RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 MAGEB6Q8N7X4 407 aa9.4□□□□□ -0.9
CDH11-216ENST00000569128 WDR66Q8TBY9 1149 aa9.4□□□□□ -0.9
CDH11-216ENST00000569128 OSBP2Q969R2 916 aa9.4□□□□□ -0.9
CDH11-216ENST00000569128 TCTN2Q96GX1 697 aa9.4□□□□□ -0.9
CDH11-216ENST00000569128 SEMA3GQ9NS98 782 aa9.4□□□□□ -0.9
CDH11-216ENST00000569128 RAI14Q9P0K7 980 aa9.4□□□□□ -0.9
CDH11-216ENST00000569128 AK9Q5TCS8 1911 aa9.4□□□□□ -0.9
CDH11-216ENST00000569128 MYH13Q9UKX3 1938 aa9.4□□□□□ -0.9
CDH11-216ENST00000569128 CCDC88AQ3V6T2 1871 aa9.4□□□□□ -0.91
CDH11-216ENST00000569128 PDS5AQ29RF7 1337 aaKnown RBP9.39□□□□□ -0.91
CDH11-216ENST00000569128 ZNF532Q9HCE3 1301 aa9.39□□□□□ -0.91
CDH11-216ENST00000569128 M0R2C6 588 aa9.39□□□□□ -0.91
CDH11-216ENST00000569128 GRIA2P42262 883 aa9.39□□□□□ -0.91
CDH11-216ENST00000569128 MECOMQ03112 1051 aa9.39□□□□□ -0.91
CDH11-216ENST00000569128 ZMYM1Q5SVZ6 1142 aa9.39□□□□□ -0.91
CDH11-216ENST00000569128 YOD1Q5VVQ6 348 aaPredicted RBP9.39□□□□□ -0.91
CDH11-216ENST00000569128 CWF19L1Q69YN2 538 aaKnown RBP9.39□□□□□ -0.91
CDH11-216ENST00000569128 ADGRA1Q86SQ6 560 aa9.39□□□□□ -0.91
CDH11-216ENST00000569128 CRACR2BQ8N4Y2 399 aaPredicted RBP9.39□□□□□ -0.91
CDH11-216ENST00000569128 ZNF655Q8N720 491 aaPredicted RBP9.39□□□□□ -0.91
CDH11-216ENST00000569128 BTN2A2Q8WVV5 523 aa9.39□□□□□ -0.91
CDH11-216ENST00000569128 NSUN4Q96CB9 384 aaKnown RBP9.39□□□□□ -0.91
CDH11-216ENST00000569128 RPS6KC1Q96S38 1066 aa9.39□□□□□ -0.91
CDH11-216ENST00000569128 AARSD1Q9BTE6 412 aaKnown RBP9.39□□□□□ -0.91
CDH11-216ENST00000569128 PUS7LQ9H0K6 701 aaKnown RBP9.39□□□□□ -0.91
CDH11-216ENST00000569128 VPS33BQ9H267 617 aa9.39□□□□□ -0.91
CDH11-216ENST00000569128 NCOA5Q9HCD5 579 aaKnown RBP9.39□□□□□ -0.91
CDH11-216ENST00000569128 ZNF646O15015 1829 aaPredicted RBP9.38□□□□□ -0.91
CDH11-216ENST00000569128 SALL1Q9NSC2 1324 aa9.38□□□□□ -0.91
CDH11-216ENST00000569128 SHTN1A0MZ66 631 aa9.38□□□□□ -0.91
CDH11-216ENST00000569128 GSG1L2A8MUP6 293 aa9.38□□□□□ -0.91
CDH11-216ENST00000569128 PLD2O14939 933 aa9.38□□□□□ -0.91
CDH11-216ENST00000569128 GSNP06396 782 aa9.38□□□□□ -0.91
CDH11-216ENST00000569128 GNALP38405 381 aa9.38□□□□□ -0.91
CDH11-216ENST00000569128 DYNLL1P63167 89 aaKnown RBP9.38□□□□□ -0.91
CDH11-216ENST00000569128 MAP3K12Q12852 859 aa9.38□□□□□ -0.91
CDH11-216ENST00000569128 PPP2R5AQ15172 486 aa9.38□□□□□ -0.91
CDH11-216ENST00000569128 DPY19L1Q2PZI1 675 aa9.38□□□□□ -0.91
CDH11-216ENST00000569128 FNDC3BQ53EP0 1204 aaKnown RBP9.38□□□□□ -0.91
CDH11-216ENST00000569128 STRIP1Q5VSL9 837 aa9.38□□□□□ -0.91
CDH11-216ENST00000569128 FOXB2Q5VYV0 432 aa9.38□□□□□ -0.91
CDH11-216ENST00000569128 GTF2IRD2BQ6EKJ0 949 aa9.38□□□□□ -0.91
CDH11-216ENST00000569128 GTF2IRD2Q86UP8 949 aa9.38□□□□□ -0.91
CDH11-216ENST00000569128 ZNF589Q86UQ0 364 aaPredicted RBP9.38□□□□□ -0.91
CDH11-216ENST00000569128 AFAP1L2Q8N4X5 818 aa9.38□□□□□ -0.91
CDH11-216ENST00000569128 MIGA1Q8NAN2 632 aa9.38□□□□□ -0.91
CDH11-216ENST00000569128 DIAPH3Q9NSV4 1193 aa9.38□□□□□ -0.91
CDH11-216ENST00000569128 GPR55Q9Y2T6 319 aaPredicted RBP9.38□□□□□ -0.91
CDH11-216ENST00000569128 PCDHAC2Q9Y5I4 1007 aa9.38□□□□□ -0.91
CDH11-216ENST00000569128 SNX11Q9Y5W9 270 aa9.38□□□□□ -0.91
CDH11-216ENST00000569128 SBF1O95248 1867 aa9.38□□□□□ -0.91
CDH11-216ENST00000569128 DOCK2Q92608 1830 aa9.38□□□□□ -0.91
CDH11-216ENST00000569128 MAST3O60307 1309 aa9.37□□□□□ -0.91
CDH11-216ENST00000569128 PITPNM2Q9BZ72 1349 aa9.37□□□□□ -0.91
CDH11-216ENST00000569128 ZNF541Q9H0D2 1346 aa9.37□□□□□ -0.91
CDH11-216ENST00000569128 TRAV20A0A0B4J274 112 aa9.37□□□□□ -0.91
CDH11-216ENST00000569128 FZD9O00144 591 aa9.37□□□□□ -0.91
CDH11-216ENST00000569128 SGSM2O43147 1006 aa9.37□□□□□ -0.91
CDH11-216ENST00000569128 AMPD2Q01433 879 aa9.37□□□□□ -0.91
CDH11-216ENST00000569128 PTH1RQ03431 593 aa9.37□□□□□ -0.91
CDH11-216ENST00000569128 GRB10Q13322 594 aa9.37□□□□□ -0.91
CDH11-216ENST00000569128 CBX2Q14781 532 aaPredicted RBP9.37□□□□□ -0.91
CDH11-216ENST00000569128 SPTY2D1Q68D10 685 aaPredicted RBP9.37□□□□□ -0.91
CDH11-216ENST00000569128 CIAPIN1Q6FI81 312 aa9.37□□□□□ -0.91
CDH11-216ENST00000569128 NAA16Q6N069 864 aaPredicted RBP9.37□□□□□ -0.91
CDH11-216ENST00000569128 THAP5Q7Z6K1 395 aa9.37□□□□□ -0.91
CDH11-216ENST00000569128 TBC1D22AQ8WUA7 517 aa9.37□□□□□ -0.91
CDH11-216ENST00000569128 KISS1RQ969F8 398 aaPredicted RBP9.37□□□□□ -0.91
CDH11-216ENST00000569128 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.37□□□□□ -0.91
CDH11-216ENST00000569128 ATP13A1Q9HD20 1204 aa9.37□□□□□ -0.91
CDH11-216ENST00000569128 RNF181Q9P0P0 153 aa9.37□□□□□ -0.91
CDH11-216ENST00000569128 HIP1O00291 1037 aa9.36□□□□□ -0.91
CDH11-216ENST00000569128 CAPNS1P04632 268 aa9.36□□□□□ -0.91
CDH11-216ENST00000569128 CD3EP07766 207 aa9.36□□□□□ -0.91
CDH11-216ENST00000569128 POU4F1Q01851 419 aa9.36□□□□□ -0.91
CDH11-216ENST00000569128 UBE3CQ15386 1083 aa9.36□□□□□ -0.91
CDH11-216ENST00000569128 SF1Q15637 639 aaKnown RBP9.36□□□□□ -0.91
CDH11-216ENST00000569128 MSMPQ1L6U9 139 aa9.36□□□□□ -0.91
CDH11-216ENST00000569128 GAB4Q2WGN9 574 aa9.36□□□□□ -0.91
CDH11-216ENST00000569128 MCMDC2Q4G0Z9 681 aa9.36□□□□□ -0.91
CDH11-216ENST00000569128 VPS53Q5VIR6 699 aa9.36□□□□□ -0.91
CDH11-216ENST00000569128 ZSCAN25Q6NSZ9 544 aa9.36□□□□□ -0.91
CDH11-216ENST00000569128 TMED8Q6PL24 325 aaPredicted RBP9.36□□□□□ -0.91
CDH11-216ENST00000569128 DZIP1Q86YF9 867 aaKnown RBP9.36□□□□□ -0.91
CDH11-216ENST00000569128 ZGPATQ8N5A5 531 aaKnown RBP9.36□□□□□ -0.91
CDH11-216ENST00000569128 UBR7Q8N806 425 aa9.36□□□□□ -0.91
CDH11-216ENST00000569128 ATL2Q8NHH9 583 aa9.36□□□□□ -0.91
CDH11-216ENST00000569128 HRASLS5Q96KN8 279 aa9.36□□□□□ -0.91
CDH11-216ENST00000569128 CDC6Q99741 560 aa9.36□□□□□ -0.91
CDH11-216ENST00000569128 ARMT1Q9H993 441 aa9.36□□□□□ -0.91
CDH11-216ENST00000569128 DUSP13Q9UII6 198 aa9.36□□□□□ -0.91
CDH11-216ENST00000569128 MYH7P12883 1935 aa9.36□□□□□ -0.91
CDH11-216ENST00000569128 RFX7Q2KHR2 1363 aa9.36□□□□□ -0.91
CDH11-216ENST00000569128 GOLGB1Q14789 3259 aaKnown RBP9.36□□□□□ -0.91
CDH11-216ENST00000569128 ADAMTSL1Q8N6G6 1762 aa9.35□□□□□ -0.91
CDH11-216ENST00000569128 DNAJC25-GNG10A0A024R161 153 aa9.35□□□□□ -0.91
CDH11-216ENST00000569128 FOXP2O15409 715 aa9.35□□□□□ -0.91
CDH11-216ENST00000569128 PRODHO43272 600 aa9.35□□□□□ -0.91
CDH11-216ENST00000569128 PRKAB2O43741 272 aa9.35□□□□□ -0.91
CDH11-216ENST00000569128 CAND2O75155 1236 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms