RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 COL19A1Q14993 1142 aa9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 EMC2Q15006 297 aa9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 ECM1Q16610 540 aa9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 XKR9Q5GH70 373 aa9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 HYIQ5T013 277 aa9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 LARP1BQ659C4 914 aaKnown RBP9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 FAM117BQ6P1L5 589 aa9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 FIBCD1Q8N539 461 aa9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 ERMNQ8TAM6 284 aa9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 PSPC1Q8WXF1 523 aaKnown RBP9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 ARNTL2Q8WYA1 636 aa9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 NACC1Q96RE7 527 aa9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 MTRQ99707 1265 aa9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 C17orf80Q9BSJ5 609 aa9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 MMTAG2Q9BU76 263 aaKnown RBP9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 CERS4Q9HA82 394 aa9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 DACT1Q9NYF0 836 aa9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 DAXXQ9UER7 740 aaPredicted RBP9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 GINS2Q9Y248 185 aa9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 COL4A3BPQ9Y5P4 624 aa9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 MORC2Q9Y6X9 1032 aaPredicted RBP9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 NCOR1O75376 2440 aa9.12□□□□□ -0.95
HDGFL3-205ENST00000568129 DENND3A2RUS2 1198 aa9.12□□□□□ -0.95
HDGFL3-205ENST00000568129 SLC26A4O43511 780 aa9.12□□□□□ -0.95
HDGFL3-205ENST00000568129 ATF7P17544 494 aaPredicted RBP9.12□□□□□ -0.95
HDGFL3-205ENST00000568129 PDCP20941 246 aa9.12□□□□□ -0.95
HDGFL3-205ENST00000568129 HOXA11P31270 313 aaPredicted RBP9.12□□□□□ -0.95
HDGFL3-205ENST00000568129 BRAPQ7Z569 592 aa9.12□□□□□ -0.95
HDGFL3-205ENST00000568129 MRPL10Q7Z7H8 261 aaKnown RBP9.12□□□□□ -0.95
HDGFL3-205ENST00000568129 ECHDC2Q86YB7 292 aa9.12□□□□□ -0.95
HDGFL3-205ENST00000568129 RHPN2Q8IUC4 686 aa9.12□□□□□ -0.95
HDGFL3-205ENST00000568129 KSR1Q8IVT5 923 aa9.12□□□□□ -0.95
HDGFL3-205ENST00000568129 SLC17A8Q8NDX2 589 aa9.12□□□□□ -0.95
HDGFL3-205ENST00000568129 FBXO22Q8NEZ5 403 aa9.12□□□□□ -0.95
HDGFL3-205ENST00000568129 PIGOQ8TEQ8 1089 aa9.12□□□□□ -0.95
HDGFL3-205ENST00000568129 NLRP7Q8WX94 980 aa9.12□□□□□ -0.95
HDGFL3-205ENST00000568129 TMEM143Q96AN5 459 aa9.12□□□□□ -0.95
HDGFL3-205ENST00000568129 MRPL38Q96DV4 380 aaKnown RBP9.12□□□□□ -0.95
HDGFL3-205ENST00000568129 CASD1Q96PB1 797 aa9.12□□□□□ -0.95
HDGFL3-205ENST00000568129 LMAN2LQ9H0V9 348 aa9.12□□□□□ -0.95
HDGFL3-205ENST00000568129 MINDY3Q9H8M7 445 aa9.12□□□□□ -0.95
HDGFL3-205ENST00000568129 ATP6V0A4Q9HBG4 840 aa9.12□□□□□ -0.95
HDGFL3-205ENST00000568129 PCDHB7Q9Y5E2 793 aa9.12□□□□□ -0.95
HDGFL3-205ENST00000568129 TCF20Q9UGU0 1960 aaKnown RBP9.12□□□□□ -0.95
HDGFL3-205ENST00000568129 TCHHQ07283 1943 aa9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 H3BQV1 296 aa9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 K7ELQ4 463 aaPredicted RBP9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 GTPBP6O43824 516 aaPredicted RBP9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 CSDE1O75534 798 aaKnown RBP9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 SKIP12755 728 aa9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 ZSCAN20P17040 1043 aaPredicted RBP9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 CYP11B2P19099 503 aa9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 SFPQP23246 707 aaKnown RBP eCLIP9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 GLRA2P23416 452 aa9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 AXLP30530 894 aa9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 PHKA2P46019 1235 aa9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 GNL2Q13823 731 aaKnown RBP9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 CAMK1Q14012 370 aa9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 BTG3Q14201 252 aaPredicted RBP9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 AMHR2Q16671 573 aa9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 FAM187BQ17R55 369 aa9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 FAM102BQ5T8I3 360 aa9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 HAUS3Q68CZ6 603 aa9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 LRRC55Q6ZSA7 311 aa9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 MCPH1Q8NEM0 835 aa9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 ATXN2LQ8WWM7 1075 aaKnown RBP9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 KCNN1Q92952 543 aa9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 PPP1R16BQ96T49 567 aa9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 RAB34Q9BZG1 259 aa9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 TMEM117Q9H0C3 514 aa9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 CWH43Q9H720 699 aa9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 AGPAT5Q9NUQ2 364 aa9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 LRWD1Q9UFC0 647 aa9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 PLAGL2Q9UPG8 496 aa9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 MRPL42Q9Y6G3 142 aaKnown RBP9.11□□□□□ -0.95
HDGFL3-205ENST00000568129 INPPL1O15357 1258 aa9.1□□□□□ -0.95
HDGFL3-205ENST00000568129 HOXA2O43364 376 aa9.1□□□□□ -0.95
HDGFL3-205ENST00000568129 PDIA4P13667 645 aaKnown RBP9.1□□□□□ -0.95
HDGFL3-205ENST00000568129 SYT1P21579 422 aa9.1□□□□□ -0.95
HDGFL3-205ENST00000568129 FGFR4P22455 802 aa9.1□□□□□ -0.95
HDGFL3-205ENST00000568129 IGFBP4P22692 258 aa9.1□□□□□ -0.95
HDGFL3-205ENST00000568129 GPM6BQ13491 265 aa9.1□□□□□ -0.95
HDGFL3-205ENST00000568129 CLLU1OSQ5K130 101 aa9.1□□□□□ -0.95
HDGFL3-205ENST00000568129 UBXN11Q5T124 520 aa9.1□□□□□ -0.95
HDGFL3-205ENST00000568129 CDCA2Q69YH5 1023 aaPredicted RBP9.1□□□□□ -0.95
HDGFL3-205ENST00000568129 MCTP1Q6DN14 999 aa9.1□□□□□ -0.95
HDGFL3-205ENST00000568129 POTEGQ6S5H5 508 aa9.1□□□□□ -0.95
HDGFL3-205ENST00000568129 DTHD1Q6ZMT9 781 aa9.1□□□□□ -0.95
HDGFL3-205ENST00000568129 PPP4R3CPQ6ZMV5 832 aa9.1□□□□□ -0.95
HDGFL3-205ENST00000568129 RNF149Q8NC42 400 aa9.1□□□□□ -0.95
HDGFL3-205ENST00000568129 SPPL3Q8TCT6 385 aa9.1□□□□□ -0.95
HDGFL3-205ENST00000568129 ASAP3Q8TDY4 903 aa9.1□□□□□ -0.95
HDGFL3-205ENST00000568129 GDPD5Q8WTR4 605 aa9.1□□□□□ -0.95
HDGFL3-205ENST00000568129 ZNF668Q96K58 619 aaPredicted RBP9.1□□□□□ -0.95
HDGFL3-205ENST00000568129 AK8Q96MA6 479 aa9.1□□□□□ -0.95
HDGFL3-205ENST00000568129 C11orf84Q9BUA3 381 aaPredicted RBP9.1□□□□□ -0.95
HDGFL3-205ENST00000568129 FZD8Q9H461 694 aa9.1□□□□□ -0.95
HDGFL3-205ENST00000568129 LRFN2Q9ULH4 789 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms