RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 FDXACB1Q9BRP7 624 aaPredicted RBP16.62■□□□□ 0.25
NDE1-203ENST00000570727 PHF7Q9BWX1 381 aaPredicted RBP16.62■□□□□ 0.25
NDE1-203ENST00000570727 GCOM2Q9BZD3 368 aaPredicted RBP16.62■□□□□ 0.25
NDE1-203ENST00000570727 SPG21Q9NZD8 308 aa16.62■□□□□ 0.25
NDE1-203ENST00000570727 KCNJ14Q9UNX9 436 aa16.62■□□□□ 0.25
NDE1-203ENST00000570727 SLC37A4O43826 429 aa16.61■□□□□ 0.25
NDE1-203ENST00000570727 MAFO75444 373 aaPredicted RBP16.61■□□□□ 0.25
NDE1-203ENST00000570727 KRT17Q04695 432 aa16.61■□□□□ 0.25
NDE1-203ENST00000570727 INF2Q27J81 1249 aa16.61■□□□□ 0.25
NDE1-203ENST00000570727 SYCE2Q6PIF2 218 aa16.61■□□□□ 0.25
NDE1-203ENST00000570727 SLC39A11Q8N1S5 342 aa16.61■□□□□ 0.25
NDE1-203ENST00000570727 LRRC43Q8N309 656 aa16.61■□□□□ 0.25
NDE1-203ENST00000570727 HELQQ8TDG4 1101 aa16.61■□□□□ 0.25
NDE1-203ENST00000570727 SCLT1Q96NL6 688 aa16.61■□□□□ 0.25
NDE1-203ENST00000570727 PHF20Q9BVI0 1012 aa16.61■□□□□ 0.25
NDE1-203ENST00000570727 TRAIPQ9BWF2 469 aa16.61■□□□□ 0.25
NDE1-203ENST00000570727 NGRNQ9NPE2 291 aaKnown RBP16.61■□□□□ 0.25
NDE1-203ENST00000570727 CHST12Q9NRB3 414 aa16.61■□□□□ 0.25
NDE1-203ENST00000570727 PDRG1Q9NUG6 133 aa16.61■□□□□ 0.25
NDE1-203ENST00000570727 DACT1Q9NYF0 836 aa16.61■□□□□ 0.25
NDE1-203ENST00000570727 SUCLA2Q9P2R7 463 aaPredicted RBP16.61■□□□□ 0.25
NDE1-203ENST00000570727 DDX25Q9UHL0 483 aaKnown RBP16.61■□□□□ 0.25
NDE1-203ENST00000570727 PIEZO1Q92508 2521 aa16.6■□□□□ 0.25
NDE1-203ENST00000570727 FSD2A1L4K1 749 aa16.6■□□□□ 0.25
NDE1-203ENST00000570727 DTNBO60941 627 aa16.6■□□□□ 0.25
NDE1-203ENST00000570727 PPM1AP35813 382 aa16.6■□□□□ 0.25
NDE1-203ENST00000570727 TECP42680 631 aa16.6■□□□□ 0.25
NDE1-203ENST00000570727 PHKA2P46019 1235 aa16.6■□□□□ 0.25
NDE1-203ENST00000570727 DNM2P50570 870 aa16.6■□□□□ 0.25
NDE1-203ENST00000570727 PSMC5P62195 406 aa16.6■□□□□ 0.25
NDE1-203ENST00000570727 SCRN1Q12765 414 aa16.6■□□□□ 0.25
NDE1-203ENST00000570727 ANKRD54Q6NXT1 300 aa16.6■□□□□ 0.25
NDE1-203ENST00000570727 CPLX2Q6PUV4 134 aaKnown RBP16.6■□□□□ 0.25
NDE1-203ENST00000570727 KRT25Q7Z3Z0 450 aa16.6■□□□□ 0.25
NDE1-203ENST00000570727 TMC7Q7Z402 723 aa16.6■□□□□ 0.25
NDE1-203ENST00000570727 KSR1Q8IVT5 923 aa16.6■□□□□ 0.25
NDE1-203ENST00000570727 MRPL43Q8N983 215 aaKnown RBP16.6■□□□□ 0.25
NDE1-203ENST00000570727 ZNF579Q8NAF0 562 aaKnown RBP16.6■□□□□ 0.25
NDE1-203ENST00000570727 RPGRIP1Q96KN7 1286 aa16.6■□□□□ 0.25
NDE1-203ENST00000570727 KCNMB3Q9NPA1 279 aa16.6■□□□□ 0.25
NDE1-203ENST00000570727 ENTPD7Q9NQZ7 604 aa16.6■□□□□ 0.25
NDE1-203ENST00000570727 GJB4Q9NTQ9 266 aa16.6■□□□□ 0.25
NDE1-203ENST00000570727 VAV3Q9UKW4 847 aa16.6■□□□□ 0.25
NDE1-203ENST00000570727 MYO10Q9HD67 2058 aa16.59■□□□□ 0.25
NDE1-203ENST00000570727 NT5C1B-RDH14C9J2C7 533 aa16.59■□□□□ 0.25
NDE1-203ENST00000570727 NPEPPSP55786 919 aa16.59■□□□□ 0.25
NDE1-203ENST00000570727 BCAR1P56945 870 aa16.59■□□□□ 0.25
NDE1-203ENST00000570727 PPP2R5CQ13362 524 aa16.59■□□□□ 0.25
NDE1-203ENST00000570727 LETM2Q2VYF4 491 aa16.59■□□□□ 0.25
NDE1-203ENST00000570727 PLA2G4FQ68DD2 849 aa16.59■□□□□ 0.25
NDE1-203ENST00000570727 BMP8AQ7Z5Y6 402 aa16.59■□□□□ 0.25
NDE1-203ENST00000570727 ZNF410Q86VK4 478 aa16.59■□□□□ 0.25
NDE1-203ENST00000570727 RHPN2Q8IUC4 686 aa16.59■□□□□ 0.25
NDE1-203ENST00000570727 FBXL18Q96ME1 805 aa16.59■□□□□ 0.25
NDE1-203ENST00000570727 WRAP73Q9P2S5 460 aaPredicted RBP16.59■□□□□ 0.25
NDE1-203ENST00000570727 C2orf71A6NGG8 1288 aa16.58■□□□□ 0.24
NDE1-203ENST00000570727 QARSP47897 775 aaKnown RBP16.58■□□□□ 0.24
NDE1-203ENST00000570727 ZXDAP98168 799 aa16.58■□□□□ 0.24
NDE1-203ENST00000570727 PPP4R3AQ6IN85 833 aa16.58■□□□□ 0.24
NDE1-203ENST00000570727 LLGL2Q6P1M3 1020 aa16.58■□□□□ 0.24
NDE1-203ENST00000570727 TRIM67Q6ZTA4 783 aa16.58■□□□□ 0.24
NDE1-203ENST00000570727 OXER1Q8TDS5 423 aa16.58■□□□□ 0.24
NDE1-203ENST00000570727 HAS1Q92839 578 aa16.58■□□□□ 0.24
NDE1-203ENST00000570727 LPPQ93052 612 aa16.58■□□□□ 0.24
NDE1-203ENST00000570727 MFSD14AQ96MC6 490 aa16.58■□□□□ 0.24
NDE1-203ENST00000570727 FAM20AQ96MK3 541 aa16.58■□□□□ 0.24
NDE1-203ENST00000570727 APOL5Q9BWW9 433 aa16.58■□□□□ 0.24
NDE1-203ENST00000570727 INO80BQ9C086 356 aaPredicted RBP16.58■□□□□ 0.24
NDE1-203ENST00000570727 KCNH6Q9H252 994 aa16.58■□□□□ 0.24
NDE1-203ENST00000570727 IFT122Q9HBG6 1241 aa16.58■□□□□ 0.24
NDE1-203ENST00000570727 CYP26B1Q9NR63 512 aa16.58■□□□□ 0.24
NDE1-203ENST00000570727 MEIS3P2A8K0S8 358 aa16.57■□□□□ 0.24
NDE1-203ENST00000570727 ZNF623O75123 536 aa16.57■□□□□ 0.24
NDE1-203ENST00000570727 CTDNEP1O95476 244 aa16.57■□□□□ 0.24
NDE1-203ENST00000570727 P4HBP07237 508 aaKnown RBP16.57■□□□□ 0.24
NDE1-203ENST00000570727 SFPQP23246 707 aaKnown RBP eCLIP16.57■□□□□ 0.24
NDE1-203ENST00000570727 ALDH7A1P49419 539 aaKnown RBP16.57■□□□□ 0.24
NDE1-203ENST00000570727 LONRF3Q496Y0 759 aa16.57■□□□□ 0.24
NDE1-203ENST00000570727 EARS2Q5JPH6 523 aaKnown RBP16.57■□□□□ 0.24
NDE1-203ENST00000570727 TWF2Q6IBS0 349 aaKnown RBP16.57■□□□□ 0.24
NDE1-203ENST00000570727 NEK8Q86SG6 692 aa16.57■□□□□ 0.24
NDE1-203ENST00000570727 MRPL9Q9BYD2 267 aaKnown RBP16.57■□□□□ 0.24
NDE1-203ENST00000570727 SLKQ9H2G2 1235 aaPredicted RBP16.57■□□□□ 0.24
NDE1-203ENST00000570727 NRDE2Q9H7Z3 1164 aa16.57■□□□□ 0.24
NDE1-203ENST00000570727 TPCN1Q9ULQ1 816 aa16.57■□□□□ 0.24
NDE1-203ENST00000570727 STK36Q9NRP7 1315 aa16.56■□□□□ 0.24
NDE1-203ENST00000570727 CCDC194A0A1B0GVG4 234 aa16.56■□□□□ 0.24
NDE1-203ENST00000570727 TMEM221A6NGB7 291 aa16.56■□□□□ 0.24
NDE1-203ENST00000570727 M0R296 226 aa16.56■□□□□ 0.24
NDE1-203ENST00000570727 PFKFB2O60825 505 aa16.56■□□□□ 0.24
NDE1-203ENST00000570727 CLASP2O75122 1294 aaKnown RBP16.56■□□□□ 0.24
NDE1-203ENST00000570727 OFD1O75665 1012 aa16.56■□□□□ 0.24
NDE1-203ENST00000570727 CXCL14O95715 111 aa16.56■□□□□ 0.24
NDE1-203ENST00000570727 SRGAP2BP0DMP2 458 aa16.56■□□□□ 0.24
NDE1-203ENST00000570727 HOXB8P17481 243 aaPredicted RBP16.56■□□□□ 0.24
NDE1-203ENST00000570727 NHLH1Q02575 133 aa16.56■□□□□ 0.24
NDE1-203ENST00000570727 SMC1AQ14683 1233 aaKnown RBP16.56■□□□□ 0.24
NDE1-203ENST00000570727 ALYREFQ86V81 257 aaKnown RBP16.56■□□□□ 0.24
NDE1-203ENST00000570727 TMEM173Q86WV6 379 aaPredicted RBP16.56■□□□□ 0.24
NDE1-203ENST00000570727 NLRP4Q96MN2 994 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms