RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 MAP3K12Q12852 859 aa11.82□□□□□ -0.52
UBFD1-205ENST00000566136 KLF1Q13351 362 aaPredicted RBP11.82□□□□□ -0.52
UBFD1-205ENST00000566136 SF1Q15637 639 aaKnown RBP11.82□□□□□ -0.52
UBFD1-205ENST00000566136 HECTD3Q5T447 861 aa11.82□□□□□ -0.52
UBFD1-205ENST00000566136 CEP57L1Q8IYX8 460 aa11.82□□□□□ -0.52
UBFD1-205ENST00000566136 TGFBRAP1Q8WUH2 860 aa11.82□□□□□ -0.52
UBFD1-205ENST00000566136 MAP4K1Q92918 833 aa11.82□□□□□ -0.52
UBFD1-205ENST00000566136 NT5C1BQ96P26 610 aa11.82□□□□□ -0.52
UBFD1-205ENST00000566136 LRRC3Q9BY71 257 aa11.82□□□□□ -0.52
UBFD1-205ENST00000566136 LMAN2LQ9H0V9 348 aa11.82□□□□□ -0.52
UBFD1-205ENST00000566136 PIH1D1Q9NWS0 290 aaKnown RBP11.82□□□□□ -0.52
UBFD1-205ENST00000566136 SRP68Q9UHB9 627 aaKnown RBP11.82□□□□□ -0.52
UBFD1-205ENST00000566136 TJP1Q07157 1748 aa11.82□□□□□ -0.52
UBFD1-205ENST00000566136 C17orf113A0A1B0GUU1 675 aa11.81□□□□□ -0.52
UBFD1-205ENST00000566136 SYCE3A1L190 88 aa11.81□□□□□ -0.52
UBFD1-205ENST00000566136 FRS3O43559 492 aa11.81□□□□□ -0.52
UBFD1-205ENST00000566136 POU2F2P09086 479 aa11.81□□□□□ -0.52
UBFD1-205ENST00000566136 FOXO4P98177 505 aa11.81□□□□□ -0.52
UBFD1-205ENST00000566136 MLLT1Q03111 559 aaPredicted RBP11.81□□□□□ -0.52
UBFD1-205ENST00000566136 SEMA5AQ13591 1074 aa11.81□□□□□ -0.52
UBFD1-205ENST00000566136 ACAP2Q15057 778 aa11.81□□□□□ -0.52
UBFD1-205ENST00000566136 LONRF2Q1L5Z9 754 aa11.81□□□□□ -0.52
UBFD1-205ENST00000566136 RRP12Q5JTH9 1297 aaKnown RBP11.81□□□□□ -0.52
UBFD1-205ENST00000566136 DSTYKQ6XUX3 929 aa11.81□□□□□ -0.52
UBFD1-205ENST00000566136 NECAB1Q8N987 351 aa11.81□□□□□ -0.52
UBFD1-205ENST00000566136 ASB2Q96Q27 587 aa11.81□□□□□ -0.52
UBFD1-205ENST00000566136 MRPL9Q9BYD2 267 aaKnown RBP11.81□□□□□ -0.52
UBFD1-205ENST00000566136 ADAM19Q9H013 955 aa11.81□□□□□ -0.52
UBFD1-205ENST00000566136 TBC1D29Q9UFV1 150 aa11.81□□□□□ -0.52
UBFD1-205ENST00000566136 KCPQ6ZWJ8 1503 aa11.81□□□□□ -0.52
UBFD1-205ENST00000566136 FKBP9O95302 570 aa11.81□□□□□ -0.52
UBFD1-205ENST00000566136 ENPP1P22413 925 aa11.81□□□□□ -0.52
UBFD1-205ENST00000566136 SKOR1P84550 965 aa11.81□□□□□ -0.52
UBFD1-205ENST00000566136 TNFAIP2Q03169 654 aa11.81□□□□□ -0.52
UBFD1-205ENST00000566136 INTS5Q6P9B9 1019 aaKnown RBP11.81□□□□□ -0.52
UBFD1-205ENST00000566136 FKBP9P1Q75LS8 142 aa11.81□□□□□ -0.52
UBFD1-205ENST00000566136 VSIG1Q86XK7 387 aa11.81□□□□□ -0.52
UBFD1-205ENST00000566136 CEP97Q8IW35 865 aa11.81□□□□□ -0.52
UBFD1-205ENST00000566136 DIS3LQ8TF46 1054 aaKnown RBP11.81□□□□□ -0.52
UBFD1-205ENST00000566136 CENPIQ92674 756 aaPredicted RBP11.81□□□□□ -0.52
UBFD1-205ENST00000566136 APEX2Q9UBZ4 518 aa11.81□□□□□ -0.52
UBFD1-205ENST00000566136 KCNMB2Q9Y691 235 aa11.81□□□□□ -0.52
UBFD1-205ENST00000566136 IKBKGQ9Y6K9 419 aa11.81□□□□□ -0.52
UBFD1-205ENST00000566136 MED23Q9ULK4 1368 aa11.8□□□□□ -0.52
UBFD1-205ENST00000566136 H7C1W4 665 aa11.8□□□□□ -0.52
UBFD1-205ENST00000566136 ATP5JP18859 108 aa11.8□□□□□ -0.52
UBFD1-205ENST00000566136 POU3F2P20265 443 aaPredicted RBP11.8□□□□□ -0.52
UBFD1-205ENST00000566136 SYT1P21579 422 aa11.8□□□□□ -0.52
UBFD1-205ENST00000566136 ST3GAL1Q11201 340 aa11.8□□□□□ -0.52
UBFD1-205ENST00000566136 PPP2R5DQ14738 602 aa11.8□□□□□ -0.52
UBFD1-205ENST00000566136 C4orf50Q6ZRC1 276 aa11.8□□□□□ -0.52
UBFD1-205ENST00000566136 DIO2Q92813 273 aa11.8□□□□□ -0.52
UBFD1-205ENST00000566136 TEKT5Q96M29 485 aa11.8□□□□□ -0.52
UBFD1-205ENST00000566136 C1orf112Q9NSG2 853 aa11.8□□□□□ -0.52
UBFD1-205ENST00000566136 KCTD5Q9NXV2 234 aa11.8□□□□□ -0.52
UBFD1-205ENST00000566136 NKIRAS2Q9NYR9 191 aa11.8□□□□□ -0.52
UBFD1-205ENST00000566136 SALL4Q9UJQ4 1053 aa11.8□□□□□ -0.52
UBFD1-205ENST00000566136 CORINQ9Y5Q5 1042 aa11.8□□□□□ -0.52
UBFD1-205ENST00000566136 CICQ96RK0 1608 aaPredicted RBP11.8□□□□□ -0.52
UBFD1-205ENST00000566136 ANKRD18BA2A2Z9 1011 aa11.8□□□□□ -0.52
UBFD1-205ENST00000566136 GRNP28799 593 aaKnown RBP11.8□□□□□ -0.52
UBFD1-205ENST00000566136 MTFR1Q15390 333 aa11.8□□□□□ -0.52
UBFD1-205ENST00000566136 ME3Q16798 604 aa11.8□□□□□ -0.52
UBFD1-205ENST00000566136 TIGD6Q17RP2 521 aa11.8□□□□□ -0.52
UBFD1-205ENST00000566136 MMEL1Q495T6 779 aa11.8□□□□□ -0.52
UBFD1-205ENST00000566136 JMJD6Q6NYC1 403 aaPredicted RBP11.8□□□□□ -0.52
UBFD1-205ENST00000566136 CAMKK1Q8N5S9 505 aa11.8□□□□□ -0.52
UBFD1-205ENST00000566136 ATG16L2Q8NAA4 619 aa11.8□□□□□ -0.52
UBFD1-205ENST00000566136 RIN2Q8WYP3 895 aaPredicted RBP11.8□□□□□ -0.52
UBFD1-205ENST00000566136 HHIPQ96QV1 700 aa11.8□□□□□ -0.52
UBFD1-205ENST00000566136 TM6SF1Q9BZW5 370 aa11.8□□□□□ -0.52
UBFD1-205ENST00000566136 UBN1Q9NPG3 1134 aa11.8□□□□□ -0.52
UBFD1-205ENST00000566136 FANCFQ9NPI8 374 aa11.8□□□□□ -0.52
UBFD1-205ENST00000566136 PPARGC1AQ9UBK2 798 aaKnown RBP11.8□□□□□ -0.52
UBFD1-205ENST00000566136 CNPY2Q9Y2B0 182 aa11.8□□□□□ -0.52
UBFD1-205ENST00000566136 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.8□□□□□ -0.52
UBFD1-205ENST00000566136 COL15A1P39059 1388 aa11.79□□□□□ -0.52
UBFD1-205ENST00000566136 UBR2Q8IWV8 1755 aa11.79□□□□□ -0.52
UBFD1-205ENST00000566136 C4AP0C0L4 1744 aa11.79□□□□□ -0.52
UBFD1-205ENST00000566136 FOXN3O00409 490 aaPredicted RBP11.79□□□□□ -0.52
UBFD1-205ENST00000566136 STX6O43752 255 aa11.79□□□□□ -0.52
UBFD1-205ENST00000566136 MT-ND3P03897 115 aa11.79□□□□□ -0.52
UBFD1-205ENST00000566136 ZSCAN22P10073 491 aaPredicted RBP11.79□□□□□ -0.52
UBFD1-205ENST00000566136 GJB2P29033 226 aa11.79□□□□□ -0.52
UBFD1-205ENST00000566136 GRIA4P48058 902 aa11.79□□□□□ -0.52
UBFD1-205ENST00000566136 SMAD4Q13485 552 aaKnown RBP11.79□□□□□ -0.52
UBFD1-205ENST00000566136 KIF22Q14807 665 aa11.79□□□□□ -0.52
UBFD1-205ENST00000566136 PPA1Q15181 289 aa11.79□□□□□ -0.52
UBFD1-205ENST00000566136 UNC5AQ6ZN44 842 aa11.79□□□□□ -0.52
UBFD1-205ENST00000566136 ZNF295-AS1Q8N0V1 137 aa11.79□□□□□ -0.52
UBFD1-205ENST00000566136 DMRT3Q9NQL9 472 aa11.79□□□□□ -0.52
UBFD1-205ENST00000566136 SPEF1Q9Y4P9 236 aa11.79□□□□□ -0.52
UBFD1-205ENST00000566136 B3GALNT1O75752 331 aa11.79□□□□□ -0.52
UBFD1-205ENST00000566136 MBD3O95983 291 aa11.79□□□□□ -0.52
UBFD1-205ENST00000566136 TAF12Q16514 161 aa11.79□□□□□ -0.52
UBFD1-205ENST00000566136 SLC22A25Q6T423 547 aa11.79□□□□□ -0.52
UBFD1-205ENST00000566136 CCBE1Q6UXH8 406 aaPredicted RBP11.79□□□□□ -0.52
UBFD1-205ENST00000566136 NCAPG2Q86XI2 1143 aa11.79□□□□□ -0.52
UBFD1-205ENST00000566136 RNF217Q8TC41 542 aa11.79□□□□□ -0.52
UBFD1-205ENST00000566136 B3GNT5Q9BYG0 378 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms