RNA–Protein interactions for RNA: ENST00000568519.5

NEIL1-219, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 771 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-219ENST00000568519 SHC4Q6S5L8 630 aa15.77■□□□□ 0.12
NEIL1-219ENST00000568519 RASSF8Q8NHQ8 419 aa15.77■□□□□ 0.12
NEIL1-219ENST00000568519 LARP4BQ92615 738 aaKnown RBP15.77■□□□□ 0.12
NEIL1-219ENST00000568519 KIFAP3Q92845 792 aa15.77■□□□□ 0.12
NEIL1-219ENST00000568519 APBB2Q92870 758 aa15.77■□□□□ 0.12
NEIL1-219ENST00000568519 NFKBIZQ9BYH8 718 aa15.77■□□□□ 0.12
NEIL1-219ENST00000568519 FAM49AQ9H0Q0 323 aaPredicted RBP15.77■□□□□ 0.12
NEIL1-219ENST00000568519 EPHX3Q9H6B9 360 aa15.77■□□□□ 0.12
NEIL1-219ENST00000568519 SUGCTQ9HAC7 445 aa15.77■□□□□ 0.12
NEIL1-219ENST00000568519 C17orf75Q9HAS0 396 aa15.77■□□□□ 0.12
NEIL1-219ENST00000568519 FAM13BQ9NYF5 915 aa15.77■□□□□ 0.12
NEIL1-219ENST00000568519 AKT3Q9Y243 479 aa15.77■□□□□ 0.12
NEIL1-219ENST00000568519 CDY2AQ9Y6F7 541 aa15.77■□□□□ 0.12
NEIL1-219ENST00000568519 SIP14410 1827 aa15.77■□□□□ 0.11
NEIL1-219ENST00000568519 EFCAB14O75071 495 aa15.76■□□□□ 0.11
NEIL1-219ENST00000568519 GPR32O75388 356 aa15.76■□□□□ 0.11
NEIL1-219ENST00000568519 PLA2G4BP0C869 781 aa15.76■□□□□ 0.11
NEIL1-219ENST00000568519 ARL2P36404 184 aa15.76■□□□□ 0.11
NEIL1-219ENST00000568519 GPC3P51654 580 aa15.76■□□□□ 0.11
NEIL1-219ENST00000568519 FBXO47Q5MNV8 452 aa15.76■□□□□ 0.11
NEIL1-219ENST00000568519 RRAGBQ5VZM2 374 aa15.76■□□□□ 0.11
NEIL1-219ENST00000568519 TSHZ1Q6ZSZ6 1077 aa15.76■□□□□ 0.11
NEIL1-219ENST00000568519 C1orf186Q6ZWK4 172 aa15.76■□□□□ 0.11
NEIL1-219ENST00000568519 USP49Q70CQ1 688 aa15.76■□□□□ 0.11
NEIL1-219ENST00000568519 KCNK18Q7Z418 384 aa15.76■□□□□ 0.11
NEIL1-219ENST00000568519 IFNLR1Q8IU57 520 aaPredicted RBP15.76■□□□□ 0.11
NEIL1-219ENST00000568519 LRRC71Q8N4P6 559 aa15.76■□□□□ 0.11
NEIL1-219ENST00000568519 RAD54LQ92698 747 aa15.76■□□□□ 0.11
NEIL1-219ENST00000568519 SH2D3AQ9BRG2 576 aa15.76■□□□□ 0.11
NEIL1-219ENST00000568519 INO80BQ9C086 356 aaPredicted RBP15.76■□□□□ 0.11
NEIL1-219ENST00000568519 LRRC27Q9C0I9 530 aa15.76■□□□□ 0.11
NEIL1-219ENST00000568519 ADAMTS10Q9H324 1103 aa15.76■□□□□ 0.11
NEIL1-219ENST00000568519 BLOC1S4Q9NUP1 217 aa15.76■□□□□ 0.11
NEIL1-219ENST00000568519 SUCLA2Q9P2R7 463 aaPredicted RBP15.76■□□□□ 0.11
NEIL1-219ENST00000568519 USP25Q9UHP3 1055 aa15.76■□□□□ 0.11
NEIL1-219ENST00000568519 COL4A3BPQ9Y5P4 624 aa15.76■□□□□ 0.11
NEIL1-219ENST00000568519 USO1O60763 962 aaKnown RBP15.75■□□□□ 0.11
NEIL1-219ENST00000568519 BAIAP3O94812 1187 aa15.75■□□□□ 0.11
NEIL1-219ENST00000568519 SCP2P22307 547 aa15.75■□□□□ 0.11
NEIL1-219ENST00000568519 CCL23P55773 120 aa15.75■□□□□ 0.11
NEIL1-219ENST00000568519 TFDP1Q14186 410 aa15.75■□□□□ 0.11
NEIL1-219ENST00000568519 MBTPS1Q14703 1052 aa15.75■□□□□ 0.11
NEIL1-219ENST00000568519 GPNMBQ14956 572 aa15.75■□□□□ 0.11
NEIL1-219ENST00000568519 PPP2R5AQ15172 486 aa15.75■□□□□ 0.11
NEIL1-219ENST00000568519 E2F4Q16254 413 aa15.75■□□□□ 0.11
NEIL1-219ENST00000568519 PLEKHG4Q58EX7 1191 aa15.75■□□□□ 0.11
NEIL1-219ENST00000568519 SPECC1Q5M775 1068 aa15.75■□□□□ 0.11
NEIL1-219ENST00000568519 RINT1Q6NUQ1 792 aa15.75■□□□□ 0.11
NEIL1-219ENST00000568519 OTOP2Q7RTS6 562 aa15.75■□□□□ 0.11
NEIL1-219ENST00000568519 IQUBQ8NA54 791 aa15.75■□□□□ 0.11
NEIL1-219ENST00000568519 TMEM87AQ8NBN3 555 aa15.75■□□□□ 0.11
NEIL1-219ENST00000568519 PRPF31Q8WWY3 499 aaKnown RBP15.75■□□□□ 0.11
NEIL1-219ENST00000568519 KHSRPQ92945 711 aaKnown RBP eCLIP15.75■□□□□ 0.11
NEIL1-219ENST00000568519 VWCEQ96DN2 955 aa15.75■□□□□ 0.11
NEIL1-219ENST00000568519 ZBTB10Q96DT7 871 aa15.75■□□□□ 0.11
NEIL1-219ENST00000568519 DRC1Q96MC2 740 aa15.75■□□□□ 0.11
NEIL1-219ENST00000568519 ODF2LQ9ULJ1 636 aa15.75■□□□□ 0.11
NEIL1-219ENST00000568519 PHLPP2Q6ZVD8 1323 aa15.74■□□□□ 0.11
NEIL1-219ENST00000568519 NBNO60934 754 aa15.74■□□□□ 0.11
NEIL1-219ENST00000568519 VTNP04004 478 aa15.74■□□□□ 0.11
NEIL1-219ENST00000568519 CTSHP09668 335 aa15.74■□□□□ 0.11
NEIL1-219ENST00000568519 ACTN1P12814 892 aa15.74■□□□□ 0.11
NEIL1-219ENST00000568519 EIF4BP23588 611 aaKnown RBP15.74■□□□□ 0.11
NEIL1-219ENST00000568519 STAT6P42226 847 aa15.74■□□□□ 0.11
NEIL1-219ENST00000568519 NLRP11P59045 1033 aaKnown RBP15.74■□□□□ 0.11
NEIL1-219ENST00000568519 LAMTOR4Q0VGL1 99 aa15.74■□□□□ 0.11
NEIL1-219ENST00000568519 ZRSR1Q15695 479 aaKnown RBP15.74■□□□□ 0.11
NEIL1-219ENST00000568519 NAALADL2Q58DX5 795 aa15.74■□□□□ 0.11
NEIL1-219ENST00000568519 CNKSR3Q6P9H4 555 aa15.74■□□□□ 0.11
NEIL1-219ENST00000568519 SRGAP1Q7Z6B7 1085 aa15.74■□□□□ 0.11
NEIL1-219ENST00000568519 KCNN1Q92952 543 aa15.74■□□□□ 0.11
NEIL1-219ENST00000568519 SCLYQ96I15 445 aa15.74■□□□□ 0.11
NEIL1-219ENST00000568519 FTHL17Q9BXU8 183 aa15.74■□□□□ 0.11
NEIL1-219ENST00000568519 GCOM2Q9BZD3 368 aaPredicted RBP15.74■□□□□ 0.11
NEIL1-219ENST00000568519 MTIF3Q9H2K0 278 aaKnown RBP15.74■□□□□ 0.11
NEIL1-219ENST00000568519 TNMDQ9H2S6 317 aa15.74■□□□□ 0.11
NEIL1-219ENST00000568519 MSRAQ9UJ68 235 aa15.74■□□□□ 0.11
NEIL1-219ENST00000568519 HPSEQ9Y251 543 aa15.74■□□□□ 0.11
NEIL1-219ENST00000568519 SCN5AQ14524 2016 aa15.73■□□□□ 0.11
NEIL1-219ENST00000568519 ABHD14A-ACY1A0A1B0GW23 586 aa15.73■□□□□ 0.11
NEIL1-219ENST00000568519 DARSP14868 501 aaKnown RBP15.73■□□□□ 0.11
NEIL1-219ENST00000568519 NAMPTP43490 491 aa15.73■□□□□ 0.11
NEIL1-219ENST00000568519 DRP2Q13474 957 aa15.73■□□□□ 0.11
NEIL1-219ENST00000568519 LPIN1Q14693 890 aa15.73■□□□□ 0.11
NEIL1-219ENST00000568519 CNNM4Q6P4Q7 775 aa15.73■□□□□ 0.11
NEIL1-219ENST00000568519 SV2BQ7L1I2 683 aa15.73■□□□□ 0.11
NEIL1-219ENST00000568519 RHPN2Q8IUC4 686 aa15.73■□□□□ 0.11
NEIL1-219ENST00000568519 HERVK_113Q902F9 699 aa15.73■□□□□ 0.11
NEIL1-219ENST00000568519 SEPT8Q92599 483 aa15.73■□□□□ 0.11
NEIL1-219ENST00000568519 TMEM143Q96AN5 459 aa15.73■□□□□ 0.11
NEIL1-219ENST00000568519 LRFN3Q9BTN0 628 aa15.73■□□□□ 0.11
NEIL1-219ENST00000568519 POLR3FQ9H1D9 316 aaPredicted RBP15.73■□□□□ 0.11
NEIL1-219ENST00000568519 CERS4Q9HA82 394 aa15.73■□□□□ 0.11
NEIL1-219ENST00000568519 KCNH3Q9ULD8 1083 aa15.73■□□□□ 0.11
NEIL1-219ENST00000568519 EPOPA6NHQ4 379 aa15.72■□□□□ 0.11
NEIL1-219ENST00000568519 GPR182O15218 404 aa15.72■□□□□ 0.11
NEIL1-219ENST00000568519 FGBP02675 491 aa15.72■□□□□ 0.11
NEIL1-219ENST00000568519 SFPQP23246 707 aaKnown RBP eCLIP15.72■□□□□ 0.11
NEIL1-219ENST00000568519 ABCD1P33897 745 aa15.72■□□□□ 0.11
NEIL1-219ENST00000568519 PHKA2P46019 1235 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms