ENST00000571688 NTSR2O95665 410 aa18.14■□□□□ 0.49
LITAF-209ENST00000571688 ALAS1P13196 640 aa18.14■□□□□ 0.49
LITAF-209ENST00000571688 PRDX5P30044 214 aa18.14■□□□□ 0.49
LITAF-209ENST00000571688 ZNF568Q3ZCX4 644 aa18.14■□□□□ 0.49
LITAF-209ENST00000571688 FBXO33Q7Z6M2 555 aa18.14■□□□□ 0.49
LITAF-209ENST00000571688 MFN1Q8IWA4 741 aa18.14■□□□□ 0.49
LITAF-209ENST00000571688 ALG3Q92685 438 aa18.14■□□□□ 0.49
LITAF-209ENST00000571688 RUNDC3BQ96NL0 473 aa18.14■□□□□ 0.49
LITAF-209ENST00000571688 PIGSQ96S52 555 aa18.14■□□□□ 0.49
LITAF-209ENST00000571688 RTCBQ9Y3I0 505 aaKnown RBP18.14■□□□□ 0.49
LITAF-209ENST00000571688 NPHP3-ACAD11A0A0J9YXS1 232 aa18.14■□□□□ 0.49
LITAF-209ENST00000571688 CREB1P16220 341 aa18.14■□□□□ 0.49
LITAF-209ENST00000571688 ATF3P18847 181 aa18.14■□□□□ 0.49
LITAF-209ENST00000571688 PAPOLAP51003 745 aaKnown RBP18.14■□□□□ 0.49
LITAF-209ENST00000571688 MRPS35P82673 323 aaKnown RBP18.14■□□□□ 0.49
LITAF-209ENST00000571688 CACNB1Q02641 598 aaPredicted RBP18.14■□□□□ 0.49
LITAF-209ENST00000571688 MKRN3Q13064 507 aaKnown RBP18.14■□□□□ 0.49
LITAF-209ENST00000571688 PARP6Q2NL67 630 aa18.14■□□□□ 0.49
LITAF-209ENST00000571688 PARP10Q53GL7 1025 aa18.14■□□□□ 0.49
LITAF-209ENST00000571688 MAEAQ7L5Y9 396 aa18.14■□□□□ 0.49
LITAF-209ENST00000571688 APLFQ8IW19 511 aaPredicted RBP18.14■□□□□ 0.49
LITAF-209ENST00000571688 ARHGEF2Q92974 986 aaKnown RBP18.14■□□□□ 0.49
LITAF-209ENST00000571688 NLRP3Q96P20 1036 aa18.14■□□□□ 0.49
LITAF-209ENST00000571688 TSC22D3Q99576 134 aa18.14■□□□□ 0.49
LITAF-209ENST00000571688 TRAF3IP3Q9Y228 551 aa18.14■□□□□ 0.49
LITAF-209ENST00000571688 PFASO15067 1338 aa18.13■□□□□ 0.49
LITAF-209ENST00000571688 XRCC5P13010 732 aaKnown RBP18.13■□□□□ 0.49
LITAF-209ENST00000571688 HSPA6P17066 643 aa18.13■□□□□ 0.49
LITAF-209ENST00000571688 CALB2P22676 271 aa18.13■□□□□ 0.49
LITAF-209ENST00000571688 SMARCA1P28370 1054 aa18.13■□□□□ 0.49
LITAF-209ENST00000571688 ACVR2BQ13705 512 aa18.13■□□□□ 0.49
LITAF-209ENST00000571688 GJB7Q6PEY0 223 aa18.13■□□□□ 0.49
LITAF-209ENST00000571688 PRELID2Q8N945 189 aa18.13■□□□□ 0.49
LITAF-209ENST00000571688 TAF1P21675 1872 aa18.13■□□□□ 0.49
LITAF-209ENST00000571688 EIF4E1BA6NMX2 242 aaKnown RBP18.13■□□□□ 0.49
LITAF-209ENST00000571688 E9PMD0 336 aa18.13■□□□□ 0.49
LITAF-209ENST00000571688 MPHOSPH10O00566 681 aaKnown RBP18.13■□□□□ 0.49
LITAF-209ENST00000571688 PEX11AO75192 247 aa18.13■□□□□ 0.49
LITAF-209ENST00000571688 NPTXRO95502 500 aa18.13■□□□□ 0.49
LITAF-209ENST00000571688 CTNNA2P26232 953 aa18.13■□□□□ 0.49
LITAF-209ENST00000571688 TRIM68Q6AZZ1 485 aa18.13■□□□□ 0.49
LITAF-209ENST00000571688 CTNNBL1Q8WYA6 563 aaPredicted RBP18.13■□□□□ 0.49
LITAF-209ENST00000571688 ART4Q93070 314 aa18.13■□□□□ 0.49
LITAF-209ENST00000571688 NT5C3AQ9H0P0 336 aa18.13■□□□□ 0.49
LITAF-209ENST00000571688 ETNK1Q9HBU6 452 aa18.13■□□□□ 0.49
LITAF-209ENST00000571688 PAPOLBQ9NRJ5 636 aaKnown RBP18.13■□□□□ 0.49
LITAF-209ENST00000571688 SYNGAP1Q96PV0 1343 aa18.13■□□□□ 0.49
LITAF-209ENST00000571688 KDM3AQ9Y4C1 1321 aa18.13■□□□□ 0.49
LITAF-209ENST00000571688 PLA2G4BP0C869 781 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 LMNB1P20700 586 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 ATP6V1C1P21283 382 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 LMNB2Q03252 620 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 TRAF1Q13077 416 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 LONRF1Q17RB8 773 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 TTC27Q6P3X3 843 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 OTUD6AQ7L8S5 288 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 GPBP1Q86WP2 473 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 ZNF444Q8N0Y2 327 aaPredicted RBP18.12■□□□□ 0.49
LITAF-209ENST00000571688 FBF1Q8TES7 1133 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 HAS1Q92839 578 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 SERPINB12Q96P63 405 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 KLHL14Q9P2G3 628 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 ZMYND8Q9ULU4 1186 aaPredicted RBP18.12■□□□□ 0.49
LITAF-209ENST00000571688 LRRD1A4D1F6 860 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 UPP2O95045 317 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 GNAT1P11488 350 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 PLCG2P16885 1265 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 CYP11B2P19099 503 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 RPS6KA3P51812 740 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 ROR2Q01974 943 aaKnown RBP18.12■□□□□ 0.49
LITAF-209ENST00000571688 LBRQ14739 615 aaKnown RBP18.12■□□□□ 0.49
LITAF-209ENST00000571688 SGSM1Q2NKQ1 1148 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 AADACL2Q6P093 401 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 USP17L2Q6R6M4 530 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 ECHDC2Q86YB7 292 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 GLYCTKQ8IVS8 523 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 LMNTD2Q8IXW0 634 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 ARHGEF26Q96DR7 871 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 CRAMP1Q96RY5 1269 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 VAT1LQ9HCJ6 419 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 TXLNGQ9NUQ3 528 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 TMOD4Q9NZQ9 345 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 GCNT4Q9P109 453 aa18.12■□□□□ 0.49
LITAF-209ENST00000571688 GPR75-ASB3A0A0A6YYF3 556 aa18.11■□□□□ 0.49
LITAF-209ENST00000571688 TPBGLP0DKB5 382 aa18.11■□□□□ 0.49
LITAF-209ENST00000571688 STAT1P42224 750 aa18.11■□□□□ 0.49
LITAF-209ENST00000571688 CASP5P51878 434 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms