RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 INTS2Q9H0H0 1204 aaKnown RBP7.88□□□□□ -1.15
SMG1-210ENST00000565224 CARD9Q9H257 536 aa7.88□□□□□ -1.15
SMG1-210ENST00000565224 DPH5Q9H2P9 285 aa7.88□□□□□ -1.15
SMG1-210ENST00000565224 IKZF4Q9H2S9 585 aa7.88□□□□□ -1.15
SMG1-210ENST00000565224 PPANQ9NQ55 473 aaKnown RBP7.88□□□□□ -1.15
SMG1-210ENST00000565224 BCCIPQ9P287 314 aaKnown RBP eCLIP7.88□□□□□ -1.15
SMG1-210ENST00000565224 SEL1LQ9UBV2 794 aa7.88□□□□□ -1.15
SMG1-210ENST00000565224 PPP1R9AQ9ULJ8 1098 aa7.88□□□□□ -1.15
SMG1-210ENST00000565224 FRMD4BQ9Y2L6 1034 aa7.88□□□□□ -1.15
SMG1-210ENST00000565224 IGSF9BQ9UPX0 1349 aa7.87□□□□□ -1.15
SMG1-210ENST00000565224 UBR3Q6ZT12 1888 aa7.87□□□□□ -1.15
SMG1-210ENST00000565224 GMNCA6NCL1 334 aa7.87□□□□□ -1.15
SMG1-210ENST00000565224 H0YHG0 523 aa7.87□□□□□ -1.15
SMG1-210ENST00000565224 TRAPPC3O43617 180 aa7.87□□□□□ -1.15
SMG1-210ENST00000565224 PPFIA2O75334 1257 aa7.87□□□□□ -1.15
SMG1-210ENST00000565224 SLITRK3O94933 977 aa7.87□□□□□ -1.15
SMG1-210ENST00000565224 CHRM1P11229 460 aaPredicted RBP7.87□□□□□ -1.15
SMG1-210ENST00000565224 ABCB4P21439 1286 aa7.87□□□□□ -1.15
SMG1-210ENST00000565224 HNRNPH1P31943 449 aaKnown RBP7.87□□□□□ -1.15
SMG1-210ENST00000565224 USP8P40818 1118 aa7.87□□□□□ -1.15
SMG1-210ENST00000565224 MYL7Q01449 175 aa7.87□□□□□ -1.15
SMG1-210ENST00000565224 PLS1Q14651 629 aa7.87□□□□□ -1.15
SMG1-210ENST00000565224 COG2Q14746 738 aa7.87□□□□□ -1.15
SMG1-210ENST00000565224 CLUL1Q15846 466 aa7.87□□□□□ -1.15
SMG1-210ENST00000565224 CBWD6Q4V339 395 aa7.87□□□□□ -1.15
SMG1-210ENST00000565224 CBWD3Q5JTY5 395 aa7.87□□□□□ -1.15
SMG1-210ENST00000565224 CBWD5Q5RIA9 395 aa7.87□□□□□ -1.15
SMG1-210ENST00000565224 DCAF12L1Q5VU92 463 aa7.87□□□□□ -1.15
SMG1-210ENST00000565224 LRCH2Q5VUJ6 765 aa7.87□□□□□ -1.15
SMG1-210ENST00000565224 SAMD1Q6SPF0 538 aaPredicted RBP7.87□□□□□ -1.15
SMG1-210ENST00000565224 OTOP1Q7RTM1 612 aa7.87□□□□□ -1.15
SMG1-210ENST00000565224 ATP8B4Q8TF62 1192 aa7.87□□□□□ -1.15
SMG1-210ENST00000565224 TRIM51Q9BSJ1 452 aa7.87□□□□□ -1.15
SMG1-210ENST00000565224 WDR18Q9BV38 432 aa7.87□□□□□ -1.15
SMG1-210ENST00000565224 AGPAT3Q9NRZ7 376 aa7.87□□□□□ -1.15
SMG1-210ENST00000565224 APEX2Q9UBZ4 518 aa7.87□□□□□ -1.15
SMG1-210ENST00000565224 NOVA2Q9UNW9 492 aaKnown RBP7.87□□□□□ -1.15
SMG1-210ENST00000565224 SIPA1L1O43166 1804 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 ANKRD62A6NC57 917 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 CHMP2AO43633 222 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 NPM3O75607 178 aaKnown RBP7.86□□□□□ -1.15
SMG1-210ENST00000565224 PSMD10O75832 226 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 PAEPP09466 180 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 TRIM49P0CI25 452 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 TRIM49CP0CI26 452 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 NPR1P16066 1061 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 TNFAIP3P21580 790 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 RFX1P22670 979 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 CYP2J2P51589 502 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 PRELPP51888 382 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 ZNF131P52739 623 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 RBM5P52756 815 aaKnown RBP eCLIP7.86□□□□□ -1.15
SMG1-210ENST00000565224 EIF3BP55884 814 aaKnown RBP7.86□□□□□ -1.15
SMG1-210ENST00000565224 DR1Q01658 176 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 PPP2R5CQ13362 524 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 PRPF4BQ13523 1007 aaKnown RBP7.86□□□□□ -1.15
SMG1-210ENST00000565224 KRT71Q3SY84 523 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 RNF187Q5TA31 235 aaPredicted RBP7.86□□□□□ -1.15
SMG1-210ENST00000565224 KCNV1Q6PIU1 500 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 ZNF720Q7Z2F6 126 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 PODNQ7Z5L7 613 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 KIAA0825Q8IV33 1275 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 KSR1Q8IVT5 923 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 TEX2Q8IWB9 1127 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 FAM178BQ8IXR5 827 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 SLC5A5Q92911 643 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 ARHGEF26Q96DR7 871 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 FIZ1Q96SL8 496 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 FMO2Q99518 471 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 TXLNGYQ9BZA5 131 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 TRIM31Q9BZY9 425 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 TMX4Q9H1E5 349 aaPredicted RBP7.86□□□□□ -1.15
SMG1-210ENST00000565224 SEPT11Q9NVA2 429 aaKnown RBP7.86□□□□□ -1.15
SMG1-210ENST00000565224 DMAC2Q9NW81 257 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 KCND2Q9NZV8 630 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 NR2E1Q9Y466 385 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 PCDHAC2Q9Y5I4 1007 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 FAM187AA6NFU0 413 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 MUTP22033 750 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 GUCY2CP25092 1073 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 TMOD1P28289 359 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 MAGOHP61326 146 aaKnown RBP7.86□□□□□ -1.15
SMG1-210ENST00000565224 IFFO1Q0D2I5 559 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 TRAF1Q13077 416 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 IFT88Q13099 833 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 DRP2Q13474 957 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 KIF22Q14807 665 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 PLCB4Q15147 1175 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 KCTD19Q17RG1 926 aaPredicted RBP7.86□□□□□ -1.15
SMG1-210ENST00000565224 SLC27A3Q5K4L6 730 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 C6orf89Q6UWU4 347 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 RHOT2Q8IXI1 618 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 MAGOHBQ96A72 148 aaKnown RBP7.86□□□□□ -1.15
SMG1-210ENST00000565224 NACC1Q96RE7 527 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 THAP2Q9H0W7 228 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 VCPKMTQ9H867 229 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 DBNDD1Q9H9R9 158 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 CNOT8Q9UFF9 292 aaKnown RBP7.86□□□□□ -1.15
SMG1-210ENST00000565224 ODF2LQ9ULJ1 636 aa7.86□□□□□ -1.15
SMG1-210ENST00000565224 PRR12Q9ULL5 1215 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms