RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 PCDHB6Q9Y5E3 794 aa28.09■■■□□ 2.09
FANCA-228ENST00000567943 A0A087WWV3 80 aa28.08■■■□□ 2.09
FANCA-228ENST00000567943 SPATA31C1P0DKV0 1188 aa28.08■■■□□ 2.09
FANCA-228ENST00000567943 RFC5P40937 340 aa28.08■■■□□ 2.09
FANCA-228ENST00000567943 POLGP54098 1239 aaPredicted RBP28.08■■■□□ 2.09
FANCA-228ENST00000567943 CAMK1Q14012 370 aa28.08■■■□□ 2.09
FANCA-228ENST00000567943 C4orf32Q8N8J7 132 aa28.08■■■□□ 2.09
FANCA-228ENST00000567943 C11orf84Q9BUA3 381 aaPredicted RBP28.08■■■□□ 2.09
FANCA-228ENST00000567943 XPNPEP1Q9NQW7 623 aa28.08■■■□□ 2.09
FANCA-228ENST00000567943 COL4A3BPQ9Y5P4 624 aa28.08■■■□□ 2.09
FANCA-228ENST00000567943 NCOR1O75376 2440 aa28.07■■■□□ 2.08
FANCA-228ENST00000567943 EMC2Q15006 297 aa28.07■■■□□ 2.08
FANCA-228ENST00000567943 PTPROQ16827 1216 aa28.07■■■□□ 2.08
FANCA-228ENST00000567943 ECHDC2Q86YB7 292 aa28.07■■■□□ 2.08
FANCA-228ENST00000567943 HLA-CQ95604 372 aa28.07■■■□□ 2.08
FANCA-228ENST00000567943 NLRP4Q96MN2 994 aa28.07■■■□□ 2.08
FANCA-228ENST00000567943 PLVAPQ9BX97 442 aa28.07■■■□□ 2.08
FANCA-228ENST00000567943 COG5Q9UP83 839 aa28.07■■■□□ 2.08
FANCA-228ENST00000567943 PLAGL2Q9UPG8 496 aa28.07■■■□□ 2.08
FANCA-228ENST00000567943 TBKBP1A7MCY6 615 aa28.06■■■□□ 2.08
FANCA-228ENST00000567943 BMP1P13497 986 aa28.06■■■□□ 2.08
FANCA-228ENST00000567943 ZSCAN20P17040 1043 aaPredicted RBP28.06■■■□□ 2.08
FANCA-228ENST00000567943 ATF7P17544 494 aaPredicted RBP28.06■■■□□ 2.08
FANCA-228ENST00000567943 KCNQ1P51787 676 aa28.06■■■□□ 2.08
FANCA-228ENST00000567943 MINDY3Q9H8M7 445 aa28.06■■■□□ 2.08
FANCA-228ENST00000567943 ATP6V0A4Q9HBG4 840 aa28.06■■■□□ 2.08
FANCA-228ENST00000567943 ALG13Q9NP73 1137 aaKnown RBP28.06■■■□□ 2.08
FANCA-228ENST00000567943 A0A0U1RQF3 1178 aa28.05■■■□□ 2.08
FANCA-228ENST00000567943 DNAJB1P25685 340 aa28.05■■■□□ 2.08
FANCA-228ENST00000567943 LAMTOR4Q0VGL1 99 aa28.05■■■□□ 2.08
FANCA-228ENST00000567943 PTGDRQ13258 359 aa28.05■■■□□ 2.08
FANCA-228ENST00000567943 RILPL1Q5EBL4 403 aa28.05■■■□□ 2.08
FANCA-228ENST00000567943 ZNF598Q86UK7 904 aaKnown RBP28.05■■■□□ 2.08
FANCA-228ENST00000567943 CATSPER3Q86XQ3 398 aa28.05■■■□□ 2.08
FANCA-228ENST00000567943 PIGOQ8TEQ8 1089 aa28.05■■■□□ 2.08
FANCA-228ENST00000567943 P2RX5Q93086 422 aa28.05■■■□□ 2.08
FANCA-228ENST00000567943 ANKEF1Q9NU02 776 aa28.05■■■□□ 2.08
FANCA-228ENST00000567943 BDP1A6H8Y1 2624 aa28.04■■■□□ 2.08
FANCA-228ENST00000567943 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.04■■■□□ 2.08
FANCA-228ENST00000567943 K7ELQ4 463 aaPredicted RBP28.04■■■□□ 2.08
FANCA-228ENST00000567943 MED24O75448 989 aa28.04■■■□□ 2.08
FANCA-228ENST00000567943 ITGB1P05556 798 aa28.04■■■□□ 2.08
FANCA-228ENST00000567943 LRRC55Q6ZSA7 311 aa28.04■■■□□ 2.08
FANCA-228ENST00000567943 EXOC8Q8IYI6 725 aa28.04■■■□□ 2.08
FANCA-228ENST00000567943 KLHL23Q8NBE8 558 aa28.04■■■□□ 2.08
FANCA-228ENST00000567943 ERMNQ8TAM6 284 aa28.04■■■□□ 2.08
FANCA-228ENST00000567943 PSPC1Q8WXF1 523 aaKnown RBP28.04■■■□□ 2.08
FANCA-228ENST00000567943 SYMPKQ92797 1274 aaKnown RBP28.04■■■□□ 2.08
FANCA-228ENST00000567943 CASD1Q96PB1 797 aa28.04■■■□□ 2.08
FANCA-228ENST00000567943 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.04■■■□□ 2.08
FANCA-228ENST00000567943 TYW1Q9NV66 732 aaKnown RBP28.04■■■□□ 2.08
FANCA-228ENST00000567943 RNF216Q9NWF9 866 aaPredicted RBP28.04■■■□□ 2.08
FANCA-228ENST00000567943 SRGAP2CP0DJJ0 459 aa28.03■■■□□ 2.08
FANCA-228ENST00000567943 SFPQP23246 707 aaKnown RBP eCLIP28.03■■■□□ 2.08
FANCA-228ENST00000567943 RARRES1P49788 294 aa28.03■■■□□ 2.08
FANCA-228ENST00000567943 FXR2P51116 673 aaKnown RBP eCLIP28.03■■■□□ 2.08
FANCA-228ENST00000567943 TIGD5Q53EQ6 642 aa28.03■■■□□ 2.08
FANCA-228ENST00000567943 TCEAL5Q5H9L2 206 aa28.03■■■□□ 2.08
FANCA-228ENST00000567943 CLLU1OSQ5K130 101 aa28.03■■■□□ 2.08
FANCA-228ENST00000567943 FERMT3Q86UX7 667 aa28.03■■■□□ 2.08
FANCA-228ENST00000567943 SPPL3Q8TCT6 385 aa28.03■■■□□ 2.08
FANCA-228ENST00000567943 TRAIPQ9BWF2 469 aa28.03■■■□□ 2.08
FANCA-228ENST00000567943 LMAN2LQ9H0V9 348 aa28.03■■■□□ 2.08
FANCA-228ENST00000567943 CWH43Q9H720 699 aa28.03■■■□□ 2.08
FANCA-228ENST00000567943 TUFT1Q9NNX1 390 aa28.03■■■□□ 2.08
FANCA-228ENST00000567943 CHST12Q9NRB3 414 aa28.03■■■□□ 2.08
FANCA-228ENST00000567943 GAS2O43903 313 aaKnown RBP28.02■■■□□ 2.08
FANCA-228ENST00000567943 COL19A1Q14993 1142 aa28.02■■■□□ 2.08
FANCA-228ENST00000567943 CCDC43Q96MW1 224 aaKnown RBP28.02■■■□□ 2.08
FANCA-228ENST00000567943 MTRQ99707 1265 aa28.02■■■□□ 2.08
FANCA-228ENST00000567943 POLR3CQ9BUI4 534 aaPredicted RBP28.02■■■□□ 2.08
FANCA-228ENST00000567943 INO80BQ9C086 356 aaPredicted RBP28.02■■■□□ 2.08
FANCA-228ENST00000567943 TMEM117Q9H0C3 514 aa28.02■■■□□ 2.08
FANCA-228ENST00000567943 NSUN3Q9H649 340 aaKnown RBP28.02■■■□□ 2.08
FANCA-228ENST00000567943 NAALADL2Q58DX5 795 aa28.01■■■□□ 2.07
FANCA-228ENST00000567943 ADAMTS19Q8TE59 1207 aa28.01■■■□□ 2.07
FANCA-228ENST00000567943 TCP11Q8WWU5 503 aa28.01■■■□□ 2.07
FANCA-228ENST00000567943 INTS4Q96HW7 963 aaKnown RBP28.01■■■□□ 2.07
FANCA-228ENST00000567943 UBE2ZQ9H832 354 aaPredicted RBP28.01■■■□□ 2.07
FANCA-228ENST00000567943 FOXD4L1Q9NU39 408 aa28.01■■■□□ 2.07
FANCA-228ENST00000567943 DACT1Q9NYF0 836 aa28.01■■■□□ 2.07
FANCA-228ENST00000567943 C5orf42Q9H799 3197 aa28.01■■■□□ 2.07
FANCA-228ENST00000567943 VPS37CA5D8V6 355 aaPredicted RBP28■■■□□ 2.07
FANCA-228ENST00000567943 LAD1O00515 517 aa28■■■□□ 2.07
FANCA-228ENST00000567943 XRCC6P12956 609 aaKnown RBP eCLIP28■■■□□ 2.07
FANCA-228ENST00000567943 PDCP20941 246 aa28■■■□□ 2.07
FANCA-228ENST00000567943 PHKA2P46019 1235 aa28■■■□□ 2.07
FANCA-228ENST00000567943 CATSPER4Q7RTX7 472 aa28■■■□□ 2.07
FANCA-228ENST00000567943 RNF149Q8NC42 400 aa28■■■□□ 2.07
FANCA-228ENST00000567943 RNF169Q8NCN4 708 aa28■■■□□ 2.07
FANCA-228ENST00000567943 ASAP3Q8TDY4 903 aa28■■■□□ 2.07
FANCA-228ENST00000567943 AGPAT5Q9NUQ2 364 aa28■■■□□ 2.07
FANCA-228ENST00000567943 LRWD1Q9UFC0 647 aa28■■■□□ 2.07
FANCA-228ENST00000567943 PIN4Q9Y237 131 aaKnown RBP28■■■□□ 2.07
FANCA-228ENST00000567943 ASAP2O43150 1006 aa27.99■■■□□ 2.07
FANCA-228ENST00000567943 DGAT1O75907 488 aa27.99■■■□□ 2.07
FANCA-228ENST00000567943 CSPG5O95196 566 aa27.99■■■□□ 2.07
FANCA-228ENST00000567943 EOMESO95936 686 aa27.99■■■□□ 2.07
FANCA-228ENST00000567943 RPA1P27694 616 aa27.99■■■□□ 2.07
FANCA-228ENST00000567943 HOXA11P31270 313 aaPredicted RBP27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms