RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 SPTLC2O15270 562 aa14.93□□□□□ -0.02
CLK3-218ENST00000566926 IGFBP4P22692 258 aa14.93□□□□□ -0.02
CLK3-218ENST00000566926 SFPQP23246 707 aaKnown RBP eCLIP14.93□□□□□ -0.02
CLK3-218ENST00000566926 SARSP49591 514 aaKnown RBP14.93□□□□□ -0.02
CLK3-218ENST00000566926 DRP2Q13474 957 aa14.93□□□□□ -0.02
CLK3-218ENST00000566926 EMC2Q15006 297 aa14.93□□□□□ -0.02
CLK3-218ENST00000566926 DTHD1Q6ZMT9 781 aa14.93□□□□□ -0.02
CLK3-218ENST00000566926 SLC24A5Q71RS6 500 aa14.93□□□□□ -0.02
CLK3-218ENST00000566926 RTN4RL1Q86UN2 441 aaPredicted RBP14.93□□□□□ -0.02
CLK3-218ENST00000566926 CATSPER3Q86XQ3 398 aa14.93□□□□□ -0.02
CLK3-218ENST00000566926 FIBCD1Q8N539 461 aa14.93□□□□□ -0.02
CLK3-218ENST00000566926 C4orf32Q8N8J7 132 aa14.93□□□□□ -0.02
CLK3-218ENST00000566926 LINC01599Q8WXQ3 324 aa14.93□□□□□ -0.02
CLK3-218ENST00000566926 ADAM2Q99965 735 aa14.93□□□□□ -0.02
CLK3-218ENST00000566926 TMX1Q9H3N1 280 aa14.93□□□□□ -0.02
CLK3-218ENST00000566926 CERS4Q9HA82 394 aa14.93□□□□□ -0.02
CLK3-218ENST00000566926 LRWD1Q9UFC0 647 aa14.93□□□□□ -0.02
CLK3-218ENST00000566926 RWDD3Q9Y3V2 267 aa14.93□□□□□ -0.02
CLK3-218ENST00000566926 PCDHB7Q9Y5E2 793 aa14.93□□□□□ -0.02
CLK3-218ENST00000566926 COL4A3BPQ9Y5P4 624 aa14.93□□□□□ -0.02
CLK3-218ENST00000566926 CHD9Q3L8U1 2897 aa14.93□□□□□ -0.02
CLK3-218ENST00000566926 A0A087WZ62 844 aa14.92□□□□□ -0.02
CLK3-218ENST00000566926 A0A1W2PQ27 194 aa14.92□□□□□ -0.02
CLK3-218ENST00000566926 A0A1W2PQ64 194 aa14.92□□□□□ -0.02
CLK3-218ENST00000566926 A0A1W2PQD8 194 aa14.92□□□□□ -0.02
CLK3-218ENST00000566926 SPATA31C1P0DKV0 1188 aa14.92□□□□□ -0.02
CLK3-218ENST00000566926 ME1P48163 572 aa14.92□□□□□ -0.02
CLK3-218ENST00000566926 RARRES1P49788 294 aa14.92□□□□□ -0.02
CLK3-218ENST00000566926 MXD4Q14582 209 aaPredicted RBP14.92□□□□□ -0.02
CLK3-218ENST00000566926 ZNF579Q8NAF0 562 aaKnown RBP14.92□□□□□ -0.02
CLK3-218ENST00000566926 NLRP4Q96MN2 994 aa14.92□□□□□ -0.02
CLK3-218ENST00000566926 FDXACB1Q9BRP7 624 aaPredicted RBP14.92□□□□□ -0.02
CLK3-218ENST00000566926 ATP6V0A4Q9HBG4 840 aa14.92□□□□□ -0.02
CLK3-218ENST00000566926 GDPD2Q9HCC8 539 aa14.92□□□□□ -0.02
CLK3-218ENST00000566926 CHST12Q9NRB3 414 aa14.92□□□□□ -0.02
CLK3-218ENST00000566926 DACT1Q9NYF0 836 aa14.92□□□□□ -0.02
CLK3-218ENST00000566926 DBR1Q9UK59 544 aaKnown RBP14.92□□□□□ -0.02
CLK3-218ENST00000566926 ADGRA3Q8IWK6 1321 aa14.92□□□□□ -0.02
CLK3-218ENST00000566926 MYH11P35749 1972 aa14.91□□□□□ -0.02
CLK3-218ENST00000566926 C9IYK1 514 aa14.91□□□□□ -0.02
CLK3-218ENST00000566926 ZBTB39O15060 712 aa14.91□□□□□ -0.02
CLK3-218ENST00000566926 MED24O75448 989 aa14.91□□□□□ -0.02
CLK3-218ENST00000566926 DGKIO75912 1065 aa14.91□□□□□ -0.02
CLK3-218ENST00000566926 POU3F3P20264 500 aaPredicted RBP14.91□□□□□ -0.02
CLK3-218ENST00000566926 CCT6AP40227 531 aaKnown RBP14.91□□□□□ -0.02
CLK3-218ENST00000566926 TFDP1Q14186 410 aa14.91□□□□□ -0.02
CLK3-218ENST00000566926 BTG3Q14201 252 aaPredicted RBP14.91□□□□□ -0.02
CLK3-218ENST00000566926 KRT79Q5XKE5 535 aa14.91□□□□□ -0.02
CLK3-218ENST00000566926 ARL6IP4Q66PJ3 421 aaKnown RBP14.91□□□□□ -0.02
CLK3-218ENST00000566926 ADALQ6DHV7 355 aa14.91□□□□□ -0.02
CLK3-218ENST00000566926 SRGAP1Q7Z6B7 1085 aa14.91□□□□□ -0.02
CLK3-218ENST00000566926 CMTR2Q8IYT2 770 aaKnown RBP14.91□□□□□ -0.02
CLK3-218ENST00000566926 IGSF22Q8N9C0 903 aa14.91□□□□□ -0.02
CLK3-218ENST00000566926 PIGOQ8TEQ8 1089 aa14.91□□□□□ -0.02
CLK3-218ENST00000566926 PRPF31Q8WWY3 499 aaKnown RBP14.91□□□□□ -0.02
CLK3-218ENST00000566926 TMEM143Q96AN5 459 aa14.91□□□□□ -0.02
CLK3-218ENST00000566926 ZNF689Q96CS4 500 aaPredicted RBP14.91□□□□□ -0.02
CLK3-218ENST00000566926 CHAMP1Q96JM3 812 aa14.91□□□□□ -0.02
CLK3-218ENST00000566926 ZNF668Q96K58 619 aaPredicted RBP14.91□□□□□ -0.02
CLK3-218ENST00000566926 ELAC1Q9H777 363 aaKnown RBP14.91□□□□□ -0.02
CLK3-218ENST00000566926 LMCD1Q9NZU5 365 aa14.91□□□□□ -0.02
CLK3-218ENST00000566926 CLIC4Q9Y696 253 aa14.91□□□□□ -0.02
CLK3-218ENST00000566926 COL4A4P53420 1690 aaPredicted RBP14.9□□□□□ -0.02
CLK3-218ENST00000566926 HOXA2O43364 376 aa14.9□□□□□ -0.02
CLK3-218ENST00000566926 MGEA5O60502 916 aa14.9□□□□□ -0.02
CLK3-218ENST00000566926 ARHGEF15O94989 841 aa14.9□□□□□ -0.02
CLK3-218ENST00000566926 SKIP12755 728 aa14.9□□□□□ -0.02
CLK3-218ENST00000566926 ATP2C1P98194 919 aaPredicted RBP14.9□□□□□ -0.02
CLK3-218ENST00000566926 CEBPZQ03701 1054 aaKnown RBP14.9□□□□□ -0.02
CLK3-218ENST00000566926 POU5F1BQ06416 359 aa14.9□□□□□ -0.02
CLK3-218ENST00000566926 LAMTOR4Q0VGL1 99 aa14.9□□□□□ -0.02
CLK3-218ENST00000566926 ADGRE1Q14246 886 aa14.9□□□□□ -0.02
CLK3-218ENST00000566926 DSC3Q14574 896 aa14.9□□□□□ -0.02
CLK3-218ENST00000566926 PTPAQ15257 358 aa14.9□□□□□ -0.02
CLK3-218ENST00000566926 PCBP1Q15365 356 aaKnown RBP eCLIP14.9□□□□□ -0.02
CLK3-218ENST00000566926 CRIPAKQ8N1N5 446 aa14.9□□□□□ -0.02
CLK3-218ENST00000566926 MCPH1Q8NEM0 835 aa14.9□□□□□ -0.02
CLK3-218ENST00000566926 FBXO22Q8NEZ5 403 aa14.9□□□□□ -0.02
CLK3-218ENST00000566926 SNX29Q8TEQ0 813 aa14.9□□□□□ -0.02
CLK3-218ENST00000566926 BMP2KQ9NSY1 1161 aaPredicted RBP14.9□□□□□ -0.02
CLK3-218ENST00000566926 TMEM161AQ9NX61 479 aa14.9□□□□□ -0.02
CLK3-218ENST00000566926 CHD7Q9P2D1 2997 aa14.9□□□□□ -0.02
CLK3-218ENST00000566926 KIAA1671Q9BY89 1806 aa14.89□□□□□ -0.03
CLK3-218ENST00000566926 COL6A3P12111 3177 aa14.89□□□□□ -0.03
CLK3-218ENST00000566926 CDH23Q9H251 3354 aa14.89□□□□□ -0.03
CLK3-218ENST00000566926 ARHGEF35A5YM69 484 aa14.89□□□□□ -0.03
CLK3-218ENST00000566926 RB1P06400 928 aa14.89□□□□□ -0.03
CLK3-218ENST00000566926 SRGAP2CP0DJJ0 459 aa14.89□□□□□ -0.03
CLK3-218ENST00000566926 PHKA2P46019 1235 aa14.89□□□□□ -0.03
CLK3-218ENST00000566926 FAM189BP81408 668 aa14.89□□□□□ -0.03
CLK3-218ENST00000566926 NCBP1Q09161 790 aaKnown RBP14.89□□□□□ -0.03
CLK3-218ENST00000566926 POTEGQ6S5H5 508 aa14.89□□□□□ -0.03
CLK3-218ENST00000566926 CATSPER4Q7RTX7 472 aa14.89□□□□□ -0.03
CLK3-218ENST00000566926 KSR1Q8IVT5 923 aa14.89□□□□□ -0.03
CLK3-218ENST00000566926 TMEM192Q8IY95 271 aa14.89□□□□□ -0.03
CLK3-218ENST00000566926 KCTD17Q8N5Z5 321 aa14.89□□□□□ -0.03
CLK3-218ENST00000566926 KRI1Q8N9T8 703 aaKnown RBP14.89□□□□□ -0.03
CLK3-218ENST00000566926 RNF149Q8NC42 400 aa14.89□□□□□ -0.03
CLK3-218ENST00000566926 SLC17A8Q8NDX2 589 aa14.89□□□□□ -0.03
CLK3-218ENST00000566926 RC3H2Q9HBD1 1191 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms