RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 LETM2Q2VYF4 491 aa31.05■■■□□ 2.56
UBFD1-206ENST00000566669 TMEM184AQ6ZMB5 413 aa31.05■■■□□ 2.56
UBFD1-206ENST00000566669 CEP89Q96ST8 783 aa31.05■■■□□ 2.56
UBFD1-206ENST00000566669 KCNH6Q9H252 994 aa31.05■■■□□ 2.56
UBFD1-206ENST00000566669 PFKFB2O60825 505 aa31.04■■■□□ 2.56
UBFD1-206ENST00000566669 STBD1O95210 358 aa31.04■■■□□ 2.56
UBFD1-206ENST00000566669 ATF7P17544 494 aaPredicted RBP31.04■■■□□ 2.56
UBFD1-206ENST00000566669 SCRN1Q12765 414 aa31.04■■■□□ 2.56
UBFD1-206ENST00000566669 ZNF598Q86UK7 904 aaKnown RBP31.04■■■□□ 2.56
UBFD1-206ENST00000566669 SLC7A3Q8WY07 619 aa31.04■■■□□ 2.56
UBFD1-206ENST00000566669 GJA10Q969M2 543 aa31.04■■■□□ 2.56
UBFD1-206ENST00000566669 KCNMB3Q9NPA1 279 aa31.04■■■□□ 2.56
UBFD1-206ENST00000566669 RNF19AQ9NV58 838 aa31.04■■■□□ 2.56
UBFD1-206ENST00000566669 SUCLA2Q9P2R7 463 aaPredicted RBP31.04■■■□□ 2.56
UBFD1-206ENST00000566669 GAS2O43903 313 aaKnown RBP31.03■■■□□ 2.56
UBFD1-206ENST00000566669 GLP2RO95838 553 aa31.03■■■□□ 2.56
UBFD1-206ENST00000566669 P4HBP07237 508 aaKnown RBP31.03■■■□□ 2.56
UBFD1-206ENST00000566669 RAB27AP51159 221 aa31.03■■■□□ 2.56
UBFD1-206ENST00000566669 ERVFC1P60507 584 aa31.03■■■□□ 2.56
UBFD1-206ENST00000566669 RNF169Q8NCN4 708 aa31.03■■■□□ 2.56
UBFD1-206ENST00000566669 AIFM3Q96NN9 605 aa31.03■■■□□ 2.56
UBFD1-206ENST00000566669 TCF25Q9BQ70 676 aa31.03■■■□□ 2.56
UBFD1-206ENST00000566669 LARP6Q9BRS8 491 aaKnown RBP31.03■■■□□ 2.56
UBFD1-206ENST00000566669 ENTPD7Q9NQZ7 604 aa31.03■■■□□ 2.56
UBFD1-206ENST00000566669 PLXNA4Q9HCM2 1894 aa31.02■■■□□ 2.56
UBFD1-206ENST00000566669 HOXB8P17481 243 aaPredicted RBP31.02■■■□□ 2.56
UBFD1-206ENST00000566669 ALDH7A1P49419 539 aaKnown RBP31.02■■■□□ 2.56
UBFD1-206ENST00000566669 LRRC55Q6ZSA7 311 aa31.02■■■□□ 2.56
UBFD1-206ENST00000566669 ANO5Q75V66 913 aa31.02■■■□□ 2.56
UBFD1-206ENST00000566669 BRMS1Q9HCU9 246 aa31.02■■■□□ 2.56
UBFD1-206ENST00000566669 CYP26B1Q9NR63 512 aa31.02■■■□□ 2.56
UBFD1-206ENST00000566669 BARX2Q9UMQ3 279 aaPredicted RBP31.02■■■□□ 2.56
UBFD1-206ENST00000566669 KCNJ14Q9UNX9 436 aa31.02■■■□□ 2.56
UBFD1-206ENST00000566669 MARCH6O60337 910 aa31.01■■■□□ 2.55
UBFD1-206ENST00000566669 RFC5P40937 340 aa31.01■■■□□ 2.55
UBFD1-206ENST00000566669 PHKA2P46019 1235 aa31.01■■■□□ 2.55
UBFD1-206ENST00000566669 CLLU1OSQ5K130 101 aa31.01■■■□□ 2.55
UBFD1-206ENST00000566669 RHPN2Q8IUC4 686 aa31.01■■■□□ 2.55
UBFD1-206ENST00000566669 RNF135Q8IUD6 432 aa31.01■■■□□ 2.55
UBFD1-206ENST00000566669 SLFN12Q8IYM2 578 aa31.01■■■□□ 2.55
UBFD1-206ENST00000566669 PHF7Q9BWX1 381 aaPredicted RBP31.01■■■□□ 2.55
UBFD1-206ENST00000566669 VAV3Q9UKW4 847 aa31.01■■■□□ 2.55
UBFD1-206ENST00000566669 USP15Q9Y4E8 981 aaPredicted RBP31.01■■■□□ 2.55
UBFD1-206ENST00000566669 A0A087WZ62 844 aa31■■■□□ 2.55
UBFD1-206ENST00000566669 SLC37A4O43826 429 aa31■■■□□ 2.55
UBFD1-206ENST00000566669 BAG4O95429 457 aaKnown RBP31■■■□□ 2.55
UBFD1-206ENST00000566669 DRP2Q13474 957 aa31■■■□□ 2.55
UBFD1-206ENST00000566669 TWF2Q6IBS0 349 aaKnown RBP31■■■□□ 2.55
UBFD1-206ENST00000566669 OTUD6AQ7L8S5 288 aa31■■■□□ 2.55
UBFD1-206ENST00000566669 ZNF668Q96K58 619 aaPredicted RBP31■■■□□ 2.55
UBFD1-206ENST00000566669 FDXACB1Q9BRP7 624 aaPredicted RBP31■■■□□ 2.55
UBFD1-206ENST00000566669 HCSTQ9UBK5 93 aa31■■■□□ 2.55
UBFD1-206ENST00000566669 STK39Q9UEW8 545 aa31■■■□□ 2.55
UBFD1-206ENST00000566669 LOC730098B7Z3J9 87 aa30.99■■■□□ 2.55
UBFD1-206ENST00000566669 PER2O15055 1255 aa30.99■■■□□ 2.55
UBFD1-206ENST00000566669 CCNT1O60563 726 aaKnown RBP30.99■■■□□ 2.55
UBFD1-206ENST00000566669 ZNF623O75123 536 aa30.99■■■□□ 2.55
UBFD1-206ENST00000566669 SMC1AQ14683 1233 aaKnown RBP30.99■■■□□ 2.55
UBFD1-206ENST00000566669 CBX2Q14781 532 aaPredicted RBP30.99■■■□□ 2.55
UBFD1-206ENST00000566669 PLPP4Q5VZY2 271 aa30.99■■■□□ 2.55
UBFD1-206ENST00000566669 TMC7Q7Z402 723 aa30.99■■■□□ 2.55
UBFD1-206ENST00000566669 C4orf19Q8IY42 314 aa30.99■■■□□ 2.55
UBFD1-206ENST00000566669 SLC39A11Q8N1S5 342 aa30.99■■■□□ 2.55
UBFD1-206ENST00000566669 TPCN1Q9ULQ1 816 aa30.99■■■□□ 2.55
UBFD1-206ENST00000566669 PCDHGC5Q9Y5F6 944 aa30.99■■■□□ 2.55
UBFD1-206ENST00000566669 KCNC3Q14003 757 aa30.98■■■□□ 2.55
UBFD1-206ENST00000566669 EPHA7Q15375 998 aa30.98■■■□□ 2.55
UBFD1-206ENST00000566669 GLB1LQ6UWU2 654 aa30.98■■■□□ 2.55
UBFD1-206ENST00000566669 CATSPER4Q7RTX7 472 aa30.98■■■□□ 2.55
UBFD1-206ENST00000566669 HELQQ8TDG4 1101 aa30.98■■■□□ 2.55
UBFD1-206ENST00000566669 TCP11Q8WWU5 503 aa30.98■■■□□ 2.55
UBFD1-206ENST00000566669 PGBD4Q96DM1 585 aa30.98■■■□□ 2.55
UBFD1-206ENST00000566669 MFSD14AQ96MC6 490 aa30.98■■■□□ 2.55
UBFD1-206ENST00000566669 PIN4Q9Y237 131 aaKnown RBP30.98■■■□□ 2.55
UBFD1-206ENST00000566669 ASAP2O43150 1006 aa30.97■■■□□ 2.55
UBFD1-206ENST00000566669 FGFR4P22455 802 aa30.97■■■□□ 2.55
UBFD1-206ENST00000566669 POLGP54098 1239 aaPredicted RBP30.97■■■□□ 2.55
UBFD1-206ENST00000566669 GIT2Q14161 759 aa30.97■■■□□ 2.55
UBFD1-206ENST00000566669 PCBP1Q15365 356 aaKnown RBP eCLIP30.97■■■□□ 2.55
UBFD1-206ENST00000566669 ERICH6BQ5W0A0 696 aa30.97■■■□□ 2.55
UBFD1-206ENST00000566669 PIK3AP1Q6ZUJ8 805 aa30.97■■■□□ 2.55
UBFD1-206ENST00000566669 PSPC1Q8WXF1 523 aaKnown RBP30.97■■■□□ 2.55
UBFD1-206ENST00000566669 SUSD6Q92537 303 aa30.97■■■□□ 2.55
UBFD1-206ENST00000566669 CASP10Q92851 521 aa30.97■■■□□ 2.55
UBFD1-206ENST00000566669 TMEM169Q96HH4 297 aa30.97■■■□□ 2.55
UBFD1-206ENST00000566669 CEP170P1Q96L14 293 aa30.97■■■□□ 2.55
UBFD1-206ENST00000566669 ORC3Q9UBD5 711 aaPredicted RBP30.97■■■□□ 2.55
UBFD1-206ENST00000566669 COL4A3BPQ9Y5P4 624 aa30.97■■■□□ 2.55
UBFD1-206ENST00000566669 C5orf42Q9H799 3197 aa30.97■■■□□ 2.55
UBFD1-206ENST00000566669 EML1O00423 815 aa30.96■■■□□ 2.55
UBFD1-206ENST00000566669 SRGAP1Q7Z6B7 1085 aa30.96■■■□□ 2.55
UBFD1-206ENST00000566669 MRPL43Q8N983 215 aaKnown RBP30.96■■■□□ 2.55
UBFD1-206ENST00000566669 EDAQ92838 391 aa30.96■■■□□ 2.55
UBFD1-206ENST00000566669 NLRP4Q96MN2 994 aa30.96■■■□□ 2.55
UBFD1-206ENST00000566669 DHX33Q9H6R0 707 aaKnown RBP30.96■■■□□ 2.55
UBFD1-206ENST00000566669 ZSWIM4Q9H7M6 989 aa30.96■■■□□ 2.55
UBFD1-206ENST00000566669 FAM105AQ9NUU6 356 aa30.96■■■□□ 2.55
UBFD1-206ENST00000566669 MUTYHQ9UIF7 546 aa30.96■■■□□ 2.55
UBFD1-206ENST00000566669 TMEM150BA6NC51 233 aa30.95■■■□□ 2.55
UBFD1-206ENST00000566669 TPRNQ4KMQ1 711 aa30.95■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms