RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 STAT6P42226 847 aa18.55■□□□□ 0.56
CLN6-208ENST00000567060 MXD4Q14582 209 aaPredicted RBP18.55■□□□□ 0.56
CLN6-208ENST00000567060 USP49Q70CQ1 688 aa18.55■□□□□ 0.56
CLN6-208ENST00000567060 KIAA0319LQ8IZA0 1049 aa18.55■□□□□ 0.56
CLN6-208ENST00000567060 METTL13Q8N6R0 699 aa18.55■□□□□ 0.56
CLN6-208ENST00000567060 DHX38Q92620 1227 aaKnown RBP18.55■□□□□ 0.56
CLN6-208ENST00000567060 RAD54LQ92698 747 aa18.55■□□□□ 0.56
CLN6-208ENST00000567060 CCDC34Q96HJ3 373 aa18.55■□□□□ 0.56
CLN6-208ENST00000567060 C17orf75Q9HAS0 396 aa18.55■□□□□ 0.56
CLN6-208ENST00000567060 TMEM150BA6NC51 233 aa18.54■□□□□ 0.56
CLN6-208ENST00000567060 ZBTB39O15060 712 aa18.54■□□□□ 0.56
CLN6-208ENST00000567060 TLL1O43897 1013 aa18.54■□□□□ 0.56
CLN6-208ENST00000567060 PFKMP08237 780 aa18.54■□□□□ 0.56
CLN6-208ENST00000567060 PLA2G4BP0C869 781 aa18.54■□□□□ 0.56
CLN6-208ENST00000567060 GUCY2CP25092 1073 aa18.54■□□□□ 0.56
CLN6-208ENST00000567060 THPOP40225 353 aa18.54■□□□□ 0.56
CLN6-208ENST00000567060 SLC12A3P55017 1021 aa18.54■□□□□ 0.56
CLN6-208ENST00000567060 AMPD3Q01432 767 aa18.54■□□□□ 0.56
CLN6-208ENST00000567060 POU5F1BQ06416 359 aa18.54■□□□□ 0.56
CLN6-208ENST00000567060 AAK1Q2M2I8 961 aa18.54■□□□□ 0.56
CLN6-208ENST00000567060 RUFY4Q6ZNE9 571 aa18.54■□□□□ 0.56
CLN6-208ENST00000567060 LRRC8DQ7L1W4 858 aa18.54■□□□□ 0.56
CLN6-208ENST00000567060 DEFB128Q7Z7B8 93 aa18.54■□□□□ 0.56
CLN6-208ENST00000567060 ZNF410Q86VK4 478 aa18.54■□□□□ 0.56
CLN6-208ENST00000567060 DNAJB3Q8WWF6 145 aa18.54■□□□□ 0.56
CLN6-208ENST00000567060 PSPC1Q8WXF1 523 aaKnown RBP18.54■□□□□ 0.56
CLN6-208ENST00000567060 MRPS27Q92552 414 aaKnown RBP18.54■□□□□ 0.56
CLN6-208ENST00000567060 KIFAP3Q92845 792 aa18.54■□□□□ 0.56
CLN6-208ENST00000567060 SUGCTQ9HAC7 445 aa18.54■□□□□ 0.56
CLN6-208ENST00000567060 BLOC1S4Q9NUP1 217 aa18.54■□□□□ 0.56
CLN6-208ENST00000567060 KCNH3Q9ULD8 1083 aa18.54■□□□□ 0.56
CLN6-208ENST00000567060 HPSEQ9Y251 543 aa18.54■□□□□ 0.56
CLN6-208ENST00000567060 RSPH10B2B2RC85 870 aa18.53■□□□□ 0.56
CLN6-208ENST00000567060 RSPH10BP0C881 870 aa18.53■□□□□ 0.56
CLN6-208ENST00000567060 MRPS6P82932 125 aaKnown RBP18.53■□□□□ 0.56
CLN6-208ENST00000567060 SKIV2LQ15477 1246 aaKnown RBP18.53■□□□□ 0.56
CLN6-208ENST00000567060 ODR4Q5SWX8 454 aa18.53■□□□□ 0.56
CLN6-208ENST00000567060 RINT1Q6NUQ1 792 aa18.53■□□□□ 0.56
CLN6-208ENST00000567060 C1orf186Q6ZWK4 172 aa18.53■□□□□ 0.56
CLN6-208ENST00000567060 SV2BQ7L1I2 683 aa18.53■□□□□ 0.56
CLN6-208ENST00000567060 KCNK18Q7Z418 384 aa18.53■□□□□ 0.56
CLN6-208ENST00000567060 PPP1R13LQ8WUF5 828 aa18.53■□□□□ 0.56
CLN6-208ENST00000567060 CHAMP1Q96JM3 812 aa18.53■□□□□ 0.56
CLN6-208ENST00000567060 LRFN3Q9BTN0 628 aa18.53■□□□□ 0.56
CLN6-208ENST00000567060 TANC1Q9C0D5 1861 aa18.53■□□□□ 0.56
CLN6-208ENST00000567060 TNMDQ9H2S6 317 aa18.53■□□□□ 0.56
CLN6-208ENST00000567060 GDPD2Q9HCC8 539 aa18.53■□□□□ 0.56
CLN6-208ENST00000567060 XPNPEP1Q9NQW7 623 aa18.53■□□□□ 0.56
CLN6-208ENST00000567060 BMP2KQ9NSY1 1161 aaPredicted RBP18.53■□□□□ 0.56
CLN6-208ENST00000567060 ODF2LQ9ULJ1 636 aa18.53■□□□□ 0.56
CLN6-208ENST00000567060 TRPV2Q9Y5S1 764 aa18.53■□□□□ 0.56
CLN6-208ENST00000567060 SCN5AQ14524 2016 aa18.52■□□□□ 0.56
CLN6-208ENST00000567060 GOLGA6L22H0YM25 854 aa18.52■□□□□ 0.56
CLN6-208ENST00000567060 USO1O60763 962 aaKnown RBP18.52■□□□□ 0.56
CLN6-208ENST00000567060 IQCF3P0C7M6 154 aa18.52■□□□□ 0.56
CLN6-208ENST00000567060 SCP2P22307 547 aa18.52■□□□□ 0.56
CLN6-208ENST00000567060 CLCN3P51790 818 aa18.52■□□□□ 0.56
CLN6-208ENST00000567060 TAP1Q03518 808 aa18.52■□□□□ 0.56
CLN6-208ENST00000567060 TFDP1Q14186 410 aa18.52■□□□□ 0.56
CLN6-208ENST00000567060 PPP2R5AQ15172 486 aa18.52■□□□□ 0.56
CLN6-208ENST00000567060 PCBP1Q15365 356 aaKnown RBP eCLIP18.52■□□□□ 0.56
CLN6-208ENST00000567060 E2F4Q16254 413 aa18.52■□□□□ 0.56
CLN6-208ENST00000567060 NAALADL2Q58DX5 795 aa18.52■□□□□ 0.56
CLN6-208ENST00000567060 DRC1Q96MC2 740 aa18.52■□□□□ 0.56
CLN6-208ENST00000567060 CELF4Q9BZC1 486 aaKnown RBP18.52■□□□□ 0.56
CLN6-208ENST00000567060 INO80BQ9C086 356 aaPredicted RBP18.52■□□□□ 0.56
CLN6-208ENST00000567060 FAM49AQ9H0Q0 323 aaPredicted RBP18.52■□□□□ 0.56
CLN6-208ENST00000567060 SUCLA2Q9P2R7 463 aaPredicted RBP18.52■□□□□ 0.56
CLN6-208ENST00000567060 AKT3Q9Y243 479 aa18.52■□□□□ 0.56
CLN6-208ENST00000567060 PHLPP2Q6ZVD8 1323 aa18.51■□□□□ 0.55
CLN6-208ENST00000567060 MYL1P05976 194 aa18.51■□□□□ 0.55
CLN6-208ENST00000567060 PFKFB1P16118 471 aa18.51■□□□□ 0.55
CLN6-208ENST00000567060 ARL2P36404 184 aa18.51■□□□□ 0.55
CLN6-208ENST00000567060 SYKP43405 635 aa18.51■□□□□ 0.55
CLN6-208ENST00000567060 CRYBB1P53674 252 aaPredicted RBP18.51■□□□□ 0.55
CLN6-208ENST00000567060 MGAT3Q09327 533 aa18.51■□□□□ 0.55
CLN6-208ENST00000567060 ZNF618Q5T7W0 954 aa18.51■□□□□ 0.55
CLN6-208ENST00000567060 LRRC71Q8N4P6 559 aa18.51■□□□□ 0.55
CLN6-208ENST00000567060 FSIP1Q8NA03 581 aa18.51■□□□□ 0.55
CLN6-208ENST00000567060 KHSRPQ92945 711 aaKnown RBP eCLIP18.51■□□□□ 0.558e-8■□□□□ 8.3
CLN6-208ENST00000567060 WNT8BQ93098 351 aa18.51■□□□□ 0.55
CLN6-208ENST00000567060 PLIN2Q99541 437 aa18.51■□□□□ 0.55
CLN6-208ENST00000567060 SH2D3AQ9BRG2 576 aa18.51■□□□□ 0.55
CLN6-208ENST00000567060 NFKBIZQ9BYH8 718 aa18.51■□□□□ 0.55
CLN6-208ENST00000567060 COL4A3BPQ9Y5P4 624 aa18.51■□□□□ 0.55
CLN6-208ENST00000567060 POLR2DO15514 142 aaKnown RBP18.5■□□□□ 0.55
CLN6-208ENST00000567060 ABCD1P33897 745 aa18.5■□□□□ 0.55
CLN6-208ENST00000567060 GPC3P51654 580 aa18.5■□□□□ 0.55
CLN6-208ENST00000567060 UBE2HP62256 183 aa18.5■□□□□ 0.55
CLN6-208ENST00000567060 MKRN4PQ13434 485 aaPredicted RBP18.5■□□□□ 0.55
CLN6-208ENST00000567060 KANK3Q6NY19 840 aa18.5■□□□□ 0.55
CLN6-208ENST00000567060 CNNM4Q6P4Q7 775 aa18.5■□□□□ 0.55
CLN6-208ENST00000567060 TRAF7Q6Q0C0 670 aa18.5■□□□□ 0.55
CLN6-208ENST00000567060 SPRED2Q7Z698 418 aa18.5■□□□□ 0.55
CLN6-208ENST00000567060 IFNLR1Q8IU57 520 aaPredicted RBP18.5■□□□□ 0.55
CLN6-208ENST00000567060 CEP57L1Q8IYX8 460 aa18.5■□□□□ 0.55
CLN6-208ENST00000567060 PDILTQ8N807 584 aa18.5■□□□□ 0.55
CLN6-208ENST00000567060 PHOSPHO2Q8TCD6 241 aa18.5■□□□□ 0.55
CLN6-208ENST00000567060 KBTBD4Q9NVX7 518 aa18.5■□□□□ 0.55
CLN6-208ENST00000567060 COG5Q9UP83 839 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms