RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 SIX2Q9NPC8 291 aa22.15■■□□□ 1.14
MAP1LC3B-206ENST00000564844 USP40Q9NVE5 1235 aa22.15■■□□□ 1.14
MAP1LC3B-206ENST00000564844 CTTNBP2NLQ9P2B4 639 aa22.15■■□□□ 1.14
MAP1LC3B-206ENST00000564844 DDX3YO15523 660 aaKnown RBP22.15■■□□□ 1.14
MAP1LC3B-206ENST00000564844 AKR1B1P15121 316 aa22.15■■□□□ 1.14
MAP1LC3B-206ENST00000564844 FAM47EQ6ZV65 393 aa22.15■■□□□ 1.14
MAP1LC3B-206ENST00000564844 ARMC9Q7Z3E5 817 aa22.15■■□□□ 1.14
MAP1LC3B-206ENST00000564844 CATSPER3Q86XQ3 398 aa22.15■■□□□ 1.14
MAP1LC3B-206ENST00000564844 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.15■■□□□ 1.14
MAP1LC3B-206ENST00000564844 BHMT2Q9H2M3 363 aa22.15■■□□□ 1.14
MAP1LC3B-206ENST00000564844 DHX36Q9H2U1 1008 aaKnown RBP22.15■■□□□ 1.14
MAP1LC3B-206ENST00000564844 DNAJC12Q9UKB3 198 aa22.15■■□□□ 1.14
MAP1LC3B-206ENST00000564844 SRRM3A6NNA2 597 aaPredicted RBP22.15■■□□□ 1.14
MAP1LC3B-206ENST00000564844 KIAA0391O15091 583 aaKnown RBP22.15■■□□□ 1.14
MAP1LC3B-206ENST00000564844 NMT1P30419 496 aaKnown RBP22.15■■□□□ 1.14
MAP1LC3B-206ENST00000564844 PTENP60484 403 aa22.15■■□□□ 1.14
MAP1LC3B-206ENST00000564844 TTC27Q6P3X3 843 aa22.15■■□□□ 1.14
MAP1LC3B-206ENST00000564844 PIGWQ7Z7B1 504 aa22.15■■□□□ 1.14
MAP1LC3B-206ENST00000564844 SYCE1Q8N0S2 351 aa22.15■■□□□ 1.14
MAP1LC3B-206ENST00000564844 SLC35C1Q96A29 364 aa22.15■■□□□ 1.14
MAP1LC3B-206ENST00000564844 ZNF570Q96NI8 536 aa22.15■■□□□ 1.14
MAP1LC3B-206ENST00000564844 MXD3Q9BW11 206 aa22.15■■□□□ 1.14
MAP1LC3B-206ENST00000564844 SLC12A4Q9UP95 1085 aa22.15■■□□□ 1.14
MAP1LC3B-206ENST00000564844 C15orf41Q9Y2V0 281 aa22.15■■□□□ 1.14
MAP1LC3B-206ENST00000564844 EME2A4GXA9 379 aaPredicted RBP22.14■■□□□ 1.14
MAP1LC3B-206ENST00000564844 GNPATO15228 680 aa22.14■■□□□ 1.14
MAP1LC3B-206ENST00000564844 NCALDP61601 193 aa22.14■■□□□ 1.14
MAP1LC3B-206ENST00000564844 TBC1D10BQ4KMP7 808 aaPredicted RBP22.14■■□□□ 1.14
MAP1LC3B-206ENST00000564844 RGL1Q9NZL6 768 aa22.14■■□□□ 1.14
MAP1LC3B-206ENST00000564844 RARAP10276 462 aa22.14■■□□□ 1.13
MAP1LC3B-206ENST00000564844 NQO1P15559 274 aaKnown RBP22.14■■□□□ 1.13
MAP1LC3B-206ENST00000564844 TNFAIP3P21580 790 aa22.14■■□□□ 1.13
MAP1LC3B-206ENST00000564844 BZW1Q7L1Q6 419 aaKnown RBP22.14■■□□□ 1.13
MAP1LC3B-206ENST00000564844 PHLDB2Q86SQ0 1253 aa22.14■■□□□ 1.13
MAP1LC3B-206ENST00000564844 C3orf20Q8ND61 904 aa22.14■■□□□ 1.13
MAP1LC3B-206ENST00000564844 SLC20A1Q8WUM9 679 aa22.14■■□□□ 1.13
MAP1LC3B-206ENST00000564844 YIPF3Q9GZM5 350 aa22.14■■□□□ 1.13
MAP1LC3B-206ENST00000564844 ALG6Q9Y672 507 aa22.14■■□□□ 1.13
MAP1LC3B-206ENST00000564844 BZW2Q9Y6E2 419 aaKnown RBP22.14■■□□□ 1.13
MAP1LC3B-206ENST00000564844 EIF3BP55884 814 aaKnown RBP22.13■■□□□ 1.13
MAP1LC3B-206ENST00000564844 SLFN11Q7Z7L1 901 aa22.13■■□□□ 1.13
MAP1LC3B-206ENST00000564844 LINC00116Q8NCU8 138 aa22.13■■□□□ 1.13
MAP1LC3B-206ENST00000564844 PLCD4Q9BRC7 762 aa22.13■■□□□ 1.13
MAP1LC3B-206ENST00000564844 RUSC1Q9BVN2 902 aa22.13■■□□□ 1.13
MAP1LC3B-206ENST00000564844 ANKRD36CQ5JPF3 1778 aa22.13■■□□□ 1.13
MAP1LC3B-206ENST00000564844 RIMBP2O15034 1052 aa22.13■■□□□ 1.13
MAP1LC3B-206ENST00000564844 GHRP10912 638 aa22.13■■□□□ 1.13
MAP1LC3B-206ENST00000564844 GIT2Q14161 759 aa22.13■■□□□ 1.13
MAP1LC3B-206ENST00000564844 C10orf76Q5T2E6 689 aa22.13■■□□□ 1.13
MAP1LC3B-206ENST00000564844 FAM118BQ9BPY3 351 aa22.13■■□□□ 1.13
MAP1LC3B-206ENST00000564844 RIOX1Q9H6W3 641 aa22.13■■□□□ 1.13
MAP1LC3B-206ENST00000564844 EP400Q96L91 3159 aa22.13■■□□□ 1.13
MAP1LC3B-206ENST00000564844 CHMP2AO43633 222 aa22.12■■□□□ 1.13
MAP1LC3B-206ENST00000564844 RTN2O75298 545 aa22.12■■□□□ 1.13
MAP1LC3B-206ENST00000564844 MAPK7Q13164 816 aa22.12■■□□□ 1.13
MAP1LC3B-206ENST00000564844 SHROOM1Q2M3G4 852 aaPredicted RBP22.12■■□□□ 1.13
MAP1LC3B-206ENST00000564844 EXOC3L1Q86VI1 746 aa22.12■■□□□ 1.13
MAP1LC3B-206ENST00000564844 MRRFQ96E11 262 aaKnown RBP22.12■■□□□ 1.13
MAP1LC3B-206ENST00000564844 NT5C3AQ9H0P0 336 aa22.12■■□□□ 1.13
MAP1LC3B-206ENST00000564844 SHANK3Q9BYB0 1731 aa22.12■■□□□ 1.13
MAP1LC3B-206ENST00000564844 TMEM120BA0PK00 339 aa22.12■■□□□ 1.13
MAP1LC3B-206ENST00000564844 CCDC137Q6PK04 289 aaKnown RBP22.12■■□□□ 1.13
MAP1LC3B-206ENST00000564844 CYP2W1Q8TAV3 490 aa22.12■■□□□ 1.13
MAP1LC3B-206ENST00000564844 ITGB4P16144 1822 aa22.12■■□□□ 1.13
MAP1LC3B-206ENST00000564844 CES2O00748 559 aa22.12■■□□□ 1.13
MAP1LC3B-206ENST00000564844 SNX3O60493 162 aa22.12■■□□□ 1.13
MAP1LC3B-206ENST00000564844 AUHQ13825 339 aaKnown RBP22.12■■□□□ 1.13
MAP1LC3B-206ENST00000564844 CNGA2Q16280 664 aa22.12■■□□□ 1.13
MAP1LC3B-206ENST00000564844 NSMFQ6X4W1 530 aa22.12■■□□□ 1.13
MAP1LC3B-206ENST00000564844 TXLNGYQ9BZA5 131 aa22.12■■□□□ 1.13
MAP1LC3B-206ENST00000564844 GRHL1Q9NZI5 618 aa22.12■■□□□ 1.13
MAP1LC3B-206ENST00000564844 USH1GQ495M9 461 aa22.11■■□□□ 1.13
MAP1LC3B-206ENST00000564844 PRELID2Q8N945 189 aa22.11■■□□□ 1.13
MAP1LC3B-206ENST00000564844 ARHGEF2Q92974 986 aaKnown RBP22.11■■□□□ 1.13
MAP1LC3B-206ENST00000564844 SLC12A3P55017 1021 aa22.11■■□□□ 1.13
MAP1LC3B-206ENST00000564844 CBWD6Q4V339 395 aa22.11■■□□□ 1.13
MAP1LC3B-206ENST00000564844 CBWD3Q5JTY5 395 aa22.11■■□□□ 1.13
MAP1LC3B-206ENST00000564844 CBWD5Q5RIA9 395 aa22.11■■□□□ 1.13
MAP1LC3B-206ENST00000564844 RFFLQ8WZ73 363 aa22.11■■□□□ 1.13
MAP1LC3B-206ENST00000564844 RMDN2Q96LZ7 410 aa22.11■■□□□ 1.13
MAP1LC3B-206ENST00000564844 H0Y3Z8 333 aa22.1■■□□□ 1.13
MAP1LC3B-206ENST00000564844 ASAP2O43150 1006 aa22.1■■□□□ 1.13
MAP1LC3B-206ENST00000564844 C16orf86Q6ZW13 317 aa22.1■■□□□ 1.13
MAP1LC3B-206ENST00000564844 AMIGO3Q86WK7 504 aa22.1■■□□□ 1.13
MAP1LC3B-206ENST00000564844 FITM2Q8N6M3 262 aa22.1■■□□□ 1.13
MAP1LC3B-206ENST00000564844 EIF1ADQ8N9N8 165 aaKnown RBP22.1■■□□□ 1.13
MAP1LC3B-206ENST00000564844 C1orf54Q8WWF1 131 aa22.1■■□□□ 1.13
MAP1LC3B-206ENST00000564844 ZNF287Q9HBT7 754 aa22.1■■□□□ 1.13
MAP1LC3B-206ENST00000564844 DLEC1Q9Y238 1755 aa22.1■■□□□ 1.13
MAP1LC3B-206ENST00000564844 IKQ13123 557 aaPredicted RBP22.1■■□□□ 1.13
MAP1LC3B-206ENST00000564844 CTTNQ14247 550 aaKnown RBP22.1■■□□□ 1.13
MAP1LC3B-206ENST00000564844 FRMD5Q7Z6J6 570 aa22.1■■□□□ 1.13
MAP1LC3B-206ENST00000564844 DNM3Q9UQ16 869 aa22.1■■□□□ 1.13
MAP1LC3B-206ENST00000564844 BTNL10A8MVZ5 291 aa22.1■■□□□ 1.13
MAP1LC3B-206ENST00000564844 MARSP56192 900 aaKnown RBP22.1■■□□□ 1.13
MAP1LC3B-206ENST00000564844 FMNL3Q8IVF7 1028 aa22.1■■□□□ 1.13
MAP1LC3B-206ENST00000564844 CRAMP1Q96RY5 1269 aa22.1■■□□□ 1.13
MAP1LC3B-206ENST00000564844 RTFDC1Q9BY42 306 aaPredicted RBP22.1■■□□□ 1.13
MAP1LC3B-206ENST00000564844 NOP53Q9NZM5 478 aaKnown RBP22.1■■□□□ 1.13
MAP1LC3B-206ENST00000564844 BHMG1C9JSJ3 638 aaPredicted RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms