RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 KCNJ14Q9UNX9 436 aa9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 A0A0U1RQF3 1178 aa9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 MEIS3P2A8K0S8 358 aa9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 EML1O00423 815 aa9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 SLC37A4O43826 429 aa9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 STBD1O95210 358 aa9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 MRE11P49959 708 aa9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 EVCP57679 992 aa9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 ZXDAP98168 799 aa9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 CBX2Q14781 532 aaPredicted RBP9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 LETM2Q2VYF4 491 aa9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 Q4G0T1 1027 aa9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 XKR3Q5GH77 459 aa9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 TWF2Q6IBS0 349 aaKnown RBP9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 PDE12Q6L8Q7 609 aaKnown RBP9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 KANK3Q6NY19 840 aa9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 ZNF598Q86UK7 904 aaKnown RBP9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 TMEM173Q86WV6 379 aaPredicted RBP9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 RHPN2Q8IUC4 686 aa9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 SLC39A11Q8N1S5 342 aa9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 AUTS2Q8WXX7 1259 aa9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 SUSD6Q92537 303 aa9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 NLRP4Q96MN2 994 aa9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 PHOX2BQ99453 314 aa9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 CDCA3Q99618 268 aaPredicted RBP9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 GCOM2Q9BZD3 368 aaPredicted RBP9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 GBP3Q9H0R5 595 aa9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 SLKQ9H2G2 1235 aaPredicted RBP9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 GJB4Q9NTQ9 266 aa9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 SUCLA2Q9P2R7 463 aaPredicted RBP9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 DDX25Q9UHL0 483 aaKnown RBP9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 LZTS1Q9Y250 596 aa9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 INPP5FQ9Y2H2 1132 aa9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 CYP46A1Q9Y6A2 500 aa9.68□□□□□ -0.86
CTDNEP1-203ENST00000570385 C2orf71A6NGG8 1288 aa9.67□□□□□ -0.86
CTDNEP1-203ENST00000570385 ZC3H11AO75152 810 aaKnown RBP eCLIP9.67□□□□□ -0.86
CTDNEP1-203ENST00000570385 DEXIO95424 95 aa9.67□□□□□ -0.86
CTDNEP1-203ENST00000570385 CXCL14O95715 111 aa9.67□□□□□ -0.86
CTDNEP1-203ENST00000570385 PPM1AP35813 382 aa9.67□□□□□ -0.86
CTDNEP1-203ENST00000570385 PHKA2P46019 1235 aa9.67□□□□□ -0.86
CTDNEP1-203ENST00000570385 ALDH7A1P49419 539 aaKnown RBP9.67□□□□□ -0.86
CTDNEP1-203ENST00000570385 NPEPPSP55786 919 aa9.67□□□□□ -0.86
CTDNEP1-203ENST00000570385 BCAR1P56945 870 aa9.67□□□□□ -0.86
CTDNEP1-203ENST00000570385 KCNC3Q14003 757 aa9.67□□□□□ -0.86
CTDNEP1-203ENST00000570385 NONOQ15233 471 aaKnown RBP eCLIP9.67□□□□□ -0.86
CTDNEP1-203ENST00000570385 NPY5RQ15761 445 aa9.67□□□□□ -0.86
CTDNEP1-203ENST00000570385 TMEM184AQ6ZMB5 413 aa9.67□□□□□ -0.86
CTDNEP1-203ENST00000570385 ANO5Q75V66 913 aa9.67□□□□□ -0.86
CTDNEP1-203ENST00000570385 ZBTB33Q86T24 672 aa9.67□□□□□ -0.86
CTDNEP1-203ENST00000570385 C12orf76Q8N812 135 aaPredicted RBP9.67□□□□□ -0.86
CTDNEP1-203ENST00000570385 MRPL43Q8N983 215 aaKnown RBP9.67□□□□□ -0.86
CTDNEP1-203ENST00000570385 ZNF579Q8NAF0 562 aaKnown RBP9.67□□□□□ -0.86
CTDNEP1-203ENST00000570385 ETNPPLQ8TBG4 499 aa9.67□□□□□ -0.86
CTDNEP1-203ENST00000570385 FEZF2Q8TBJ5 459 aa9.67□□□□□ -0.86
CTDNEP1-203ENST00000570385 CEP89Q96ST8 783 aa9.67□□□□□ -0.86
CTDNEP1-203ENST00000570385 NIFKQ9BYG3 293 aaKnown RBP9.67□□□□□ -0.86
CTDNEP1-203ENST00000570385 NGRNQ9NPE2 291 aaKnown RBP9.67□□□□□ -0.86
CTDNEP1-203ENST00000570385 DACT1Q9NYF0 836 aa9.67□□□□□ -0.86
CTDNEP1-203ENST00000570385 PIN4Q9Y237 131 aaKnown RBP9.67□□□□□ -0.86
CTDNEP1-203ENST00000570385 HCFC2Q9Y5Z7 792 aa9.67□□□□□ -0.86
CTDNEP1-203ENST00000570385 TRIOO75962 3097 aa9.67□□□□□ -0.86
CTDNEP1-203ENST00000570385 CYP3A7-CYP3A51PA0A087WV96 503 aa9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 IGKV6-21A0A0C4DH24 114 aa9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 M0R2N6 131 aa9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 CLASP2O75122 1294 aaKnown RBP9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 EOMESO95936 686 aa9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 SRGAP2BP0DMP2 458 aa9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 SFPQP23246 707 aaKnown RBP eCLIP9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 CYP3A7P24462 503 aa9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 DNM2P50570 870 aa9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 PSMC5P62195 406 aa9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 SMC1AQ14683 1233 aaKnown RBP9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 RARS2Q5T160 578 aaKnown RBP9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 B3GNT9Q6UX72 402 aa9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 FAM43BQ6ZT52 329 aaPredicted RBP9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 CATSPER4Q7RTX7 472 aa9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 SUGP1Q8IWZ8 645 aaKnown RBP9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 VPS52Q8N1B4 723 aa9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 ZNF710Q8N1W2 664 aa9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 TMEM87AQ8NBN3 555 aa9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 PRSS33Q8NF86 280 aa9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 RDM1Q8NG50 284 aa9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 BCL7CQ8WUZ0 217 aaPredicted RBP9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 TMEM143Q96AN5 459 aa9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 ZNF274Q96GC6 653 aaPredicted RBP9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 TMEM169Q96HH4 297 aa9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 C22orf23Q9BZE7 217 aa9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 SMOC2Q9H3U7 446 aa9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 PDRG1Q9NUG6 133 aa9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 WRAP73Q9P2S5 460 aaPredicted RBP9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 PTPRZ1P23471 2315 aaPredicted RBP9.66□□□□□ -0.86
CTDNEP1-203ENST00000570385 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 CCDC194A0A1B0GVG4 234 aa9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 ZBTB39O15060 712 aa9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 MARCH6O60337 910 aa9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 B4GALT3O60512 393 aa9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 CCNT1O60563 726 aaKnown RBP9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 MAFO75444 373 aaPredicted RBP9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 PDGFBP01127 241 aaPredicted RBP9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 SSBP05455 408 aaKnown RBP eCLIP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms