RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 PPP4R1LQ9P1A2 415 aa11.4□□□□□ -0.58
NIFKP4-201ENST00000567275 SAE1Q9UBE0 346 aaPredicted RBP11.4□□□□□ -0.58
NIFKP4-201ENST00000567275 FAM184BQ9ULE4 1060 aa11.4□□□□□ -0.58
NIFKP4-201ENST00000567275 PCF11O94913 1555 aaKnown RBP11.4□□□□□ -0.58
NIFKP4-201ENST00000567275 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.4□□□□□ -0.59
NIFKP4-201ENST00000567275 ARID4BQ4LE39 1312 aaPredicted RBP11.39□□□□□ -0.59
NIFKP4-201ENST00000567275 KRTAP4-8A0A0G2JLE6 195 aa11.39□□□□□ -0.59
NIFKP4-201ENST00000567275 B8ZZF3 427 aa11.39□□□□□ -0.59
NIFKP4-201ENST00000567275 PRPF6O94906 941 aaKnown RBP11.39□□□□□ -0.59
NIFKP4-201ENST00000567275 LSP1P33241 339 aa11.39□□□□□ -0.59
NIFKP4-201ENST00000567275 BCAR1P56945 870 aa11.39□□□□□ -0.59
NIFKP4-201ENST00000567275 ADCY2Q08462 1091 aa11.39□□□□□ -0.59
NIFKP4-201ENST00000567275 TRIM68Q6AZZ1 485 aa11.39□□□□□ -0.59
NIFKP4-201ENST00000567275 RICTORQ6R327 1708 aa11.39□□□□□ -0.59
NIFKP4-201ENST00000567275 EMC7Q9NPA0 242 aa11.39□□□□□ -0.59
NIFKP4-201ENST00000567275 KCMF1Q9P0J7 381 aa11.39□□□□□ -0.59
NIFKP4-201ENST00000567275 MAGEL2Q9UJ55 1249 aa11.39□□□□□ -0.59
NIFKP4-201ENST00000567275 PLCH2O75038 1416 aa11.38□□□□□ -0.59
NIFKP4-201ENST00000567275 FMN1Q68DA7 1419 aa11.38□□□□□ -0.59
NIFKP4-201ENST00000567275 MAFGO15525 162 aa11.38□□□□□ -0.59
NIFKP4-201ENST00000567275 MRE11P49959 708 aa11.38□□□□□ -0.59
NIFKP4-201ENST00000567275 STRN3Q13033 797 aa11.38□□□□□ -0.59
NIFKP4-201ENST00000567275 DGKDQ16760 1214 aa11.38□□□□□ -0.59
NIFKP4-201ENST00000567275 AGBL4Q5VU57 503 aa11.38□□□□□ -0.59
NIFKP4-201ENST00000567275 LIMS2Q7Z4I7 341 aa11.38□□□□□ -0.59
NIFKP4-201ENST00000567275 OR5AN1Q8NGI8 311 aa11.38□□□□□ -0.59
NIFKP4-201ENST00000567275 LMF1Q96S06 567 aa11.38□□□□□ -0.59
NIFKP4-201ENST00000567275 TTC1Q99614 292 aa11.38□□□□□ -0.59
NIFKP4-201ENST00000567275 PTPN18Q99952 460 aa11.38□□□□□ -0.59
NIFKP4-201ENST00000567275 MYL10Q9BUA6 226 aa11.38□□□□□ -0.59
NIFKP4-201ENST00000567275 IFT22Q9H7X7 185 aa11.38□□□□□ -0.59
NIFKP4-201ENST00000567275 SEC61A2Q9H9S3 476 aa11.38□□□□□ -0.59
NIFKP4-201ENST00000567275 MSRAQ9UJ68 235 aa11.38□□□□□ -0.59
NIFKP4-201ENST00000567275 NR2E1Q9Y466 385 aa11.38□□□□□ -0.59
NIFKP4-201ENST00000567275 LMTK3Q96Q04 1460 aa11.38□□□□□ -0.59
NIFKP4-201ENST00000567275 RAB11FIP3O75154 756 aa11.37□□□□□ -0.59
NIFKP4-201ENST00000567275 RAC3P60763 192 aa11.37□□□□□ -0.59
NIFKP4-201ENST00000567275 PHC1P78364 1004 aa11.37□□□□□ -0.59
NIFKP4-201ENST00000567275 ZNF827Q17R98 1081 aa11.37□□□□□ -0.59
NIFKP4-201ENST00000567275 ATP13A4Q4VNC1 1196 aa11.37□□□□□ -0.59
NIFKP4-201ENST00000567275 GPR158Q5T848 1215 aa11.37□□□□□ -0.59
NIFKP4-201ENST00000567275 ZNF610Q8N9Z0 462 aa11.37□□□□□ -0.59
NIFKP4-201ENST00000567275 LRRC37BQ96QE4 947 aa11.37□□□□□ -0.59
NIFKP4-201ENST00000567275 RBM15Q96T37 977 aaKnown RBP eCLIP11.37□□□□□ -0.59
NIFKP4-201ENST00000567275 OR10A2Q9H208 303 aa11.37□□□□□ -0.59
NIFKP4-201ENST00000567275 USP36Q9P275 1121 aaKnown RBP11.37□□□□□ -0.59
NIFKP4-201ENST00000567275 CNOT11Q9UKZ1 510 aaKnown RBP11.37□□□□□ -0.59
NIFKP4-201ENST00000567275 PRKAB1Q9Y478 270 aa11.37□□□□□ -0.59
NIFKP4-201ENST00000567275 MADDQ8WXG6 1647 aa11.37□□□□□ -0.59
NIFKP4-201ENST00000567275 ZFYVE16Q7Z3T8 1539 aa11.36□□□□□ -0.59
NIFKP4-201ENST00000567275 DDB1Q16531 1140 aa11.36□□□□□ -0.59
NIFKP4-201ENST00000567275 RNF151Q2KHN1 245 aa11.36□□□□□ -0.59
NIFKP4-201ENST00000567275 KIAA1841Q6NSI8 718 aa11.36□□□□□ -0.59
NIFKP4-201ENST00000567275 ESPNLQ6ZVH7 1005 aa11.36□□□□□ -0.59
NIFKP4-201ENST00000567275 USP30Q70CQ3 517 aa11.36□□□□□ -0.59
NIFKP4-201ENST00000567275 ARHGAP6O43182 974 aa11.35□□□□□ -0.59
NIFKP4-201ENST00000567275 BPIP17213 487 aa11.35□□□□□ -0.59
NIFKP4-201ENST00000567275 CNGA1P29973 690 aa11.35□□□□□ -0.59
NIFKP4-201ENST00000567275 TERF2Q15554 542 aa11.35□□□□□ -0.59
NIFKP4-201ENST00000567275 CIR1Q86X95 450 aaPredicted RBP11.35□□□□□ -0.59
NIFKP4-201ENST00000567275 BCL6BQ8N143 479 aaPredicted RBP11.35□□□□□ -0.59
NIFKP4-201ENST00000567275 SLC5A5Q92911 643 aa11.35□□□□□ -0.59
NIFKP4-201ENST00000567275 NEIL1Q96FI4 390 aaPredicted RBP11.35□□□□□ -0.59
NIFKP4-201ENST00000567275 LOXL4Q96JB6 756 aa11.35□□□□□ -0.59
NIFKP4-201ENST00000567275 VWA7Q9Y334 891 aa11.35□□□□□ -0.59
NIFKP4-201ENST00000567275 TTC37Q6PGP7 1564 aa11.34□□□□□ -0.59
NIFKP4-201ENST00000567275 KRTAP9-7A8MTY7 169 aa11.34□□□□□ -0.59
NIFKP4-201ENST00000567275 NEMP1O14524 444 aa11.34□□□□□ -0.59
NIFKP4-201ENST00000567275 ZEB2O60315 1214 aa11.34□□□□□ -0.59
NIFKP4-201ENST00000567275 EFCAB2Q5VUJ9 269 aa11.34□□□□□ -0.59
NIFKP4-201ENST00000567275 BROXQ5VW32 411 aa11.34□□□□□ -0.59
NIFKP4-201ENST00000567275 KLHDC10Q6PID8 442 aa11.34□□□□□ -0.59
NIFKP4-201ENST00000567275 KANSL1Q7Z3B3 1105 aa11.34□□□□□ -0.59
NIFKP4-201ENST00000567275 FERMT2Q96AC1 680 aa11.34□□□□□ -0.59
NIFKP4-201ENST00000567275 MEGF9Q9H1U4 602 aa11.34□□□□□ -0.59
NIFKP4-201ENST00000567275 TMX1Q9H3N1 280 aa11.34□□□□□ -0.59
NIFKP4-201ENST00000567275 DENND2AQ9ULE3 1009 aa11.34□□□□□ -0.59
NIFKP4-201ENST00000567275 SYNPO2Q9UMS6 1093 aa11.34□□□□□ -0.59
NIFKP4-201ENST00000567275 ST20-MTHFSA0A0A6YYL1 179 aa11.33□□□□□ -0.6
NIFKP4-201ENST00000567275 PRRG2O14669 202 aa11.33□□□□□ -0.6
NIFKP4-201ENST00000567275 SESN2P58004 480 aaPredicted RBP11.33□□□□□ -0.6
NIFKP4-201ENST00000567275 ANTXR2P58335 489 aa11.33□□□□□ -0.6
NIFKP4-201ENST00000567275 TBR1Q16650 682 aa11.33□□□□□ -0.6
NIFKP4-201ENST00000567275 UNQ6494/PRO21346Q6UXR6 183 aa11.33□□□□□ -0.6
NIFKP4-201ENST00000567275 BMP8AQ7Z5Y6 402 aa11.33□□□□□ -0.6
NIFKP4-201ENST00000567275 STRA8Q7Z7C7 330 aa11.33□□□□□ -0.6
NIFKP4-201ENST00000567275 DYDC2Q96IM9 177 aa11.33□□□□□ -0.6
NIFKP4-201ENST00000567275 ZNF496Q96IT1 587 aaPredicted RBP11.33□□□□□ -0.6
NIFKP4-201ENST00000567275 C12orf65Q9H3J6 166 aaKnown RBP11.33□□□□□ -0.6
NIFKP4-201ENST00000567275 SEMA4AQ9H3S1 761 aa11.33□□□□□ -0.6
NIFKP4-201ENST00000567275 MTG2Q9H4K7 406 aa11.33□□□□□ -0.6
NIFKP4-201ENST00000567275 APOBEC2Q9Y235 224 aaKnown RBP11.33□□□□□ -0.6
NIFKP4-201ENST00000567275 SCAPERQ9BY12 1400 aa11.33□□□□□ -0.6
NIFKP4-201ENST00000567275 H2AFYO75367 372 aaKnown RBP11.32□□□□□ -0.6
NIFKP4-201ENST00000567275 ADAM15Q13444 863 aa11.32□□□□□ -0.6
NIFKP4-201ENST00000567275 NFYCQ13952 458 aa11.32□□□□□ -0.6
NIFKP4-201ENST00000567275 GIMAP8Q8ND71 665 aaPredicted RBP11.32□□□□□ -0.6
NIFKP4-201ENST00000567275 SSBP3Q9BWW4 388 aaPredicted RBP11.32□□□□□ -0.6
NIFKP4-201ENST00000567275 MS4A5Q9H3V2 200 aa11.32□□□□□ -0.6
NIFKP4-201ENST00000567275 PUF60Q9UHX1 559 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms