RNA–Protein interactions for RNA: ENST00000564948.1

CX3CL1-203, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 3 BASIC

Gene CX3CL1, Length 563 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-203ENST00000564948 PUF60Q9UHX1 559 aaKnown RBP16.9■□□□□ 0.3
CX3CL1-203ENST00000564948 LINC01565O15544 149 aa16.89■□□□□ 0.29
CX3CL1-203ENST00000564948 DTNBO60941 627 aa16.89■□□□□ 0.29
CX3CL1-203ENST00000564948 SKIP12755 728 aa16.89■□□□□ 0.29
CX3CL1-203ENST00000564948 FDPSP14324 419 aaKnown RBP16.89■□□□□ 0.29
CX3CL1-203ENST00000564948 RFC5P40937 340 aa16.89■□□□□ 0.29
CX3CL1-203ENST00000564948 NEK4P51957 841 aa16.89■□□□□ 0.29
CX3CL1-203ENST00000564948 POLGP54098 1239 aaPredicted RBP16.89■□□□□ 0.29
CX3CL1-203ENST00000564948 PLCB3Q01970 1234 aa16.89■□□□□ 0.29
CX3CL1-203ENST00000564948 ZP2Q05996 745 aa16.89■□□□□ 0.29
CX3CL1-203ENST00000564948 NR5A1Q13285 461 aa16.89■□□□□ 0.29
CX3CL1-203ENST00000564948 TRIM29Q14134 588 aa16.89■□□□□ 0.29
CX3CL1-203ENST00000564948 SMAD2Q15796 467 aaKnown RBP16.89■□□□□ 0.29
CX3CL1-203ENST00000564948 NCAPH2Q6IBW4 605 aa16.89■□□□□ 0.29
CX3CL1-203ENST00000564948 RBM23Q86U06 439 aaKnown RBP16.89■□□□□ 0.29
CX3CL1-203ENST00000564948 ADHFE1Q8IWW8 467 aa16.89■□□□□ 0.29
CX3CL1-203ENST00000564948 C4orf19Q8IY42 314 aa16.89■□□□□ 0.29
CX3CL1-203ENST00000564948 RSPH1Q8WYR4 309 aa16.89■□□□□ 0.29
CX3CL1-203ENST00000564948 MRPS27Q92552 414 aaKnown RBP16.89■□□□□ 0.29
CX3CL1-203ENST00000564948 HAS1Q92839 578 aa16.89■□□□□ 0.29
CX3CL1-203ENST00000564948 KHSRPQ92945 711 aaKnown RBP eCLIP16.89■□□□□ 0.29
CX3CL1-203ENST00000564948 NLRP4Q96MN2 994 aa16.89■□□□□ 0.29
CX3CL1-203ENST00000564948 ZNF558Q96NG5 402 aa16.89■□□□□ 0.29
CX3CL1-203ENST00000564948 CDCA3Q99618 268 aaPredicted RBP16.89■□□□□ 0.29
CX3CL1-203ENST00000564948 MRPL9Q9BYD2 267 aaKnown RBP16.89■□□□□ 0.29
CX3CL1-203ENST00000564948 TLE6Q9H808 572 aa16.89■□□□□ 0.29
CX3CL1-203ENST00000564948 LZTS1Q9Y250 596 aa16.89■□□□□ 0.29
CX3CL1-203ENST00000564948 BRWD1Q9NSI6 2320 aa16.88■□□□□ 0.29
CX3CL1-203ENST00000564948 ATG2AQ2TAZ0 1938 aa16.88■□□□□ 0.29
CX3CL1-203ENST00000564948 CSDE1O75534 798 aaKnown RBP16.88■□□□□ 0.29
CX3CL1-203ENST00000564948 LARGE1O95461 756 aa16.88■□□□□ 0.29
CX3CL1-203ENST00000564948 ALADP13716 330 aa16.88■□□□□ 0.29
CX3CL1-203ENST00000564948 NPEPPSP55786 919 aa16.88■□□□□ 0.29
CX3CL1-203ENST00000564948 KRT17Q04695 432 aa16.88■□□□□ 0.29
CX3CL1-203ENST00000564948 EARS2Q5JPH6 523 aaKnown RBP16.88■□□□□ 0.29
CX3CL1-203ENST00000564948 TWF2Q6IBS0 349 aaKnown RBP16.88■□□□□ 0.29
CX3CL1-203ENST00000564948 KCNT2Q6UVM3 1135 aa16.88■□□□□ 0.29
CX3CL1-203ENST00000564948 LRRC55Q6ZSA7 311 aa16.88■□□□□ 0.29
CX3CL1-203ENST00000564948 OTUD6AQ7L8S5 288 aa16.88■□□□□ 0.29
CX3CL1-203ENST00000564948 CATSPER4Q7RTX7 472 aa16.88■□□□□ 0.29
CX3CL1-203ENST00000564948 ZNF598Q86UK7 904 aaKnown RBP16.88■□□□□ 0.29
CX3CL1-203ENST00000564948 NSUN7Q8NE18 718 aaKnown RBP16.88■□□□□ 0.29
CX3CL1-203ENST00000564948 LXNQ9BS40 222 aa16.88■□□□□ 0.29
CX3CL1-203ENST00000564948 LRFN3Q9BTN0 628 aa16.88■□□□□ 0.29
CX3CL1-203ENST00000564948 TRAIPQ9BWF2 469 aa16.88■□□□□ 0.29
CX3CL1-203ENST00000564948 ZSWIM4Q9H7M6 989 aa16.88■□□□□ 0.29
CX3CL1-203ENST00000564948 PIN4Q9Y237 131 aaKnown RBP16.88■□□□□ 0.29
CX3CL1-203ENST00000564948 PCDHGC5Q9Y5F6 944 aa16.88■□□□□ 0.29
CX3CL1-203ENST00000564948 COL4A3BPQ9Y5P4 624 aa16.88■□□□□ 0.29
CX3CL1-203ENST00000564948 FNDC1Q4ZHG4 1894 aaPredicted RBP16.88■□□□□ 0.29
CX3CL1-203ENST00000564948 WDR81Q562E7 1941 aa16.88■□□□□ 0.29
CX3CL1-203ENST00000564948 FSCN2O14926 492 aa16.87■□□□□ 0.29
CX3CL1-203ENST00000564948 GAS2O43903 313 aaKnown RBP16.87■□□□□ 0.29
CX3CL1-203ENST00000564948 GPR37L1O60883 481 aa16.87■□□□□ 0.29
CX3CL1-203ENST00000564948 SRGAP2BP0DMP2 458 aa16.87■□□□□ 0.29
CX3CL1-203ENST00000564948 YWHABP31946 246 aaKnown RBP16.87■□□□□ 0.29
CX3CL1-203ENST00000564948 PHKA2P46019 1235 aa16.87■□□□□ 0.29
CX3CL1-203ENST00000564948 CLLU1OSQ5K130 101 aa16.87■□□□□ 0.29
CX3CL1-203ENST00000564948 HELQQ8TDG4 1101 aa16.87■□□□□ 0.29
CX3CL1-203ENST00000564948 PSPC1Q8WXF1 523 aaKnown RBP16.87■□□□□ 0.29
CX3CL1-203ENST00000564948 TNFRSF25Q93038 417 aa16.87■□□□□ 0.29
CX3CL1-203ENST00000564948 MSLNLQ96KJ4 702 aa16.87■□□□□ 0.29
CX3CL1-203ENST00000564948 DHX33Q9H6R0 707 aaKnown RBP16.87■□□□□ 0.29
CX3CL1-203ENST00000564948 ENTPD7Q9NQZ7 604 aa16.87■□□□□ 0.29
CX3CL1-203ENST00000564948 NCOR1O75376 2440 aa16.86■□□□□ 0.29
CX3CL1-203ENST00000564948 CARNS1A5YM72 827 aa16.86■□□□□ 0.29
CX3CL1-203ENST00000564948 FAM205CA6NFA0 338 aa16.86■□□□□ 0.29
CX3CL1-203ENST00000564948 C19orf67A6NJJ6 358 aa16.86■□□□□ 0.29
CX3CL1-203ENST00000564948 EYA4O95677 639 aa16.86■□□□□ 0.29
CX3CL1-203ENST00000564948 ATF7P17544 494 aaPredicted RBP16.86■□□□□ 0.29
CX3CL1-203ENST00000564948 RAB27AP51159 221 aa16.86■□□□□ 0.29
CX3CL1-203ENST00000564948 ERVFC1P60507 584 aa16.86■□□□□ 0.29
CX3CL1-203ENST00000564948 COASYQ13057 564 aa16.86■□□□□ 0.29
CX3CL1-203ENST00000564948 CALCRLQ16602 461 aa16.86■□□□□ 0.29
CX3CL1-203ENST00000564948 DUSP6Q16828 381 aa16.86■□□□□ 0.29
CX3CL1-203ENST00000564948 PLPP4Q5VZY2 271 aa16.86■□□□□ 0.29
CX3CL1-203ENST00000564948 KSR1Q8IVT5 923 aa16.86■□□□□ 0.29
CX3CL1-203ENST00000564948 DIS3L2Q8IYB7 885 aaKnown RBP16.86■□□□□ 0.29
CX3CL1-203ENST00000564948 TCP11Q8WWU5 503 aa16.86■□□□□ 0.29
CX3CL1-203ENST00000564948 DYDC2Q96IM9 177 aa16.86■□□□□ 0.29
CX3CL1-203ENST00000564948 TCF25Q9BQ70 676 aa16.86■□□□□ 0.29
CX3CL1-203ENST00000564948 NGRNQ9NPE2 291 aaKnown RBP16.86■□□□□ 0.29
CX3CL1-203ENST00000564948 SPG21Q9NZD8 308 aa16.86■□□□□ 0.29
CX3CL1-203ENST00000564948 RGL1Q9NZL6 768 aa16.86■□□□□ 0.29
CX3CL1-203ENST00000564948 CLEC1BQ9P126 229 aa16.86■□□□□ 0.29
CX3CL1-203ENST00000564948 WRAP73Q9P2S5 460 aaPredicted RBP16.86■□□□□ 0.29
CX3CL1-203ENST00000564948 BTBD18B2RXH4 712 aa16.85■□□□□ 0.29
CX3CL1-203ENST00000564948 PER2O15055 1255 aa16.85■□□□□ 0.29
CX3CL1-203ENST00000564948 DCXO43602 365 aa16.85■□□□□ 0.29
CX3CL1-203ENST00000564948 JAK2O60674 1132 aa16.85■□□□□ 0.29
CX3CL1-203ENST00000564948 GLP2RO95838 553 aa16.85■□□□□ 0.29
CX3CL1-203ENST00000564948 FOSBP53539 338 aa16.85■□□□□ 0.29
CX3CL1-203ENST00000564948 CYP4A11Q02928 519 aa16.85■□□□□ 0.29
CX3CL1-203ENST00000564948 SPIRE1Q08AE8 756 aa16.85■□□□□ 0.29
CX3CL1-203ENST00000564948 CTTNQ14247 550 aaKnown RBP16.85■□□□□ 0.29
CX3CL1-203ENST00000564948 EMC2Q15006 297 aa16.85■□□□□ 0.29
CX3CL1-203ENST00000564948 XKR9Q5GH70 373 aa16.85■□□□□ 0.29
CX3CL1-203ENST00000564948 GLB1LQ6UWU2 654 aa16.85■□□□□ 0.29
CX3CL1-203ENST00000564948 SRGAP1Q7Z6B7 1085 aa16.85■□□□□ 0.29
CX3CL1-203ENST00000564948 SMRP1Q8NCR6 262 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms