RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 PSPC1Q8WXF1 523 aaKnown RBP20.64■□□□□ 0.89
COMMD4-213ENST00000565834 SRRTQ9BXP5 876 aaKnown RBP20.64■□□□□ 0.89
COMMD4-213ENST00000565834 TRIM5Q9C035 493 aa20.64■□□□□ 0.89
COMMD4-213ENST00000565834 THAP9Q9H5L6 903 aa20.64■□□□□ 0.89
COMMD4-213ENST00000565834 TYW1Q9NV66 732 aaKnown RBP20.64■□□□□ 0.89
COMMD4-213ENST00000565834 RRN3P2A6NIE6 340 aa20.63■□□□□ 0.89
COMMD4-213ENST00000565834 H0YCG3 227 aa20.63■□□□□ 0.89
COMMD4-213ENST00000565834 HAS3O00219 553 aa20.63■□□□□ 0.89
COMMD4-213ENST00000565834 PDXKO00764 312 aa20.63■□□□□ 0.89
COMMD4-213ENST00000565834 NAMPTP43490 491 aa20.63■□□□□ 0.89
COMMD4-213ENST00000565834 DRP2Q13474 957 aa20.63■□□□□ 0.89
COMMD4-213ENST00000565834 KSR1Q8IVT5 923 aa20.63■□□□□ 0.89
COMMD4-213ENST00000565834 METTL13Q8N6R0 699 aa20.63■□□□□ 0.89
COMMD4-213ENST00000565834 PRPF31Q8WWY3 499 aaKnown RBP20.63■□□□□ 0.89
COMMD4-213ENST00000565834 HVCN1Q96D96 273 aa20.63■□□□□ 0.89
COMMD4-213ENST00000565834 KIFC3Q9BVG8 833 aa20.63■□□□□ 0.89
COMMD4-213ENST00000565834 HMX1Q9NP08 348 aaPredicted RBP20.63■□□□□ 0.89
COMMD4-213ENST00000565834 ZMYM2Q9UBW7 1377 aa20.62■□□□□ 0.89
COMMD4-213ENST00000565834 SCN10AQ9Y5Y9 1956 aa20.62■□□□□ 0.89
COMMD4-213ENST00000565834 CENPFP49454 3210 aa20.62■□□□□ 0.89
COMMD4-213ENST00000565834 CALUO43852 315 aaPredicted RBP20.62■□□□□ 0.89
COMMD4-213ENST00000565834 MSCO60682 206 aa20.62■□□□□ 0.89
COMMD4-213ENST00000565834 ADCY5O95622 1261 aa20.62■□□□□ 0.89
COMMD4-213ENST00000565834 FGFR1OPO95684 399 aaKnown RBP20.62■□□□□ 0.89
COMMD4-213ENST00000565834 SMIM10L2AP0DMW4 78 aa20.62■□□□□ 0.89
COMMD4-213ENST00000565834 SMIM10L2BP0DMW5 78 aa20.62■□□□□ 0.89
COMMD4-213ENST00000565834 ABCD1P33897 745 aa20.62■□□□□ 0.89
COMMD4-213ENST00000565834 FANCCQ00597 558 aa20.62■□□□□ 0.89
COMMD4-213ENST00000565834 MKRN4PQ13434 485 aaPredicted RBP20.62■□□□□ 0.89
COMMD4-213ENST00000565834 MXD4Q14582 209 aaPredicted RBP20.62■□□□□ 0.89
COMMD4-213ENST00000565834 EDRF1Q3B7T1 1238 aa20.62■□□□□ 0.89
COMMD4-213ENST00000565834 MTHFD1LQ6UB35 978 aa20.62■□□□□ 0.89
COMMD4-213ENST00000565834 SYCP3Q8IZU3 236 aa20.62■□□□□ 0.89
COMMD4-213ENST00000565834 ACCSQ96QU6 501 aa20.62■□□□□ 0.89
COMMD4-213ENST00000565834 MTG1Q9BT17 334 aaPredicted RBP20.62■□□□□ 0.89
COMMD4-213ENST00000565834 TMEM206Q9H813 350 aa20.62■□□□□ 0.89
COMMD4-213ENST00000565834 SUCLA2Q9P2R7 463 aaPredicted RBP20.62■□□□□ 0.89
COMMD4-213ENST00000565834 TRAF3IP3Q9Y228 551 aa20.62■□□□□ 0.89
COMMD4-213ENST00000565834 PTPN22Q9Y2R2 807 aa20.62■□□□□ 0.89
COMMD4-213ENST00000565834 NRCAMQ92823 1304 aa20.62■□□□□ 0.89
COMMD4-213ENST00000565834 SIP14410 1827 aa20.62■□□□□ 0.89
COMMD4-213ENST00000565834 FRMPD3Q5JV73 1810 aa20.62■□□□□ 0.89
COMMD4-213ENST00000565834 DENND3A2RUS2 1198 aa20.61■□□□□ 0.89
COMMD4-213ENST00000565834 LRRIQ4A6NIV6 560 aa20.61■□□□□ 0.89
COMMD4-213ENST00000565834 SERPINC1P01008 464 aa20.61■□□□□ 0.89
COMMD4-213ENST00000565834 SCP2P22307 547 aa20.61■□□□□ 0.89
COMMD4-213ENST00000565834 CLCN3P51790 818 aa20.61■□□□□ 0.89
COMMD4-213ENST00000565834 FKBP3Q00688 224 aaKnown RBP20.61■□□□□ 0.89
COMMD4-213ENST00000565834 SPAG1Q07617 926 aa20.61■□□□□ 0.89
COMMD4-213ENST00000565834 FAM114A1Q8IWE2 563 aa20.61■□□□□ 0.89
COMMD4-213ENST00000565834 DEPTORQ8TB45 409 aa20.61■□□□□ 0.89
COMMD4-213ENST00000565834 LMBR1Q8WVP7 490 aa20.61■□□□□ 0.89
COMMD4-213ENST00000565834 ZBTB10Q96DT7 871 aa20.61■□□□□ 0.89
COMMD4-213ENST00000565834 SETD4Q9NVD3 440 aa20.61■□□□□ 0.89
COMMD4-213ENST00000565834 ARHGAP28Q9P2N2 729 aa20.61■□□□□ 0.89
COMMD4-213ENST00000565834 ADGRA3Q8IWK6 1321 aa20.61■□□□□ 0.89
COMMD4-213ENST00000565834 MYCNP04198 464 aaPredicted RBP20.61■□□□□ 0.89
COMMD4-213ENST00000565834 TMOD1P28289 359 aa20.61■□□□□ 0.89
COMMD4-213ENST00000565834 CST5P28325 142 aaPredicted RBP20.61■□□□□ 0.89
COMMD4-213ENST00000565834 CAPSQ13938 189 aa20.61■□□□□ 0.89
COMMD4-213ENST00000565834 HS2ST1Q7LGA3 356 aa20.61■□□□□ 0.89
COMMD4-213ENST00000565834 KLHDC9Q8NEP7 349 aa20.61■□□□□ 0.89
COMMD4-213ENST00000565834 ANKRD20A12PQ8NF67 263 aa20.61■□□□□ 0.89
COMMD4-213ENST00000565834 GBP3Q9H0R5 595 aa20.61■□□□□ 0.89
COMMD4-213ENST00000565834 MAGEC2Q9UBF1 373 aaPredicted RBP20.61■□□□□ 0.89
COMMD4-213ENST00000565834 TBX20Q9UMR3 447 aa20.61■□□□□ 0.89
COMMD4-213ENST00000565834 TRIP12Q14669 1992 aaPredicted RBP20.6■□□□□ 0.89
COMMD4-213ENST00000565834 KCNJ18B7U540 433 aa20.6■□□□□ 0.89
COMMD4-213ENST00000565834 TGFB1I1O43294 461 aa20.6■□□□□ 0.89
COMMD4-213ENST00000565834 ZNF75DP51815 510 aa20.6■□□□□ 0.89
COMMD4-213ENST00000565834 LAMTOR4Q0VGL1 99 aa20.6■□□□□ 0.89
COMMD4-213ENST00000565834 KCNJ12Q14500 433 aa20.6■□□□□ 0.89
COMMD4-213ENST00000565834 MARCH8Q5T0T0 291 aa20.6■□□□□ 0.89
COMMD4-213ENST00000565834 CXCL17Q6UXB2 119 aa20.6■□□□□ 0.89
COMMD4-213ENST00000565834 LRRC55Q6ZSA7 311 aa20.6■□□□□ 0.89
COMMD4-213ENST00000565834 IRF2BP1Q8IU81 584 aa20.6■□□□□ 0.89
COMMD4-213ENST00000565834 LINC01465Q8N7H1 131 aa20.6■□□□□ 0.89
COMMD4-213ENST00000565834 GOLGA5Q8TBA6 731 aa20.6■□□□□ 0.89
COMMD4-213ENST00000565834 SH3TC2Q8TF17 1288 aa20.6■□□□□ 0.89
COMMD4-213ENST00000565834 EEF2KMTQ96G04 330 aa20.6■□□□□ 0.89
COMMD4-213ENST00000565834 IFNKQ9P0W0 207 aa20.6■□□□□ 0.89
COMMD4-213ENST00000565834 EXOC7Q9UPT5 735 aa20.6■□□□□ 0.89
COMMD4-213ENST00000565834 ASAP2O43150 1006 aa20.59■□□□□ 0.89
COMMD4-213ENST00000565834 EEF1GP26641 437 aaKnown RBP20.59■□□□□ 0.89
COMMD4-213ENST00000565834 TCP11X2Q5H9J9 407 aa20.59■□□□□ 0.89
COMMD4-213ENST00000565834 RNF180Q86T96 592 aa20.59■□□□□ 0.89
COMMD4-213ENST00000565834 RHPN2Q8IUC4 686 aa20.59■□□□□ 0.89
COMMD4-213ENST00000565834 CREBRFQ8IUR6 639 aa20.59■□□□□ 0.89
COMMD4-213ENST00000565834 MAP4K3Q8IVH8 894 aa20.59■□□□□ 0.89
COMMD4-213ENST00000565834 PCSK9Q8NBP7 692 aaKnown RBP20.59■□□□□ 0.89
COMMD4-213ENST00000565834 CEP63Q96MT8 703 aa20.59■□□□□ 0.89
COMMD4-213ENST00000565834 NR2F2P24468 414 aa20.58■□□□□ 0.89
COMMD4-213ENST00000565834 RPL13P26373 211 aaKnown RBP20.58■□□□□ 0.89
COMMD4-213ENST00000565834 TFDP1Q14186 410 aa20.58■□□□□ 0.89
COMMD4-213ENST00000565834 KCNA10Q16322 511 aa20.58■□□□□ 0.89
COMMD4-213ENST00000565834 NFRKBQ6P4R8 1299 aa20.58■□□□□ 0.89
COMMD4-213ENST00000565834 ZC3H3Q8IXZ2 948 aaKnown RBP20.58■□□□□ 0.89
COMMD4-213ENST00000565834 C7orf31Q8N865 590 aa20.58■□□□□ 0.89
COMMD4-213ENST00000565834 PPP1R13LQ8WUF5 828 aa20.58■□□□□ 0.89
COMMD4-213ENST00000565834 KCNN1Q92952 543 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms