RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 CENPBP07199 599 aaPredicted RBP22.58■■□□□ 1.21
CLN6-207ENST00000566347 COL9A1P20849 921 aa22.58■■□□□ 1.21
CLN6-207ENST00000566347 RFC5P40937 340 aa22.58■■□□□ 1.21
CLN6-207ENST00000566347 NDUFV1P49821 464 aa22.58■■□□□ 1.21
CLN6-207ENST00000566347 DLX2Q07687 328 aaPredicted RBP22.58■■□□□ 1.21
CLN6-207ENST00000566347 NCAPH2Q6IBW4 605 aa22.58■■□□□ 1.21
CLN6-207ENST00000566347 OTUD6AQ7L8S5 288 aa22.58■■□□□ 1.21
CLN6-207ENST00000566347 RNF169Q8NCN4 708 aa22.58■■□□□ 1.21
CLN6-207ENST00000566347 MICAL1Q8TDZ2 1067 aa22.58■■□□□ 1.21
CLN6-207ENST00000566347 RSPH1Q8WYR4 309 aa22.58■■□□□ 1.21
CLN6-207ENST00000566347 LXNQ9BS40 222 aa22.58■■□□□ 1.21
CLN6-207ENST00000566347 EPHX3Q9H6B9 360 aa22.58■■□□□ 1.21
CLN6-207ENST00000566347 HCSTQ9UBK5 93 aa22.58■■□□□ 1.21
CLN6-207ENST00000566347 LZTS1Q9Y250 596 aa22.58■■□□□ 1.21
CLN6-207ENST00000566347 FSD2A1L4K1 749 aa22.57■■□□□ 1.2
CLN6-207ENST00000566347 FAM205CA6NFA0 338 aa22.57■■□□□ 1.2
CLN6-207ENST00000566347 CSDE1O75534 798 aaKnown RBP22.57■■□□□ 1.2
CLN6-207ENST00000566347 SKIP12755 728 aa22.57■■□□□ 1.2
CLN6-207ENST00000566347 YWHABP31946 246 aaKnown RBP22.57■■□□□ 1.2
CLN6-207ENST00000566347 PPM1AP35813 382 aa22.57■■□□□ 1.2
CLN6-207ENST00000566347 NRIP1P48552 1158 aa22.57■■□□□ 1.2
CLN6-207ENST00000566347 POLGP54098 1239 aaPredicted RBP22.57■■□□□ 1.2
CLN6-207ENST00000566347 NPEPPSP55786 919 aa22.57■■□□□ 1.2
CLN6-207ENST00000566347 PLCB3Q01970 1234 aa22.57■■□□□ 1.2
CLN6-207ENST00000566347 SMAD4Q13485 552 aaKnown RBP22.57■■□□□ 1.2
CLN6-207ENST00000566347 ADGRD2Q7Z7M1 963 aa22.57■■□□□ 1.2
CLN6-207ENST00000566347 ZNF598Q86UK7 904 aaKnown RBP22.57■■□□□ 1.2
CLN6-207ENST00000566347 NLRP4Q96MN2 994 aa22.57■■□□□ 1.2
CLN6-207ENST00000566347 TRAIPQ9BWF2 469 aa22.57■■□□□ 1.2
CLN6-207ENST00000566347 DHX33Q9H6R0 707 aaKnown RBP22.57■■□□□ 1.2
CLN6-207ENST00000566347 ZSWIM4Q9H7M6 989 aa22.57■■□□□ 1.2
CLN6-207ENST00000566347 WRAP73Q9P2S5 460 aaPredicted RBP22.57■■□□□ 1.2
CLN6-207ENST00000566347 PUF60Q9UHX1 559 aaKnown RBP22.57■■□□□ 1.2
CLN6-207ENST00000566347 CD207Q9UJ71 328 aa22.57■■□□□ 1.2
CLN6-207ENST00000566347 LINC01565O15544 149 aa22.56■■□□□ 1.2
CLN6-207ENST00000566347 GAS2O43903 313 aaKnown RBP22.56■■□□□ 1.2
CLN6-207ENST00000566347 JAK2O60674 1132 aa22.56■■□□□ 1.2
CLN6-207ENST00000566347 SPIRE1Q08AE8 756 aa22.56■■□□□ 1.2
CLN6-207ENST00000566347 SMAD2Q15796 467 aaKnown RBP22.56■■□□□ 1.2
CLN6-207ENST00000566347 CLUL1Q15846 466 aa22.56■■□□□ 1.2
CLN6-207ENST00000566347 CLLU1OSQ5K130 101 aa22.56■■□□□ 1.2
CLN6-207ENST00000566347 KCNT2Q6UVM3 1135 aa22.56■■□□□ 1.2
CLN6-207ENST00000566347 LRRC55Q6ZSA7 311 aa22.56■■□□□ 1.2
CLN6-207ENST00000566347 DIS3L2Q8IYB7 885 aaKnown RBP22.56■■□□□ 1.2
CLN6-207ENST00000566347 ZNF558Q96NG5 402 aa22.56■■□□□ 1.2
CLN6-207ENST00000566347 MRPL9Q9BYD2 267 aaKnown RBP22.56■■□□□ 1.2
CLN6-207ENST00000566347 TLE6Q9H808 572 aa22.56■■□□□ 1.2
CLN6-207ENST00000566347 COL4A3BPQ9Y5P4 624 aa22.56■■□□□ 1.2
CLN6-207ENST00000566347 BTBD18B2RXH4 712 aa22.55■■□□□ 1.2
CLN6-207ENST00000566347 PI4K2BG5E9Z4 385 aa22.55■■□□□ 1.2
CLN6-207ENST00000566347 MBTPS2O43462 519 aa22.55■■□□□ 1.2
CLN6-207ENST00000566347 SEC24BO95487 1268 aa22.55■■□□□ 1.2
CLN6-207ENST00000566347 PHKA2P46019 1235 aa22.55■■□□□ 1.2
CLN6-207ENST00000566347 ZP2Q05996 745 aa22.55■■□□□ 1.2
CLN6-207ENST00000566347 CALCRLQ16602 461 aa22.55■■□□□ 1.2
CLN6-207ENST00000566347 TWF2Q6IBS0 349 aaKnown RBP22.55■■□□□ 1.2
CLN6-207ENST00000566347 CATSPER4Q7RTX7 472 aa22.55■■□□□ 1.2
CLN6-207ENST00000566347 RBM23Q86U06 439 aaKnown RBP22.55■■□□□ 1.2
CLN6-207ENST00000566347 KSR1Q8IVT5 923 aa22.55■■□□□ 1.2
CLN6-207ENST00000566347 ADHFE1Q8IWW8 467 aa22.55■■□□□ 1.2
CLN6-207ENST00000566347 PSPC1Q8WXF1 523 aaKnown RBP22.55■■□□□ 1.2
CLN6-207ENST00000566347 MRPS27Q92552 414 aaKnown RBP22.55■■□□□ 1.2
CLN6-207ENST00000566347 KHSRPQ92945 711 aaKnown RBP eCLIP22.55■■□□□ 1.28e-8■□□□□ 8.3
CLN6-207ENST00000566347 DYDC2Q96IM9 177 aa22.55■■□□□ 1.2
CLN6-207ENST00000566347 CDCA3Q99618 268 aaPredicted RBP22.55■■□□□ 1.2
CLN6-207ENST00000566347 RGL1Q9NZL6 768 aa22.55■■□□□ 1.2
CLN6-207ENST00000566347 PCDHA12Q9UN75 941 aa22.55■■□□□ 1.2
CLN6-207ENST00000566347 PIN4Q9Y237 131 aaKnown RBP22.55■■□□□ 1.2
CLN6-207ENST00000566347 ATF7P17544 494 aaPredicted RBP22.54■■□□□ 1.2
CLN6-207ENST00000566347 RAB27AP51159 221 aa22.54■■□□□ 1.2
CLN6-207ENST00000566347 KRT17Q04695 432 aa22.54■■□□□ 1.2
CLN6-207ENST00000566347 TMEM31Q5JXX7 168 aa22.54■■□□□ 1.2
CLN6-207ENST00000566347 ZNF579Q8NAF0 562 aaKnown RBP22.54■■□□□ 1.2
CLN6-207ENST00000566347 HELQQ8TDG4 1101 aa22.54■■□□□ 1.2
CLN6-207ENST00000566347 TCP11Q8WWU5 503 aa22.54■■□□□ 1.2
CLN6-207ENST00000566347 MSLNLQ96KJ4 702 aa22.54■■□□□ 1.2
CLN6-207ENST00000566347 POP1Q99575 1024 aaKnown RBP22.54■■□□□ 1.2
CLN6-207ENST00000566347 IFT122Q9HBG6 1241 aa22.54■■□□□ 1.2
CLN6-207ENST00000566347 SPG21Q9NZD8 308 aa22.54■■□□□ 1.2
CLN6-207ENST00000566347 PCDHGC5Q9Y5F6 944 aa22.54■■□□□ 1.2
CLN6-207ENST00000566347 FSCN2O14926 492 aa22.53■■□□□ 1.2
CLN6-207ENST00000566347 NEMFO60524 1076 aa22.53■■□□□ 1.2
CLN6-207ENST00000566347 EYA4O95677 639 aa22.53■■□□□ 1.2
CLN6-207ENST00000566347 ERVFC1P60507 584 aa22.53■■□□□ 1.2
CLN6-207ENST00000566347 CYP4A11Q02928 519 aa22.53■■□□□ 1.2
CLN6-207ENST00000566347 CTTNQ14247 550 aaKnown RBP22.53■■□□□ 1.2
CLN6-207ENST00000566347 XKR9Q5GH70 373 aa22.53■■□□□ 1.2
CLN6-207ENST00000566347 SRGAP1Q7Z6B7 1085 aa22.53■■□□□ 1.2
CLN6-207ENST00000566347 TPH2Q8IWU9 490 aa22.53■■□□□ 1.2
CLN6-207ENST00000566347 PRPF31Q8WWY3 499 aaKnown RBP22.53■■□□□ 1.2
CLN6-207ENST00000566347 LIMCH1Q9UPQ0 1083 aa22.53■■□□□ 1.2
CLN6-207ENST00000566347 CARNS1A5YM72 827 aa22.52■■□□□ 1.2
CLN6-207ENST00000566347 C19orf67A6NJJ6 358 aa22.52■■□□□ 1.2
CLN6-207ENST00000566347 ASAP2O43150 1006 aa22.52■■□□□ 1.2
CLN6-207ENST00000566347 ALADP13716 330 aa22.52■■□□□ 1.2
CLN6-207ENST00000566347 FOSBP53539 338 aa22.52■■□□□ 1.2
CLN6-207ENST00000566347 LAMTOR4Q0VGL1 99 aa22.52■■□□□ 1.2
CLN6-207ENST00000566347 COASYQ13057 564 aa22.52■■□□□ 1.2
CLN6-207ENST00000566347 EMC2Q15006 297 aa22.52■■□□□ 1.2
CLN6-207ENST00000566347 SAFBQ15424 915 aaKnown RBP eCLIP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms