RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 EDIL3O43854 480 aa17.5■□□□□ 0.39
PALB2-205ENST00000567003 CXCL14O95715 111 aa17.5■□□□□ 0.39
PALB2-205ENST00000567003 TMOD1P28289 359 aa17.5■□□□□ 0.39
PALB2-205ENST00000567003 VPS52Q8N1B4 723 aa17.5■□□□□ 0.39
PALB2-205ENST00000567003 BCL7CQ8WUZ0 217 aaPredicted RBP17.5■□□□□ 0.39
PALB2-205ENST00000567003 NLRP7Q8WX94 980 aa17.5■□□□□ 0.39
PALB2-205ENST00000567003 FAM167AQ96KS9 214 aa17.5■□□□□ 0.39
PALB2-205ENST00000567003 A0A0U1RQF3 1178 aa17.49■□□□□ 0.39
PALB2-205ENST00000567003 ESYT2A0FGR8 921 aa17.49■□□□□ 0.39
PALB2-205ENST00000567003 TMEM150BA6NC51 233 aa17.49■□□□□ 0.39
PALB2-205ENST00000567003 WDR64B1ANS9 1081 aa17.49■□□□□ 0.39
PALB2-205ENST00000567003 ZC3H11AO75152 810 aaKnown RBP eCLIP17.49■□□□□ 0.39
PALB2-205ENST00000567003 ITIH3Q06033 890 aa17.49■□□□□ 0.39
PALB2-205ENST00000567003 RNF20Q5VTR2 975 aa17.49■□□□□ 0.39
PALB2-205ENST00000567003 UBALD2Q8IYN6 164 aa17.49■□□□□ 0.39
PALB2-205ENST00000567003 TDRD5Q8NAT2 981 aaKnown RBP17.49■□□□□ 0.39
PALB2-205ENST00000567003 TMEM169Q96HH4 297 aa17.49■□□□□ 0.39
PALB2-205ENST00000567003 NECTIN4Q96NY8 510 aa17.49■□□□□ 0.39
PALB2-205ENST00000567003 SH2D3AQ9BRG2 576 aa17.49■□□□□ 0.39
PALB2-205ENST00000567003 ZMYND12Q9H0C1 365 aa17.49■□□□□ 0.39
PALB2-205ENST00000567003 ZBP1Q9H171 429 aa17.49■□□□□ 0.39
PALB2-205ENST00000567003 DISC1Q9NRI5 854 aa17.49■□□□□ 0.39
PALB2-205ENST00000567003 LIMD1Q9UGP4 676 aa17.49■□□□□ 0.39
PALB2-205ENST00000567003 DENND4AQ7Z401 1863 aa17.49■□□□□ 0.39
PALB2-205ENST00000567003 MEIS3P2A8K0S8 358 aa17.48■□□□□ 0.39
PALB2-205ENST00000567003 MSH4O15457 936 aa17.48■□□□□ 0.39
PALB2-205ENST00000567003 MTHFRP42898 656 aa17.48■□□□□ 0.39
PALB2-205ENST00000567003 PHKBQ93100 1093 aa17.48■□□□□ 0.39
PALB2-205ENST00000567003 UNC45AQ9H3U1 944 aa17.48■□□□□ 0.39
PALB2-205ENST00000567003 C6orf50Q9HD87 102 aa17.48■□□□□ 0.39
PALB2-205ENST00000567003 INPP5FQ9Y2H2 1132 aa17.48■□□□□ 0.39
PALB2-205ENST00000567003 B4GALT3O60512 393 aa17.47■□□□□ 0.39
PALB2-205ENST00000567003 ABCB7O75027 752 aa17.47■□□□□ 0.39
PALB2-205ENST00000567003 EOMESO95936 686 aa17.47■□□□□ 0.39
PALB2-205ENST00000567003 CIITAP33076 1130 aa17.47■□□□□ 0.39
PALB2-205ENST00000567003 ALDH7A1P49419 539 aaKnown RBP17.47■□□□□ 0.39
PALB2-205ENST00000567003 CACNB1Q02641 598 aaPredicted RBP17.47■□□□□ 0.39
PALB2-205ENST00000567003 TBC1D8BQ0IIM8 1120 aa17.47■□□□□ 0.39
PALB2-205ENST00000567003 MTERF2Q49AM1 385 aa17.47■□□□□ 0.39
PALB2-205ENST00000567003 KIAA1841Q6NSI8 718 aa17.47■□□□□ 0.39
PALB2-205ENST00000567003 TMC5Q6UXY8 1006 aa17.47■□□□□ 0.39
PALB2-205ENST00000567003 VN1R3Q9BXE9 311 aa17.47■□□□□ 0.39
PALB2-205ENST00000567003 MRPL9Q9BYD2 267 aaKnown RBP17.47■□□□□ 0.39
PALB2-205ENST00000567003 GBP3Q9H0R5 595 aa17.47■□□□□ 0.39
PALB2-205ENST00000567003 IRF2BPLQ9H1B7 796 aa17.47■□□□□ 0.39
PALB2-205ENST00000567003 NRBP2Q9NSY0 501 aa17.47■□□□□ 0.39
PALB2-205ENST00000567003 SEPT9Q9UHD8 586 aaPredicted RBP17.47■□□□□ 0.39
PALB2-205ENST00000567003 DBR1Q9UK59 544 aaKnown RBP17.47■□□□□ 0.39
PALB2-205ENST00000567003 DCHS1Q96JQ0 3298 aa17.47■□□□□ 0.39
PALB2-205ENST00000567003 C2orf16Q68DN1 1984 aa17.46■□□□□ 0.39
PALB2-205ENST00000567003 GVINP1Q7Z2Y8 2422 aa17.46■□□□□ 0.39
PALB2-205ENST00000567003 PRR23AA6NEV1 266 aa17.46■□□□□ 0.39
PALB2-205ENST00000567003 PHKA2P46019 1235 aa17.46■□□□□ 0.39
PALB2-205ENST00000567003 ASTLQ6HA08 431 aaPredicted RBP17.46■□□□□ 0.39
PALB2-205ENST00000567003 Q6ZUG5 572 aa17.46■□□□□ 0.39
PALB2-205ENST00000567003 FRMD5Q7Z6J6 570 aa17.46■□□□□ 0.39
PALB2-205ENST00000567003 TMEM87AQ8NBN3 555 aa17.46■□□□□ 0.39
PALB2-205ENST00000567003 SLC22A17Q8WUG5 538 aa17.46■□□□□ 0.39
PALB2-205ENST00000567003 CCDC136Q96JN2 1154 aa17.46■□□□□ 0.39
PALB2-205ENST00000567003 NRDE2Q9H7Z3 1164 aa17.46■□□□□ 0.39
PALB2-205ENST00000567003 TBC1D13Q9NVG8 400 aa17.46■□□□□ 0.39
PALB2-205ENST00000567003 DNAJB4Q9UDY4 337 aa17.46■□□□□ 0.39
PALB2-205ENST00000567003 A0A087WZ62 844 aa17.45■□□□□ 0.38
PALB2-205ENST00000567003 PROB1E7EW31 1015 aa17.45■□□□□ 0.38
PALB2-205ENST00000567003 GAS7O60861 476 aa17.45■□□□□ 0.38
PALB2-205ENST00000567003 CTSAP10619 480 aa17.45■□□□□ 0.38
PALB2-205ENST00000567003 NUBP1P53384 320 aa17.45■□□□□ 0.38
PALB2-205ENST00000567003 FGD1P98174 961 aa17.45■□□□□ 0.38
PALB2-205ENST00000567003 TARBP2Q15633 366 aaKnown RBP17.45■□□□□ 0.38
PALB2-205ENST00000567003 LRCH2Q5VUJ6 765 aa17.45■□□□□ 0.38
PALB2-205ENST00000567003 CWF19L1Q69YN2 538 aaKnown RBP17.45■□□□□ 0.38
PALB2-205ENST00000567003 TWF2Q6IBS0 349 aaKnown RBP17.45■□□□□ 0.38
PALB2-205ENST00000567003 ZDHHC14Q8IZN3 488 aa17.45■□□□□ 0.38
PALB2-205ENST00000567003 SLC5A5Q92911 643 aa17.45■□□□□ 0.38
PALB2-205ENST00000567003 BRF1Q92994 677 aa17.45■□□□□ 0.38
PALB2-205ENST00000567003 IGSF21Q96ID5 467 aa17.45■□□□□ 0.38
PALB2-205ENST00000567003 FDXACB1Q9BRP7 624 aaPredicted RBP17.45■□□□□ 0.38
PALB2-205ENST00000567003 GCOM2Q9BZD3 368 aaPredicted RBP17.45■□□□□ 0.38
PALB2-205ENST00000567003 MFSD1Q9H3U5 465 aa17.45■□□□□ 0.38
PALB2-205ENST00000567003 DZANK1Q9NVP4 752 aa17.45■□□□□ 0.38
PALB2-205ENST00000567003 DACT1Q9NYF0 836 aa17.45■□□□□ 0.38
PALB2-205ENST00000567003 VPS54Q9P1Q0 977 aa17.45■□□□□ 0.38
PALB2-205ENST00000567003 PIN4Q9Y237 131 aaKnown RBP17.45■□□□□ 0.38
PALB2-205ENST00000567003 PRPF3O43395 683 aaKnown RBP17.44■□□□□ 0.38
PALB2-205ENST00000567003 SSBP05455 408 aaKnown RBP eCLIP17.44■□□□□ 0.38
PALB2-205ENST00000567003 GALTP07902 379 aa17.44■□□□□ 0.38
PALB2-205ENST00000567003 NBL1P41271 181 aa17.44■□□□□ 0.38
PALB2-205ENST00000567003 SLC11A1P49279 550 aa17.44■□□□□ 0.38
PALB2-205ENST00000567003 RCAN1P53805 252 aa17.44■□□□□ 0.38
PALB2-205ENST00000567003 TSGA10IPQ3SY00 556 aa17.44■□□□□ 0.38
PALB2-205ENST00000567003 ATAT1Q5SQI0 421 aa17.44■□□□□ 0.38
PALB2-205ENST00000567003 CABP7Q86V35 215 aa17.44■□□□□ 0.38
PALB2-205ENST00000567003 KSR1Q8IVT5 923 aa17.44■□□□□ 0.38
PALB2-205ENST00000567003 FLCNQ8NFG4 579 aa17.44■□□□□ 0.38
PALB2-205ENST00000567003 CCDC12Q8WUD4 166 aaPredicted RBP17.44■□□□□ 0.38
PALB2-205ENST00000567003 CEP89Q96ST8 783 aa17.44■□□□□ 0.38
PALB2-205ENST00000567003 TEKT3Q9BXF9 490 aa17.44■□□□□ 0.38
PALB2-205ENST00000567003 STBD1O95210 358 aa17.43■□□□□ 0.38
PALB2-205ENST00000567003 GNA11P29992 359 aa17.43■□□□□ 0.38
PALB2-205ENST00000567003 JAK3P52333 1124 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms