RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 PLA2G4FQ68DD2 849 aa25.23■■□□□ 1.63
RBFOX1-219ENST00000569895 C4orf19Q8IY42 314 aa25.23■■□□□ 1.63
RBFOX1-219ENST00000569895 DTNBO60941 627 aa25.22■■□□□ 1.63
RBFOX1-219ENST00000569895 CSDE1O75534 798 aaKnown RBP25.22■■□□□ 1.63
RBFOX1-219ENST00000569895 RFC5P40937 340 aa25.22■■□□□ 1.63
RBFOX1-219ENST00000569895 POLGP54098 1239 aaPredicted RBP25.22■■□□□ 1.63
RBFOX1-219ENST00000569895 PLCB3Q01970 1234 aa25.22■■□□□ 1.63
RBFOX1-219ENST00000569895 DLX2Q07687 328 aaPredicted RBP25.22■■□□□ 1.63
RBFOX1-219ENST00000569895 SMAD4Q13485 552 aaKnown RBP25.22■■□□□ 1.63
RBFOX1-219ENST00000569895 SMAD2Q15796 467 aaKnown RBP25.22■■□□□ 1.63
RBFOX1-219ENST00000569895 CLUL1Q15846 466 aa25.22■■□□□ 1.63
RBFOX1-219ENST00000569895 TMEM31Q5JXX7 168 aa25.22■■□□□ 1.63
RBFOX1-219ENST00000569895 NCAPH2Q6IBW4 605 aa25.22■■□□□ 1.63
RBFOX1-219ENST00000569895 ADGRD2Q7Z7M1 963 aa25.22■■□□□ 1.63
RBFOX1-219ENST00000569895 RBM23Q86U06 439 aaKnown RBP25.22■■□□□ 1.63
RBFOX1-219ENST00000569895 POTEDQ86YR6 584 aa25.22■■□□□ 1.63
RBFOX1-219ENST00000569895 ADHFE1Q8IWW8 467 aa25.22■■□□□ 1.63
RBFOX1-219ENST00000569895 NSUN7Q8NE18 718 aaKnown RBP25.22■■□□□ 1.63
RBFOX1-219ENST00000569895 NLRP4Q96MN2 994 aa25.22■■□□□ 1.63
RBFOX1-219ENST00000569895 ZNF558Q96NG5 402 aa25.22■■□□□ 1.63
RBFOX1-219ENST00000569895 POP1Q99575 1024 aaKnown RBP25.22■■□□□ 1.63
RBFOX1-219ENST00000569895 CDCA3Q99618 268 aaPredicted RBP25.22■■□□□ 1.63
RBFOX1-219ENST00000569895 MRPL9Q9BYD2 267 aaKnown RBP25.22■■□□□ 1.63
RBFOX1-219ENST00000569895 ZSWIM4Q9H7M6 989 aa25.22■■□□□ 1.63
RBFOX1-219ENST00000569895 LINC01565O15544 149 aa25.21■■□□□ 1.63
RBFOX1-219ENST00000569895 MBTPS2O43462 519 aa25.21■■□□□ 1.63
RBFOX1-219ENST00000569895 GAS2O43903 313 aaKnown RBP25.21■■□□□ 1.63
RBFOX1-219ENST00000569895 ALADP13716 330 aa25.21■■□□□ 1.63
RBFOX1-219ENST00000569895 NPEPPSP55786 919 aa25.21■■□□□ 1.63
RBFOX1-219ENST00000569895 EARS2Q5JPH6 523 aaKnown RBP25.21■■□□□ 1.63
RBFOX1-219ENST00000569895 TWF2Q6IBS0 349 aaKnown RBP25.21■■□□□ 1.63
RBFOX1-219ENST00000569895 KCNT2Q6UVM3 1135 aa25.21■■□□□ 1.63
RBFOX1-219ENST00000569895 MRPS27Q92552 414 aaKnown RBP25.21■■□□□ 1.63
RBFOX1-219ENST00000569895 LXNQ9BS40 222 aa25.21■■□□□ 1.63
RBFOX1-219ENST00000569895 TRAIPQ9BWF2 469 aa25.21■■□□□ 1.63
RBFOX1-219ENST00000569895 RNF19AQ9NV58 838 aa25.21■■□□□ 1.63
RBFOX1-219ENST00000569895 PCDHA12Q9UN75 941 aa25.21■■□□□ 1.63
RBFOX1-219ENST00000569895 BDP1A6H8Y1 2624 aa25.21■■□□□ 1.63
RBFOX1-219ENST00000569895 WDR81Q562E7 1941 aa25.2■■□□□ 1.62
RBFOX1-219ENST00000569895 TBX10O75333 385 aa25.2■■□□□ 1.62
RBFOX1-219ENST00000569895 LARGE1O95461 756 aa25.2■■□□□ 1.62
RBFOX1-219ENST00000569895 CENPBP07199 599 aaPredicted RBP25.2■■□□□ 1.62
RBFOX1-219ENST00000569895 YWHABP31946 246 aaKnown RBP25.2■■□□□ 1.62
RBFOX1-219ENST00000569895 LRRC55Q6ZSA7 311 aa25.2■■□□□ 1.62
RBFOX1-219ENST00000569895 CATSPER4Q7RTX7 472 aa25.2■■□□□ 1.62
RBFOX1-219ENST00000569895 ZNF598Q86UK7 904 aaKnown RBP25.2■■□□□ 1.62
RBFOX1-219ENST00000569895 TCP11Q8WWU5 503 aa25.2■■□□□ 1.62
RBFOX1-219ENST00000569895 PSPC1Q8WXF1 523 aaKnown RBP25.2■■□□□ 1.62
RBFOX1-219ENST00000569895 TNFRSF25Q93038 417 aa25.2■■□□□ 1.62
RBFOX1-219ENST00000569895 DHX33Q9H6R0 707 aaKnown RBP25.2■■□□□ 1.62
RBFOX1-219ENST00000569895 SPG21Q9NZD8 308 aa25.2■■□□□ 1.62
RBFOX1-219ENST00000569895 HCSTQ9UBK5 93 aa25.2■■□□□ 1.62
RBFOX1-219ENST00000569895 PIN4Q9Y237 131 aaKnown RBP25.2■■□□□ 1.62
RBFOX1-219ENST00000569895 COL4A3BPQ9Y5P4 624 aa25.2■■□□□ 1.62
RBFOX1-219ENST00000569895 CARNS1A5YM72 827 aa25.19■■□□□ 1.62
RBFOX1-219ENST00000569895 ASAP2O43150 1006 aa25.19■■□□□ 1.62
RBFOX1-219ENST00000569895 GPR37L1O60883 481 aa25.19■■□□□ 1.62
RBFOX1-219ENST00000569895 PHKA2P46019 1235 aa25.19■■□□□ 1.62
RBFOX1-219ENST00000569895 ZP2Q05996 745 aa25.19■■□□□ 1.62
RBFOX1-219ENST00000569895 CALCRLQ16602 461 aa25.19■■□□□ 1.62
RBFOX1-219ENST00000569895 CLLU1OSQ5K130 101 aa25.19■■□□□ 1.62
RBFOX1-219ENST00000569895 HELQQ8TDG4 1101 aa25.19■■□□□ 1.62
RBFOX1-219ENST00000569895 KHSRPQ92945 711 aaKnown RBP eCLIP25.19■■□□□ 1.62
RBFOX1-219ENST00000569895 DYDC2Q96IM9 177 aa25.19■■□□□ 1.62
RBFOX1-219ENST00000569895 NGRNQ9NPE2 291 aaKnown RBP25.19■■□□□ 1.62
RBFOX1-219ENST00000569895 RGL1Q9NZL6 768 aa25.19■■□□□ 1.62
RBFOX1-219ENST00000569895 MYO7AQ13402 2215 aa25.18■■□□□ 1.62
RBFOX1-219ENST00000569895 FNDC1Q4ZHG4 1894 aaPredicted RBP25.18■■□□□ 1.62
RBFOX1-219ENST00000569895 BTBD18B2RXH4 712 aa25.18■■□□□ 1.62
RBFOX1-219ENST00000569895 EYA4O95677 639 aa25.18■■□□□ 1.62
RBFOX1-219ENST00000569895 SRGAP2BP0DMP2 458 aa25.18■■□□□ 1.62
RBFOX1-219ENST00000569895 ALDH7A1P49419 539 aaKnown RBP25.18■■□□□ 1.62
RBFOX1-219ENST00000569895 RAB27AP51159 221 aa25.18■■□□□ 1.62
RBFOX1-219ENST00000569895 ERVFC1P60507 584 aa25.18■■□□□ 1.62
RBFOX1-219ENST00000569895 BMS1Q14692 1282 aaKnown RBP25.18■■□□□ 1.62
RBFOX1-219ENST00000569895 SAFBQ15424 915 aaKnown RBP eCLIP25.18■■□□□ 1.62
RBFOX1-219ENST00000569895 XKR9Q5GH70 373 aa25.18■■□□□ 1.62
RBFOX1-219ENST00000569895 SRGAP1Q7Z6B7 1085 aa25.18■■□□□ 1.62
RBFOX1-219ENST00000569895 KSR1Q8IVT5 923 aa25.18■■□□□ 1.62
RBFOX1-219ENST00000569895 TPH2Q8IWU9 490 aa25.18■■□□□ 1.62
RBFOX1-219ENST00000569895 DIS3L2Q8IYB7 885 aaKnown RBP25.18■■□□□ 1.62
RBFOX1-219ENST00000569895 PRPF31Q8WWY3 499 aaKnown RBP25.18■■□□□ 1.62
RBFOX1-219ENST00000569895 MSLNLQ96KJ4 702 aa25.18■■□□□ 1.62
RBFOX1-219ENST00000569895 LRFN3Q9BTN0 628 aa25.18■■□□□ 1.62
RBFOX1-219ENST00000569895 WRAP73Q9P2S5 460 aaPredicted RBP25.18■■□□□ 1.62
RBFOX1-219ENST00000569895 FAM205CA6NFA0 338 aa25.17■■□□□ 1.62
RBFOX1-219ENST00000569895 C19orf67A6NJJ6 358 aa25.17■■□□□ 1.62
RBFOX1-219ENST00000569895 FSCN2O14926 492 aa25.17■■□□□ 1.62
RBFOX1-219ENST00000569895 JAK2O60674 1132 aa25.17■■□□□ 1.62
RBFOX1-219ENST00000569895 SPIRE1Q08AE8 756 aa25.17■■□□□ 1.62
RBFOX1-219ENST00000569895 COASYQ13057 564 aa25.17■■□□□ 1.62
RBFOX1-219ENST00000569895 CTTNQ14247 550 aaKnown RBP25.17■■□□□ 1.62
RBFOX1-219ENST00000569895 TMEM143Q96AN5 459 aa25.17■■□□□ 1.62
RBFOX1-219ENST00000569895 IFT122Q9HBG6 1241 aa25.17■■□□□ 1.62
RBFOX1-219ENST00000569895 ENTPD7Q9NQZ7 604 aa25.17■■□□□ 1.62
RBFOX1-219ENST00000569895 LIMCH1Q9UPQ0 1083 aa25.17■■□□□ 1.62
RBFOX1-219ENST00000569895 PCDHGC5Q9Y5F6 944 aa25.17■■□□□ 1.62
RBFOX1-219ENST00000569895 PER2O15055 1255 aa25.16■■□□□ 1.62
RBFOX1-219ENST00000569895 NEMFO60524 1076 aa25.16■■□□□ 1.62
RBFOX1-219ENST00000569895 ZNF623O75123 536 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms