RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 ATP8B4Q8TF62 1192 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 BORCS6Q96GS4 357 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 FAM207AQ9NSI2 230 aaPredicted RBP11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 USP20Q9Y2K6 914 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 EVPLQ92817 2033 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 HTTP42858 3142 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 ANKRD63C9JTQ0 380 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 SLC16A3O15427 465 aaKnown RBP11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 LGALS2P05162 132 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 EPB41P11171 864 aaKnown RBP11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 TRIM21P19474 475 aaKnown RBP11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 CYP2B6P20813 491 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 CYP2C19P33261 490 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 SMTNP53814 917 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 KCNMA1Q12791 1236 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 LAMC2Q13753 1193 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 MTF1Q14872 753 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 DCAF17Q5H9S7 520 aaPredicted RBP11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 FRMD5Q7Z6J6 570 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 BBXQ8WY36 941 aaPredicted RBP11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 PANX2Q96RD6 677 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 NTPCRQ9BSD7 190 aaKnown RBP11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 CRACR2AQ9BSW2 395 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 ARHGAP39Q9C0H5 1083 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 ABHD16BQ9H3Z7 469 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 RNPEPQ9H4A4 650 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 ABHD10Q9NUJ1 306 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 TRMT1Q9NXH9 659 aaKnown RBP11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 KRT9P35527 623 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 ARL2P36404 184 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 RTP1P59025 263 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 KCNH2Q12809 1159 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 TRIM14Q14142 442 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 CNGA4Q8IV77 575 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 MAP4K3Q8IVH8 894 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 FAM186BQ8IYM0 893 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 CCDC112Q8NEF3 446 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 FAM167AQ96KS9 214 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 TMEM206Q9H813 350 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 C17orf75Q9HAS0 396 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 SOWAHDA6NJG2 315 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 MAFO75444 373 aaPredicted RBP11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 TOMM70O94826 608 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 MKRN4PQ13434 485 aaPredicted RBP11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 DUSP28Q4G0W2 176 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 SLC39A4Q6P5W5 647 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 LRRC71Q8N4P6 559 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 RDH13Q8NBN7 331 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 PPTC7Q8NI37 304 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 SLC35C1Q96A29 364 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 HHIPL1Q96JK4 782 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 SMARCAD1Q9H4L7 1026 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 ARHGAP28Q9P2N2 729 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 GJD2Q9UKL4 321 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 TRPC6Q9Y210 931 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 ADSSP30520 456 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 RFC5P40937 340 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 EMID1Q96A84 441 aaPredicted RBP11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 IFT74Q96LB3 600 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 MMRN2Q9H8L6 949 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 CAPN11Q9UMQ6 739 aa11.98□□□□□ -0.49
PDXDC1-216ENST00000569715 TNPO2O14787 897 aaKnown RBP11.97□□□□□ -0.49
PDXDC1-216ENST00000569715 CA12O43570 354 aa11.97□□□□□ -0.49
PDXDC1-216ENST00000569715 TPM1P09493 284 aa11.97□□□□□ -0.49
PDXDC1-216ENST00000569715 HOXC6P09630 235 aa11.97□□□□□ -0.49
PDXDC1-216ENST00000569715 XRCC5P13010 732 aaKnown RBP11.97□□□□□ -0.49
PDXDC1-216ENST00000569715 PSMC2P35998 433 aaKnown RBP11.97□□□□□ -0.49
PDXDC1-216ENST00000569715 IRX5P78411 483 aaPredicted RBP11.97□□□□□ -0.49
PDXDC1-216ENST00000569715 TCERG1LQ5VWI1 586 aa11.97□□□□□ -0.49
PDXDC1-216ENST00000569715 GPIHBP1Q8IV16 184 aa11.97□□□□□ -0.49
PDXDC1-216ENST00000569715 GOLGA5Q8TBA6 731 aa11.97□□□□□ -0.49
PDXDC1-216ENST00000569715 SLC5A4Q9NY91 659 aa11.97□□□□□ -0.49
PDXDC1-216ENST00000569715 LRRIQ4A6NIV6 560 aa11.97□□□□□ -0.49
PDXDC1-216ENST00000569715 EXOC3O60645 756 aa11.97□□□□□ -0.49
PDXDC1-216ENST00000569715 CAPSQ13938 189 aa11.97□□□□□ -0.49
PDXDC1-216ENST00000569715 TOGARAM2Q6ZUX3 1019 aa11.97□□□□□ -0.49
PDXDC1-216ENST00000569715 SLC9A9Q8IVB4 645 aa11.97□□□□□ -0.49
PDXDC1-216ENST00000569715 CCAR2Q8N163 923 aaKnown RBP11.97□□□□□ -0.49
PDXDC1-216ENST00000569715 SUGCTQ9HAC7 445 aa11.97□□□□□ -0.49
PDXDC1-216ENST00000569715 HSPBP1Q9NZL4 362 aa11.97□□□□□ -0.49
PDXDC1-216ENST00000569715 STX10O60499 249 aa11.97□□□□□ -0.49
PDXDC1-216ENST00000569715 EDN1P05305 212 aa11.97□□□□□ -0.49
PDXDC1-216ENST00000569715 TRIM49P0CI25 452 aa11.97□□□□□ -0.49
PDXDC1-216ENST00000569715 TRIM49CP0CI26 452 aa11.97□□□□□ -0.49
PDXDC1-216ENST00000569715 CAP1Q01518 475 aa11.97□□□□□ -0.49
PDXDC1-216ENST00000569715 RAD9BQ6WBX8 426 aa11.97□□□□□ -0.49
PDXDC1-216ENST00000569715 SLC17A8Q8NDX2 589 aa11.97□□□□□ -0.49
PDXDC1-216ENST00000569715 OR6J1Q8NGC5 347 aa11.97□□□□□ -0.49
PDXDC1-216ENST00000569715 FAM184BQ9ULE4 1060 aa11.97□□□□□ -0.49
PDXDC1-216ENST00000569715 LUC7L2Q9Y383 392 aaKnown RBP11.97□□□□□ -0.49
PDXDC1-216ENST00000569715 GOLGA8IPA6NC78 632 aa11.96□□□□□ -0.49
PDXDC1-216ENST00000569715 GOLGA8JA6NMD2 632 aa11.96□□□□□ -0.49
PDXDC1-216ENST00000569715 GJB1P08034 283 aa11.96□□□□□ -0.49
PDXDC1-216ENST00000569715 OLFML2BQ68BL8 750 aa11.96□□□□□ -0.49
PDXDC1-216ENST00000569715 DNAJC7Q99615 494 aa11.96□□□□□ -0.49
PDXDC1-216ENST00000569715 C16orf70Q9BSU1 422 aa11.96□□□□□ -0.49
PDXDC1-216ENST00000569715 DESI2Q9BSY9 194 aa11.96□□□□□ -0.49
PDXDC1-216ENST00000569715 MKNK1Q9BUB5 465 aa11.96□□□□□ -0.49
PDXDC1-216ENST00000569715 ERAP1Q9NZ08 941 aa11.96□□□□□ -0.49
PDXDC1-216ENST00000569715 ARHGAP6O43182 974 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms