RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 ATAD5Q96QE3 1844 aa20.37■□□□□ 0.85
MSLN-207ENST00000566549 KCNK3O14649 394 aa20.37■□□□□ 0.85
MSLN-207ENST00000566549 FERP16591 822 aa20.37■□□□□ 0.85
MSLN-207ENST00000566549 FAM193AP78312 1265 aa20.37■□□□□ 0.85
MSLN-207ENST00000566549 DBR1Q9UK59 544 aaKnown RBP20.37■□□□□ 0.85
MSLN-207ENST00000566549 ADAM21Q9UKJ8 722 aa20.37■□□□□ 0.85
MSLN-207ENST00000566549 EMSYQ7Z589 1322 aa20.36■□□□□ 0.85
MSLN-207ENST00000566549 KRT13P13646 458 aa20.36■□□□□ 0.85
MSLN-207ENST00000566549 RPS12P25398 132 aaKnown RBP20.36■□□□□ 0.85
MSLN-207ENST00000566549 BACE1P56817 501 aa20.36■□□□□ 0.85
MSLN-207ENST00000566549 GHRHRQ02643 423 aa20.36■□□□□ 0.85
MSLN-207ENST00000566549 ITIH3Q06033 890 aa20.36■□□□□ 0.85
MSLN-207ENST00000566549 PPP2R5AQ15172 486 aa20.36■□□□□ 0.85
MSLN-207ENST00000566549 XKR9Q5GH70 373 aa20.36■□□□□ 0.85
MSLN-207ENST00000566549 C10orf76Q5T2E6 689 aa20.36■□□□□ 0.85
MSLN-207ENST00000566549 SNRNP48Q6IEG0 339 aaKnown RBP20.36■□□□□ 0.85
MSLN-207ENST00000566549 HAUS6Q7Z4H7 955 aa20.36■□□□□ 0.85
MSLN-207ENST00000566549 RIN2Q8WYP3 895 aaPredicted RBP20.36■□□□□ 0.85
MSLN-207ENST00000566549 STK33Q9BYT3 514 aa20.36■□□□□ 0.85
MSLN-207ENST00000566549 GPR88Q9GZN0 384 aa20.36■□□□□ 0.85
MSLN-207ENST00000566549 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.36■□□□□ 0.85
MSLN-207ENST00000566549 HPCAL4Q9UM19 191 aa20.36■□□□□ 0.85
MSLN-207ENST00000566549 GOLGA8IPA6NC78 632 aa20.36■□□□□ 0.85
MSLN-207ENST00000566549 GOLGA8JA6NMD2 632 aa20.36■□□□□ 0.85
MSLN-207ENST00000566549 H2AFZP0C0S5 128 aa20.36■□□□□ 0.85
MSLN-207ENST00000566549 CYP2C19P33261 490 aa20.36■□□□□ 0.85
MSLN-207ENST00000566549 GCLMP48507 274 aa20.36■□□□□ 0.85
MSLN-207ENST00000566549 SOX10P56693 466 aa20.36■□□□□ 0.85
MSLN-207ENST00000566549 ANGEL2Q5VTE6 544 aaKnown RBP20.36■□□□□ 0.85
MSLN-207ENST00000566549 PHLDB3Q6NSJ2 640 aa20.36■□□□□ 0.85
MSLN-207ENST00000566549 H2AFVQ71UI9 128 aa20.36■□□□□ 0.85
MSLN-207ENST00000566549 ACCSQ96QU6 501 aa20.36■□□□□ 0.85
MSLN-207ENST00000566549 STIM2Q9P246 746 aa20.36■□□□□ 0.85
MSLN-207ENST00000566549 APEX2Q9UBZ4 518 aa20.36■□□□□ 0.85
MSLN-207ENST00000566549 ABCB4P21439 1286 aa20.35■□□□□ 0.85
MSLN-207ENST00000566549 PRKG1Q13976 671 aa20.35■□□□□ 0.85
MSLN-207ENST00000566549 RPS6KA1Q15418 735 aa20.35■□□□□ 0.85
MSLN-207ENST00000566549 TAF4BQ92750 862 aa20.35■□□□□ 0.85
MSLN-207ENST00000566549 TMEM206Q9H813 350 aa20.35■□□□□ 0.85
MSLN-207ENST00000566549 PICK1Q9NRD5 415 aa20.35■□□□□ 0.85
MSLN-207ENST00000566549 TELO2Q9Y4R8 837 aa20.35■□□□□ 0.85
MSLN-207ENST00000566549 ESYT3A0FGR9 886 aa20.35■□□□□ 0.85
MSLN-207ENST00000566549 ZSCAN5CA6NGD5 496 aaPredicted RBP20.35■□□□□ 0.85
MSLN-207ENST00000566549 WDR64B1ANS9 1081 aa20.35■□□□□ 0.85
MSLN-207ENST00000566549 KCTD19Q17RG1 926 aaPredicted RBP20.35■□□□□ 0.85
MSLN-207ENST00000566549 SND1Q7KZF4 910 aaKnown RBP eCLIP20.35■□□□□ 0.853e-9■■■■□ 19.5
MSLN-207ENST00000566549 SLC9A9Q8IVB4 645 aa20.35■□□□□ 0.85
MSLN-207ENST00000566549 SCYL3Q8IZE3 742 aa20.35■□□□□ 0.85
MSLN-207ENST00000566549 ACBD3Q9H3P7 528 aa20.35■□□□□ 0.85
MSLN-207ENST00000566549 HSPBP1Q9NZL4 362 aa20.35■□□□□ 0.85
MSLN-207ENST00000566549 FER1L6Q2WGJ9 1857 aa20.35■□□□□ 0.85
MSLN-207ENST00000566549 CCDC169A6NNP5 214 aa20.34■□□□□ 0.85
MSLN-207ENST00000566549 PTPRAP18433 802 aa20.34■□□□□ 0.85
MSLN-207ENST00000566549 PSMC5P62195 406 aa20.34■□□□□ 0.85
MSLN-207ENST00000566549 PPP3CAQ08209 521 aa20.34■□□□□ 0.85
MSLN-207ENST00000566549 ZNF280CQ8ND82 737 aa20.34■□□□□ 0.85
MSLN-207ENST00000566549 OLIG1Q8TAK6 271 aa20.34■□□□□ 0.85
MSLN-207ENST00000566549 BTNL10A8MVZ5 291 aa20.34■□□□□ 0.85
MSLN-207ENST00000566549 GALCP54803 685 aa20.34■□□□□ 0.85
MSLN-207ENST00000566549 LRRC57Q8N9N7 239 aa20.34■□□□□ 0.85
MSLN-207ENST00000566549 TPCN2Q8NHX9 752 aa20.34■□□□□ 0.85
MSLN-207ENST00000566549 INPP4AQ96PE3 977 aaPredicted RBP20.34■□□□□ 0.85
MSLN-207ENST00000566549 KRT12Q99456 494 aa20.34■□□□□ 0.85
MSLN-207ENST00000566549 NENFQ9UMX5 172 aa20.34■□□□□ 0.85
MSLN-207ENST00000566549 KIF4AO95239 1232 aa20.33■□□□□ 0.85
MSLN-207ENST00000566549 VAMP7P51809 220 aa20.33■□□□□ 0.85
MSLN-207ENST00000566549 DCAF15Q66K64 600 aa20.33■□□□□ 0.85
MSLN-207ENST00000566549 C4orf19Q8IY42 314 aa20.33■□□□□ 0.85
MSLN-207ENST00000566549 PLEKHO2Q8TD55 490 aa20.33■□□□□ 0.85
MSLN-207ENST00000566549 AENQ8WTP8 325 aaKnown RBP20.33■□□□□ 0.85
MSLN-207ENST00000566549 PKNOX2Q96KN3 472 aa20.33■□□□□ 0.85
MSLN-207ENST00000566549 UBE2TQ9NPD8 197 aaPredicted RBP20.33■□□□□ 0.85
MSLN-207ENST00000566549 OSGEPQ9NPF4 335 aa20.33■□□□□ 0.85
MSLN-207ENST00000566549 ZNF541Q9H0D2 1346 aa20.33■□□□□ 0.84
MSLN-207ENST00000566549 FOXN3O00409 490 aaPredicted RBP20.33■□□□□ 0.84
MSLN-207ENST00000566549 GLI1P08151 1106 aa20.33■□□□□ 0.84
MSLN-207ENST00000566549 NR3C2P08235 984 aa20.33■□□□□ 0.84
MSLN-207ENST00000566549 LMAN1P49257 510 aa20.33■□□□□ 0.84
MSLN-207ENST00000566549 JAK3P52333 1124 aa20.33■□□□□ 0.84
MSLN-207ENST00000566549 INTS8Q75QN2 995 aaKnown RBP20.33■□□□□ 0.84
MSLN-207ENST00000566549 ANO5Q75V66 913 aa20.33■□□□□ 0.84
MSLN-207ENST00000566549 NLRX1Q86UT6 975 aa20.33■□□□□ 0.84
MSLN-207ENST00000566549 PALB2Q86YC2 1186 aa20.33■□□□□ 0.84
MSLN-207ENST00000566549 ARHGEF19Q8IW93 802 aa20.33■□□□□ 0.84
MSLN-207ENST00000566549 MSL3Q8N5Y2 521 aaKnown RBP20.33■□□□□ 0.84
MSLN-207ENST00000566549 XXYLT1Q8NBI6 393 aa20.33■□□□□ 0.84
MSLN-207ENST00000566549 SAAL1Q96ER3 474 aa20.33■□□□□ 0.84
MSLN-207ENST00000566549 MAP3K20Q9NYL2 800 aaKnown RBP20.33■□□□□ 0.84
MSLN-207ENST00000566549 TAS2R14Q9NYV8 317 aa20.33■□□□□ 0.84
MSLN-207ENST00000566549 LYPLA2O95372 231 aa20.32■□□□□ 0.84
MSLN-207ENST00000566549 DAAM2Q86T65 1068 aa20.32■□□□□ 0.84
MSLN-207ENST00000566549 KLHL7Q8IXQ5 586 aa20.32■□□□□ 0.84
MSLN-207ENST00000566549 LMO3Q8TAP4 145 aa20.32■□□□□ 0.84
MSLN-207ENST00000566549 VIPAS39Q9H9C1 493 aa20.32■□□□□ 0.84
MSLN-207ENST00000566549 GABBR1Q9UBS5 961 aa20.32■□□□□ 0.84
MSLN-207ENST00000566549 RNF14Q9UBS8 474 aa20.32■□□□□ 0.84
MSLN-207ENST00000566549 CEP104O60308 925 aa20.32■□□□□ 0.84
MSLN-207ENST00000566549 HEXIM1O94992 359 aaKnown RBP20.32■□□□□ 0.84
MSLN-207ENST00000566549 SYF2O95926 243 aaKnown RBP20.32■□□□□ 0.84
MSLN-207ENST00000566549 CCND2P30279 289 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms