RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 SIAH1Q8IUQ4 282 aa6.77□□□□□ -1.33
CDH13-211ENST00000568770 FAM126BQ8IXS8 530 aa6.77□□□□□ -1.33
CDH13-211ENST00000568770 SMYD4Q8IYR2 804 aaPredicted RBP6.77□□□□□ -1.33
CDH13-211ENST00000568770 HERVK_113Q902F9 699 aa6.77□□□□□ -1.33
CDH13-211ENST00000568770 NKD1Q969G9 470 aa6.77□□□□□ -1.33
CDH13-211ENST00000568770 IL23AQ9NPF7 189 aa6.77□□□□□ -1.33
CDH13-211ENST00000568770 GPR108Q9NPR9 543 aa6.77□□□□□ -1.33
CDH13-211ENST00000568770 FAM184BQ9ULE4 1060 aa6.77□□□□□ -1.33
CDH13-211ENST00000568770 ADAMTS5Q9UNA0 930 aa6.77□□□□□ -1.33
CDH13-211ENST00000568770 INPP5FQ9Y2H2 1132 aa6.77□□□□□ -1.33
CDH13-211ENST00000568770 TMX2Q9Y320 296 aa6.77□□□□□ -1.33
CDH13-211ENST00000568770 GREB1LQ9C091 1923 aaPredicted RBP6.77□□□□□ -1.33
CDH13-211ENST00000568770 ELP1O95163 1332 aa6.76□□□□□ -1.33
CDH13-211ENST00000568770 A0A0U1RQG5 324 aaPredicted RBP6.76□□□□□ -1.33
CDH13-211ENST00000568770 ARVCFO00192 962 aa6.76□□□□□ -1.33
CDH13-211ENST00000568770 ERC2O15083 957 aa6.76□□□□□ -1.33
CDH13-211ENST00000568770 WDR46O15213 610 aaKnown RBP6.76□□□□□ -1.33
CDH13-211ENST00000568770 DHX15O43143 795 aaKnown RBP6.76□□□□□ -1.33
CDH13-211ENST00000568770 ADCY6O43306 1168 aa6.76□□□□□ -1.33
CDH13-211ENST00000568770 DNAJA2O60884 412 aa6.76□□□□□ -1.33
CDH13-211ENST00000568770 DUSP11O75319 330 aaKnown RBP6.76□□□□□ -1.33
CDH13-211ENST00000568770 SNAI1O95863 264 aaPredicted RBP6.76□□□□□ -1.33
CDH13-211ENST00000568770 CD4P01730 458 aa6.76□□□□□ -1.33
CDH13-211ENST00000568770 FGBP02675 491 aa6.76□□□□□ -1.33
CDH13-211ENST00000568770 C6orf222P0C671 652 aaPredicted RBP6.76□□□□□ -1.33
CDH13-211ENST00000568770 MYOGP15173 224 aa6.76□□□□□ -1.33
CDH13-211ENST00000568770 CST5P28325 142 aaPredicted RBP6.76□□□□□ -1.33
CDH13-211ENST00000568770 STAT3P40763 770 aa6.76□□□□□ -1.33
CDH13-211ENST00000568770 OS9Q13438 667 aaPredicted RBP6.76□□□□□ -1.33
CDH13-211ENST00000568770 NFKBIBQ15653 356 aa6.76□□□□□ -1.33
CDH13-211ENST00000568770 TMEM179Q6ZVK1 233 aa6.76□□□□□ -1.33
CDH13-211ENST00000568770 PCSK9Q8NBP7 692 aaKnown RBP6.76□□□□□ -1.33
CDH13-211ENST00000568770 GPRASP2Q96D09 838 aa6.76□□□□□ -1.33
CDH13-211ENST00000568770 FAM83CQ9BQN1 747 aa6.76□□□□□ -1.33
CDH13-211ENST00000568770 RIOK1Q9BRS2 568 aaKnown RBP6.76□□□□□ -1.33
CDH13-211ENST00000568770 CCDC8Q9H0W5 538 aaPredicted RBP6.76□□□□□ -1.33
CDH13-211ENST00000568770 ANTXR1Q9H6X2 564 aa6.76□□□□□ -1.33
CDH13-211ENST00000568770 C7orf69Q9H7B7 122 aa6.76□□□□□ -1.33
CDH13-211ENST00000568770 VCPKMTQ9H867 229 aa6.76□□□□□ -1.33
CDH13-211ENST00000568770 PIDD1Q9HB75 910 aa6.76□□□□□ -1.33
CDH13-211ENST00000568770 C1GALT1Q9NS00 363 aa6.76□□□□□ -1.33
CDH13-211ENST00000568770 FBXO28Q9NVF7 368 aa6.76□□□□□ -1.33
CDH13-211ENST00000568770 MCM9Q9NXL9 1143 aa6.76□□□□□ -1.33
CDH13-211ENST00000568770 DBNLQ9UJU6 430 aaKnown RBP6.76□□□□□ -1.33
CDH13-211ENST00000568770 ZHX1Q9UKY1 873 aaPredicted RBP6.76□□□□□ -1.33
CDH13-211ENST00000568770 RAXQ9Y2V3 346 aa6.76□□□□□ -1.33
CDH13-211ENST00000568770 PCDHB14Q9Y5E9 798 aa6.76□□□□□ -1.33
CDH13-211ENST00000568770 TANC1Q9C0D5 1861 aa6.76□□□□□ -1.33
CDH13-211ENST00000568770 UMODL1Q5DID0 1318 aa6.76□□□□□ -1.33
CDH13-211ENST00000568770 FAM95CA0A1B0GW59 222 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 FAM86C2PA6NEL3 165 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 UPK3BL1B0FP48 263 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 UPK3BL2E5RIL1 263 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 RFXAPO00287 272 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 VWA5AO00534 786 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 SURF6O75683 361 aaKnown RBP6.75□□□□□ -1.33
CDH13-211ENST00000568770 FURINP09958 794 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 CT47B1P0C2W7 299 aaPredicted RBP6.75□□□□□ -1.33
CDH13-211ENST00000568770 CYP2D6P10635 497 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 AKR1B1P15121 316 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 MCM4P33991 863 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 ADMP35318 185 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 GJA9P57773 515 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 ETF1P62495 437 aaKnown RBP6.75□□□□□ -1.33
CDH13-211ENST00000568770 HNRNPUQ00839 825 aaKnown RBP eCLIP6.75□□□□□ -1.33
CDH13-211ENST00000568770 ICA1Q05084 483 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 ACVR2BQ13705 512 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 SLBPQ14493 270 aaKnown RBP eCLIP6.75□□□□□ -1.33
CDH13-211ENST00000568770 CCDC144BQ3MJ40 725 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 TMEM31Q5JXX7 168 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 MAMDC4Q6UXC1 1216 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 GK5Q6ZS86 529 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 TRMT2AQ8IZ69 625 aaKnown RBP6.75□□□□□ -1.33
CDH13-211ENST00000568770 MSL3Q8N5Y2 521 aaKnown RBP6.75□□□□□ -1.33
CDH13-211ENST00000568770 TET1Q8NFU7 2136 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 RASGRP4Q8TDF6 673 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 SDR42E1Q8WUS8 393 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 ARHGAP45Q92619 1136 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 EAF2Q96CJ1 260 aaPredicted RBP6.75□□□□□ -1.33
CDH13-211ENST00000568770 ACSF2Q96CM8 615 aaPredicted RBP6.75□□□□□ -1.33
CDH13-211ENST00000568770 DYNLL2Q96FJ2 89 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 MTIF3Q9H2K0 278 aaKnown RBP6.75□□□□□ -1.33
CDH13-211ENST00000568770 HIPK3Q9H422 1215 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 SH2D4AQ9H788 454 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 SPC25Q9HBM1 224 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 STOML1Q9UBI4 398 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 TJP2Q9UDY2 1190 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 SWAP70Q9UH65 585 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 ZNF214Q9UL59 606 aaPredicted RBP6.75□□□□□ -1.33
CDH13-211ENST00000568770 EFR3BQ9Y2G0 817 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 PCDHA11Q9Y5I1 949 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 MTCH2Q9Y6C9 303 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 SLC4A7Q9Y6M7 1214 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 LCTP09848 1927 aa6.75□□□□□ -1.33
CDH13-211ENST00000568770 CFAP54Q96N23 3096 aa6.74□□□□□ -1.33
CDH13-211ENST00000568770 SIP14410 1827 aa6.74□□□□□ -1.33
CDH13-211ENST00000568770 DNAJC25-GNG10A0A024R161 153 aa6.74□□□□□ -1.33
CDH13-211ENST00000568770 CTAGE5O15320 804 aa6.74□□□□□ -1.33
CDH13-211ENST00000568770 BCAR3O75815 825 aa6.74□□□□□ -1.33
CDH13-211ENST00000568770 HTR3BO95264 441 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms