RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 DACH1Q9UI36 760 aa14.26□□□□□ -0.13
SPG7-209ENST00000564047 ZMYND8Q9ULU4 1186 aaPredicted RBP14.26□□□□□ -0.13
SPG7-209ENST00000564047 PCDHA2Q9Y5H9 948 aa14.26□□□□□ -0.13
SPG7-209ENST00000564047 MYH9P35579 1960 aaKnown RBP14.25□□□□□ -0.13
SPG7-209ENST00000564047 A0A1W2PQ45 241 aaPredicted RBP14.25□□□□□ -0.13
SPG7-209ENST00000564047 A0A1W2PQY0 241 aa14.25□□□□□ -0.13
SPG7-209ENST00000564047 ASAP2O43150 1006 aa14.25□□□□□ -0.13
SPG7-209ENST00000564047 CAVIN2O95810 425 aa14.25□□□□□ -0.13
SPG7-209ENST00000564047 TMOD1P28289 359 aa14.25□□□□□ -0.13
SPG7-209ENST00000564047 MKRN4PQ13434 485 aaPredicted RBP14.25□□□□□ -0.13
SPG7-209ENST00000564047 PPP2R5AQ15172 486 aa14.25□□□□□ -0.13
SPG7-209ENST00000564047 DPCR1Q3MIW9 517 aa14.25□□□□□ -0.13
SPG7-209ENST00000564047 CT47A1Q5JQC4 288 aaPredicted RBP14.25□□□□□ -0.13
SPG7-209ENST00000564047 FAM178BQ8IXR5 827 aa14.25□□□□□ -0.13
SPG7-209ENST00000564047 LRRC71Q8N4P6 559 aa14.25□□□□□ -0.13
SPG7-209ENST00000564047 METTL13Q8N6R0 699 aa14.25□□□□□ -0.13
SPG7-209ENST00000564047 KIAA0895Q8NCT3 520 aa14.25□□□□□ -0.13
SPG7-209ENST00000564047 SPIRE2Q8WWL2 714 aa14.25□□□□□ -0.13
SPG7-209ENST00000564047 PSPC1Q8WXF1 523 aaKnown RBP14.25□□□□□ -0.13
SPG7-209ENST00000564047 ANP32BQ92688 251 aaKnown RBP14.25□□□□□ -0.13
SPG7-209ENST00000564047 HPS3Q969F9 1004 aa14.25□□□□□ -0.13
SPG7-209ENST00000564047 IFT74Q96LB3 600 aa14.25□□□□□ -0.13
SPG7-209ENST00000564047 PPP1R9BQ96SB3 815 aa14.25□□□□□ -0.13
SPG7-209ENST00000564047 FIZ1Q96SL8 496 aa14.25□□□□□ -0.13
SPG7-209ENST00000564047 SEZ6LQ9BYH1 1024 aa14.25□□□□□ -0.13
SPG7-209ENST00000564047 TSPY26PQ9H489 355 aa14.25□□□□□ -0.13
SPG7-209ENST00000564047 SUGCTQ9HAC7 445 aa14.25□□□□□ -0.13
SPG7-209ENST00000564047 SLC39A2Q9NP94 309 aa14.25□□□□□ -0.13
SPG7-209ENST00000564047 GDAQ9Y2T3 454 aa14.25□□□□□ -0.13
SPG7-209ENST00000564047 MUC3AQ02505 3323 aa14.25□□□□□ -0.13
SPG7-209ENST00000564047 ARID2Q68CP9 1835 aa14.25□□□□□ -0.13
SPG7-209ENST00000564047 GRIN2DO15399 1336 aa14.24□□□□□ -0.13
SPG7-209ENST00000564047 SMIM35A0A1B0GVV1 85 aa14.24□□□□□ -0.13
SPG7-209ENST00000564047 SCP2P22307 547 aa14.24□□□□□ -0.13
SPG7-209ENST00000564047 GLRA2P23416 452 aa14.24□□□□□ -0.13
SPG7-209ENST00000564047 NAMPTP43490 491 aa14.24□□□□□ -0.13
SPG7-209ENST00000564047 NPTX2P47972 431 aa14.24□□□□□ -0.13
SPG7-209ENST00000564047 SMTNP53814 917 aa14.24□□□□□ -0.13
SPG7-209ENST00000564047 NCKAP1LP55160 1127 aa14.24□□□□□ -0.13
SPG7-209ENST00000564047 PEX3P56589 373 aa14.24□□□□□ -0.13
SPG7-209ENST00000564047 DMP1Q13316 513 aaPredicted RBP14.24□□□□□ -0.13
SPG7-209ENST00000564047 DRP2Q13474 957 aa14.24□□□□□ -0.13
SPG7-209ENST00000564047 STIM1Q13586 685 aa14.24□□□□□ -0.13
SPG7-209ENST00000564047 ITGA7Q13683 1181 aa14.24□□□□□ -0.13
SPG7-209ENST00000564047 ALCAMQ13740 583 aa14.24□□□□□ -0.13
SPG7-209ENST00000564047 HIC1Q14526 733 aa14.24□□□□□ -0.13
SPG7-209ENST00000564047 MXD4Q14582 209 aaPredicted RBP14.24□□□□□ -0.13
SPG7-209ENST00000564047 STXBP4Q6ZWJ1 553 aa14.24□□□□□ -0.13
SPG7-209ENST00000564047 ZNF720Q7Z2F6 126 aa14.24□□□□□ -0.13
SPG7-209ENST00000564047 GUF1Q8N442 669 aaKnown RBP14.24□□□□□ -0.13
SPG7-209ENST00000564047 ANKLE1Q8NAG6 615 aa14.24□□□□□ -0.13
SPG7-209ENST00000564047 ASAP3Q8TDY4 903 aa14.24□□□□□ -0.13
SPG7-209ENST00000564047 KCNN1Q92952 543 aa14.24□□□□□ -0.13
SPG7-209ENST00000564047 VTI1AQ96AJ9 217 aa14.24□□□□□ -0.13
SPG7-209ENST00000564047 ST6GALNAC4Q9H4F1 302 aa14.24□□□□□ -0.13
SPG7-209ENST00000564047 MRPL44Q9H9J2 332 aaKnown RBP14.24□□□□□ -0.13
SPG7-209ENST00000564047 STARD7Q9NQZ5 370 aa14.24□□□□□ -0.13
SPG7-209ENST00000564047 TBC1D7Q9P0N9 293 aa14.24□□□□□ -0.13
SPG7-209ENST00000564047 SUCLA2Q9P2R7 463 aaPredicted RBP14.24□□□□□ -0.13
SPG7-209ENST00000564047 A0A0U1RQG5 324 aaPredicted RBP14.23□□□□□ -0.13
SPG7-209ENST00000564047 PPP1R3GB7ZBB8 358 aa14.23□□□□□ -0.13
SPG7-209ENST00000564047 H0YCG3 227 aa14.23□□□□□ -0.13
SPG7-209ENST00000564047 TREHO43280 583 aa14.23□□□□□ -0.13
SPG7-209ENST00000564047 KIF20AO95235 890 aa14.23□□□□□ -0.13
SPG7-209ENST00000564047 CYP2C9P11712 490 aa14.23□□□□□ -0.13
SPG7-209ENST00000564047 ABCD1P33897 745 aa14.23□□□□□ -0.13
SPG7-209ENST00000564047 PRCPP42785 496 aa14.23□□□□□ -0.13
SPG7-209ENST00000564047 MAGEA10P43363 369 aaPredicted RBP14.23□□□□□ -0.13
SPG7-209ENST00000564047 CLCN3P51790 818 aa14.23□□□□□ -0.13
SPG7-209ENST00000564047 ANO6Q4KMQ2 910 aa14.23□□□□□ -0.13
SPG7-209ENST00000564047 FAM47CQ5HY64 1035 aa14.23□□□□□ -0.13
SPG7-209ENST00000564047 EPM2AIP1Q7L775 607 aaPredicted RBP14.23□□□□□ -0.13
SPG7-209ENST00000564047 SMYD4Q8IYR2 804 aaPredicted RBP14.23□□□□□ -0.13
SPG7-209ENST00000564047 ADSSL1Q8N142 457 aa14.23□□□□□ -0.13
SPG7-209ENST00000564047 SLC43A3Q8NBI5 491 aa14.23□□□□□ -0.13
SPG7-209ENST00000564047 DIS3LQ8TF46 1054 aaKnown RBP14.23□□□□□ -0.13
SPG7-209ENST00000564047 PPP1R13LQ8WUF5 828 aa14.23□□□□□ -0.13
SPG7-209ENST00000564047 PRPF31Q8WWY3 499 aaKnown RBP14.23□□□□□ -0.13
SPG7-209ENST00000564047 BSNDQ8WZ55 320 aa14.23□□□□□ -0.13
SPG7-209ENST00000564047 ZBTB10Q96DT7 871 aa14.23□□□□□ -0.13
SPG7-209ENST00000564047 MAP7D2Q96T17 732 aa14.23□□□□□ -0.13
SPG7-209ENST00000564047 STRA6Q9BX79 667 aa14.23□□□□□ -0.13
SPG7-209ENST00000564047 UBE2OQ9C0C9 1292 aaKnown RBP14.23□□□□□ -0.13
SPG7-209ENST00000564047 NAT10Q9H0A0 1025 aaKnown RBP14.23□□□□□ -0.13
SPG7-209ENST00000564047 DNAJC25Q9H1X3 360 aa14.23□□□□□ -0.13
SPG7-209ENST00000564047 KMT5AQ9NQR1 393 aa14.23□□□□□ -0.13
SPG7-209ENST00000564047 PCDHB13Q9Y5F0 798 aa14.23□□□□□ -0.13
SPG7-209ENST00000564047 FRMPD3Q5JV73 1810 aa14.22□□□□□ -0.13
SPG7-209ENST00000564047 UBE4BO95155 1302 aa14.22□□□□□ -0.13
SPG7-209ENST00000564047 SCN10AQ9Y5Y9 1956 aa14.22□□□□□ -0.13
SPG7-209ENST00000564047 CCDC169A6NNP5 214 aa14.22□□□□□ -0.13
SPG7-209ENST00000564047 EIF3DO15371 548 aaKnown RBP eCLIP14.22□□□□□ -0.13
SPG7-209ENST00000564047 GCNT3O95395 438 aa14.22□□□□□ -0.13
SPG7-209ENST00000564047 RPLP2P05387 115 aaKnown RBP14.22□□□□□ -0.13
SPG7-209ENST00000564047 CD44P16070 742 aaKnown RBP14.22□□□□□ -0.13
SPG7-209ENST00000564047 ERCC5P28715 1186 aaPredicted RBP14.22□□□□□ -0.13
SPG7-209ENST00000564047 NMT1P30419 496 aaKnown RBP14.22□□□□□ -0.13
SPG7-209ENST00000564047 ZNF200P98182 395 aaPredicted RBP14.22□□□□□ -0.13
SPG7-209ENST00000564047 CDC42EP1Q00587 391 aa14.22□□□□□ -0.13
SPG7-209ENST00000564047 POU5F1BQ06416 359 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms