RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 EML1O00423 815 aa19.74■□□□□ 0.75
CIITA-206ENST00000571190 MAFO75444 373 aaPredicted RBP19.74■□□□□ 0.75
CIITA-206ENST00000571190 PPM1AP35813 382 aa19.74■□□□□ 0.75
CIITA-206ENST00000571190 TECP42680 631 aa19.74■□□□□ 0.75
CIITA-206ENST00000571190 NHLH1Q02575 133 aa19.74■□□□□ 0.75
CIITA-206ENST00000571190 STK3Q13188 491 aa19.74■□□□□ 0.75
CIITA-206ENST00000571190 INF2Q27J81 1249 aa19.74■□□□□ 0.75
CIITA-206ENST00000571190 LLGL2Q6P1M3 1020 aa19.74■□□□□ 0.75
CIITA-206ENST00000571190 TMC7Q7Z402 723 aa19.74■□□□□ 0.75
CIITA-206ENST00000571190 MRPL43Q8N983 215 aaKnown RBP19.74■□□□□ 0.75
CIITA-206ENST00000571190 MFSD14AQ96MC6 490 aa19.74■□□□□ 0.75
CIITA-206ENST00000571190 TRAIPQ9BWF2 469 aa19.74■□□□□ 0.75
CIITA-206ENST00000571190 APOL5Q9BWW9 433 aa19.74■□□□□ 0.75
CIITA-206ENST00000571190 GCOM2Q9BZD3 368 aaPredicted RBP19.74■□□□□ 0.75
CIITA-206ENST00000571190 CDH22Q9UJ99 828 aa19.74■□□□□ 0.75
CIITA-206ENST00000571190 KCNJ14Q9UNX9 436 aa19.74■□□□□ 0.75
CIITA-206ENST00000571190 TMEM221A6NGB7 291 aa19.73■□□□□ 0.75
CIITA-206ENST00000571190 DDX11L8A8MPP1 907 aa19.73■□□□□ 0.75
CIITA-206ENST00000571190 NT5C1B-RDH14C9J2C7 533 aa19.73■□□□□ 0.75
CIITA-206ENST00000571190 M0R296 226 aa19.73■□□□□ 0.75
CIITA-206ENST00000571190 CPLX1O14810 134 aa19.73■□□□□ 0.75
CIITA-206ENST00000571190 PHKA2P46019 1235 aa19.73■□□□□ 0.75
CIITA-206ENST00000571190 KRT17Q04695 432 aa19.73■□□□□ 0.75
CIITA-206ENST00000571190 NONOQ15233 471 aaKnown RBP eCLIP19.73■□□□□ 0.75
CIITA-206ENST00000571190 KSR1Q8IVT5 923 aa19.73■□□□□ 0.75
CIITA-206ENST00000571190 ZNF579Q8NAF0 562 aaKnown RBP19.73■□□□□ 0.75
CIITA-206ENST00000571190 CHST12Q9NRB3 414 aa19.73■□□□□ 0.75
CIITA-206ENST00000571190 DACT1Q9NYF0 836 aa19.73■□□□□ 0.75
CIITA-206ENST00000571190 SUCLA2Q9P2R7 463 aaPredicted RBP19.73■□□□□ 0.75
CIITA-206ENST00000571190 DDX25Q9UHL0 483 aaKnown RBP19.73■□□□□ 0.75
CIITA-206ENST00000571190 C5orf42Q9H799 3197 aa19.72■□□□□ 0.75
CIITA-206ENST00000571190 C2orf71A6NGG8 1288 aa19.72■□□□□ 0.75
CIITA-206ENST00000571190 MEIS3P2A8K0S8 358 aa19.72■□□□□ 0.75
CIITA-206ENST00000571190 DTNBO60941 627 aa19.72■□□□□ 0.75
CIITA-206ENST00000571190 BCAR1P56945 870 aa19.72■□□□□ 0.75
CIITA-206ENST00000571190 CDC42EP1Q00587 391 aa19.72■□□□□ 0.75
CIITA-206ENST00000571190 PLA2G4FQ68DD2 849 aa19.72■□□□□ 0.75
CIITA-206ENST00000571190 GALNT17Q6IS24 598 aa19.72■□□□□ 0.75
CIITA-206ENST00000571190 TMEM173Q86WV6 379 aaPredicted RBP19.72■□□□□ 0.75
CIITA-206ENST00000571190 FAM177A1Q8N128 213 aaPredicted RBP19.72■□□□□ 0.75
CIITA-206ENST00000571190 LPPQ93052 612 aa19.72■□□□□ 0.75
CIITA-206ENST00000571190 PHF20Q9BVI0 1012 aa19.72■□□□□ 0.75
CIITA-206ENST00000571190 PLXNA4Q9HCM2 1894 aa19.72■□□□□ 0.75
CIITA-206ENST00000571190 KCNMB3Q9NPA1 279 aa19.72■□□□□ 0.75
CIITA-206ENST00000571190 WRAP73Q9P2S5 460 aaPredicted RBP19.72■□□□□ 0.75
CIITA-206ENST00000571190 VAV3Q9UKW4 847 aa19.72■□□□□ 0.75
CIITA-206ENST00000571190 HOXB8P17481 243 aaPredicted RBP19.71■□□□□ 0.75
CIITA-206ENST00000571190 DNM2P50570 870 aa19.71■□□□□ 0.75
CIITA-206ENST00000571190 NPEPPSP55786 919 aa19.71■□□□□ 0.75
CIITA-206ENST00000571190 PSMC5P62195 406 aa19.71■□□□□ 0.75
CIITA-206ENST00000571190 LONRF3Q496Y0 759 aa19.71■□□□□ 0.75
CIITA-206ENST00000571190 IER5LQ5T953 404 aa19.71■□□□□ 0.75
CIITA-206ENST00000571190 KRT25Q7Z3Z0 450 aa19.71■□□□□ 0.75
CIITA-206ENST00000571190 ZNF410Q86VK4 478 aa19.71■□□□□ 0.75
CIITA-206ENST00000571190 RHPN2Q8IUC4 686 aa19.71■□□□□ 0.75
CIITA-206ENST00000571190 IFT122Q9HBG6 1241 aa19.71■□□□□ 0.75
CIITA-206ENST00000571190 GJB4Q9NTQ9 266 aa19.71■□□□□ 0.75
CIITA-206ENST00000571190 HCFC2Q9Y5Z7 792 aa19.71■□□□□ 0.75
CIITA-206ENST00000571190 FNDC1Q4ZHG4 1894 aaPredicted RBP19.71■□□□□ 0.75
CIITA-206ENST00000571190 CLASP2O75122 1294 aaKnown RBP19.7■□□□□ 0.74
CIITA-206ENST00000571190 SCRN1Q12765 414 aa19.7■□□□□ 0.74
CIITA-206ENST00000571190 PPP2R5CQ13362 524 aa19.7■□□□□ 0.74
CIITA-206ENST00000571190 SMC1AQ14683 1233 aaKnown RBP19.7■□□□□ 0.74
CIITA-206ENST00000571190 LETM2Q2VYF4 491 aa19.7■□□□□ 0.74
CIITA-206ENST00000571190 BCL7CQ8WUZ0 217 aaPredicted RBP19.7■□□□□ 0.74
CIITA-206ENST00000571190 PBXIP1Q96AQ6 731 aa19.7■□□□□ 0.74
CIITA-206ENST00000571190 ASIC4Q96FT7 647 aa19.7■□□□□ 0.74
CIITA-206ENST00000571190 MRPL9Q9BYD2 267 aaKnown RBP19.7■□□□□ 0.74
CIITA-206ENST00000571190 CYP26B1Q9NR63 512 aa19.7■□□□□ 0.74
CIITA-206ENST00000571190 PDRG1Q9NUG6 133 aa19.7■□□□□ 0.74
CIITA-206ENST00000571190 FAM105AQ9NUU6 356 aa19.7■□□□□ 0.74
CIITA-206ENST00000571190 PIN4Q9Y237 131 aaKnown RBP19.7■□□□□ 0.74
CIITA-206ENST00000571190 MUC6Q6W4X9 2439 aa19.7■□□□□ 0.74
CIITA-206ENST00000571190 LOXHD1Q8IVV2 1947 aa19.69■□□□□ 0.74
CIITA-206ENST00000571190 B4GALT3O60512 393 aa19.69■□□□□ 0.74
CIITA-206ENST00000571190 ZNF623O75123 536 aa19.69■□□□□ 0.74
CIITA-206ENST00000571190 SRGAP2BP0DMP2 458 aa19.69■□□□□ 0.74
CIITA-206ENST00000571190 SFPQP23246 707 aaKnown RBP eCLIP19.69■□□□□ 0.74
CIITA-206ENST00000571190 ALDH7A1P49419 539 aaKnown RBP19.69■□□□□ 0.74
CIITA-206ENST00000571190 MRE11P49959 708 aa19.69■□□□□ 0.74
CIITA-206ENST00000571190 EARS2Q5JPH6 523 aaKnown RBP19.69■□□□□ 0.74
CIITA-206ENST00000571190 TWF2Q6IBS0 349 aaKnown RBP19.69■□□□□ 0.74
CIITA-206ENST00000571190 PPP4R3AQ6IN85 833 aa19.69■□□□□ 0.74
CIITA-206ENST00000571190 PRSS33Q8NF86 280 aa19.69■□□□□ 0.74
CIITA-206ENST00000571190 OXER1Q8TDS5 423 aa19.69■□□□□ 0.74
CIITA-206ENST00000571190 HAS1Q92839 578 aa19.69■□□□□ 0.74
CIITA-206ENST00000571190 CASP10Q92851 521 aa19.69■□□□□ 0.74
CIITA-206ENST00000571190 FAM20AQ96MK3 541 aa19.69■□□□□ 0.74
CIITA-206ENST00000571190 NLRP4Q96MN2 994 aa19.69■□□□□ 0.74
CIITA-206ENST00000571190 ZBP1Q9H171 429 aa19.69■□□□□ 0.74
CIITA-206ENST00000571190 NRDE2Q9H7Z3 1164 aa19.69■□□□□ 0.74
CIITA-206ENST00000571190 TBC1D13Q9NVG8 400 aa19.69■□□□□ 0.74
CIITA-206ENST00000571190 OFD1O75665 1012 aa19.68■□□□□ 0.74
CIITA-206ENST00000571190 CXCL14O95715 111 aa19.68■□□□□ 0.74
CIITA-206ENST00000571190 GALTP07902 379 aa19.68■□□□□ 0.74
CIITA-206ENST00000571190 QARSP47897 775 aaKnown RBP19.68■□□□□ 0.74
CIITA-206ENST00000571190 SIGLEC14Q08ET2 396 aa19.68■□□□□ 0.74
CIITA-206ENST00000571190 CPLX2Q6PUV4 134 aaKnown RBP19.68■□□□□ 0.74
CIITA-206ENST00000571190 VPS52Q8N1B4 723 aa19.68■□□□□ 0.74
CIITA-206ENST00000571190 AUTS2Q8WXX7 1259 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms