RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 COL20A1Q9P218 1284 aa21.73■■□□□ 1.07
MSLN-205ENST00000563941 RRP15Q9Y3B9 282 aaKnown RBP21.73■■□□□ 1.07
MSLN-205ENST00000563941 RPTORQ8N122 1335 aa21.72■■□□□ 1.07
MSLN-205ENST00000563941 TMEM253P0C7T8 217 aa21.72■■□□□ 1.07
MSLN-205ENST00000563941 CCDC172P0C7W6 258 aa21.72■■□□□ 1.07
MSLN-205ENST00000563941 FKBP1CQ5VVH2 108 aa21.72■■□□□ 1.07
MSLN-205ENST00000563941 FMNL3Q8IVF7 1028 aa21.72■■□□□ 1.07
MSLN-205ENST00000563941 PIK3R5Q8WYR1 880 aa21.72■■□□□ 1.07
MSLN-205ENST00000563941 RFFLQ8WZ73 363 aa21.72■■□□□ 1.07
MSLN-205ENST00000563941 HOOK2Q96ED9 719 aa21.72■■□□□ 1.07
MSLN-205ENST00000563941 HES6Q96HZ4 224 aa21.72■■□□□ 1.07
MSLN-205ENST00000563941 CAPS2Q9BXY5 557 aa21.72■■□□□ 1.07
MSLN-205ENST00000563941 ZNF536O15090 1300 aa21.71■■□□□ 1.07
MSLN-205ENST00000563941 KRT14P02533 472 aa21.71■■□□□ 1.07
MSLN-205ENST00000563941 INPP5BP32019 993 aa21.71■■□□□ 1.07
MSLN-205ENST00000563941 IRAK1P51617 712 aa21.71■■□□□ 1.07
MSLN-205ENST00000563941 IRX5P78411 483 aaPredicted RBP21.71■■□□□ 1.07
MSLN-205ENST00000563941 MYBPC2Q14324 1141 aa21.71■■□□□ 1.07
MSLN-205ENST00000563941 IL31RAQ8NI17 732 aa21.71■■□□□ 1.07
MSLN-205ENST00000563941 SLC35G2Q8TBE7 412 aa21.71■■□□□ 1.07
MSLN-205ENST00000563941 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.71■■□□□ 1.07
MSLN-205ENST00000563941 RGS17Q9UGC6 210 aaPredicted RBP21.71■■□□□ 1.07
MSLN-205ENST00000563941 RSPH14Q9UHP6 348 aa21.71■■□□□ 1.07
MSLN-205ENST00000563941 DAAM1Q9Y4D1 1078 aa21.71■■□□□ 1.07
MSLN-205ENST00000563941 ZNF233A6NK53 670 aa21.71■■□□□ 1.07
MSLN-205ENST00000563941 KRIT1O00522 736 aa21.71■■□□□ 1.07
MSLN-205ENST00000563941 NFIBO00712 420 aa21.71■■□□□ 1.07
MSLN-205ENST00000563941 ARHGAP44Q17R89 818 aa21.71■■□□□ 1.07
MSLN-205ENST00000563941 EIF1ADQ8N9N8 165 aaKnown RBP21.71■■□□□ 1.07
MSLN-205ENST00000563941 CTNNBL1Q8WYA6 563 aaPredicted RBP21.71■■□□□ 1.07
MSLN-205ENST00000563941 ZNF277Q9NRM2 450 aaPredicted RBP21.71■■□□□ 1.07
MSLN-205ENST00000563941 LARSQ9P2J5 1176 aaKnown RBP21.71■■□□□ 1.07
MSLN-205ENST00000563941 AMFRQ9UKV5 643 aa21.71■■□□□ 1.07
MSLN-205ENST00000563941 IGSF9BQ9UPX0 1349 aa21.7■■□□□ 1.06
MSLN-205ENST00000563941 CCDC188H7C350 402 aa21.7■■□□□ 1.06
MSLN-205ENST00000563941 SART1O43290 800 aaKnown RBP21.7■■□□□ 1.06
MSLN-205ENST00000563941 BUB1BO60566 1050 aaPredicted RBP21.7■■□□□ 1.06
MSLN-205ENST00000563941 P4HBP07237 508 aaKnown RBP21.7■■□□□ 1.06
MSLN-205ENST00000563941 KRT13P13646 458 aa21.7■■□□□ 1.06
MSLN-205ENST00000563941 ABCB4P21439 1286 aa21.7■■□□□ 1.06
MSLN-205ENST00000563941 HLTFQ14527 1009 aaKnown RBP eCLIP21.7■■□□□ 1.06
MSLN-205ENST00000563941 TNIP1Q15025 636 aa21.7■■□□□ 1.06
MSLN-205ENST00000563941 PHLDB3Q6NSJ2 640 aa21.7■■□□□ 1.06
MSLN-205ENST00000563941 FAM83AQ86UY5 434 aa21.7■■□□□ 1.06
MSLN-205ENST00000563941 LMO3Q8TAP4 145 aa21.7■■□□□ 1.06
MSLN-205ENST00000563941 CAMKK2Q96RR4 588 aa21.7■■□□□ 1.06
MSLN-205ENST00000563941 DDX47Q9H0S4 455 aaKnown RBP21.7■■□□□ 1.06
MSLN-205ENST00000563941 ZHX2Q9Y6X8 837 aa21.7■■□□□ 1.06
MSLN-205ENST00000563941 MYO1CO00159 1063 aa21.7■■□□□ 1.06
MSLN-205ENST00000563941 DHX15O43143 795 aaKnown RBP21.7■■□□□ 1.06
MSLN-205ENST00000563941 ASNSP08243 561 aa21.7■■□□□ 1.06
MSLN-205ENST00000563941 TNFAIP3P21580 790 aa21.7■■□□□ 1.06
MSLN-205ENST00000563941 HSPA9P38646 679 aaKnown RBP21.7■■□□□ 1.06
MSLN-205ENST00000563941 CUL1Q13616 776 aa21.7■■□□□ 1.06
MSLN-205ENST00000563941 RTKN2Q8IZC4 609 aa21.7■■□□□ 1.06
MSLN-205ENST00000563941 CLEC4DQ8WXI8 215 aa21.7■■□□□ 1.06
MSLN-205ENST00000563941 PSMD1Q99460 953 aa21.7■■□□□ 1.06
MSLN-205ENST00000563941 ZNF341Q9BYN7 854 aa21.7■■□□□ 1.06
MSLN-205ENST00000563941 PCIF1Q9H4Z3 704 aa21.7■■□□□ 1.06
MSLN-205ENST00000563941 TISP43B9A030 160 aa21.69■■□□□ 1.06
MSLN-205ENST00000563941 ITGA4P13612 1032 aa21.69■■□□□ 1.06
MSLN-205ENST00000563941 RFX1P22670 979 aa21.69■■□□□ 1.06
MSLN-205ENST00000563941 ECHS1P30084 290 aa21.69■■□□□ 1.06
MSLN-205ENST00000563941 DLG4P78352 724 aa21.69■■□□□ 1.06
MSLN-205ENST00000563941 EN1Q05925 392 aaPredicted RBP21.69■■□□□ 1.06
MSLN-205ENST00000563941 KIF22Q14807 665 aa21.69■■□□□ 1.06
MSLN-205ENST00000563941 DNAJC21Q5F1R6 531 aaKnown RBP21.69■■□□□ 1.06
MSLN-205ENST00000563941 NIPA1Q7RTP0 329 aa21.69■■□□□ 1.06
MSLN-205ENST00000563941 CD302Q8IX05 232 aa21.69■■□□□ 1.06
MSLN-205ENST00000563941 TMEM206Q9H813 350 aa21.69■■□□□ 1.06
MSLN-205ENST00000563941 SEPT11Q9NVA2 429 aaKnown RBP21.69■■□□□ 1.06
MSLN-205ENST00000563941 EMSYQ7Z589 1322 aa21.69■■□□□ 1.06
MSLN-205ENST00000563941 BHMG1C9JSJ3 638 aaPredicted RBP21.68■■□□□ 1.06
MSLN-205ENST00000563941 LRRN2O75325 713 aa21.68■■□□□ 1.06
MSLN-205ENST00000563941 MAPTP10636 758 aaKnown RBP21.68■■□□□ 1.06
MSLN-205ENST00000563941 GNGT1P63211 74 aa21.68■■□□□ 1.06
MSLN-205ENST00000563941 SKOR1P84550 965 aa21.68■■□□□ 1.06
MSLN-205ENST00000563941 PPATQ06203 517 aa21.68■■□□□ 1.06
MSLN-205ENST00000563941 ITGB3BPQ13352 177 aaPredicted RBP21.68■■□□□ 1.06
MSLN-205ENST00000563941 ALCAMQ13740 583 aa21.68■■□□□ 1.06
MSLN-205ENST00000563941 TKFCQ3LXA3 575 aa21.68■■□□□ 1.06
MSLN-205ENST00000563941 INTS8Q75QN2 995 aaKnown RBP21.68■■□□□ 1.06
MSLN-205ENST00000563941 SH2D3CQ8N5H7 860 aa21.68■■□□□ 1.06
MSLN-205ENST00000563941 TTLL6Q8N841 843 aa21.68■■□□□ 1.06
MSLN-205ENST00000563941 AGO4Q9HCK5 861 aaKnown RBP21.68■■□□□ 1.06
MSLN-205ENST00000563941 DBR1Q9UK59 544 aaKnown RBP21.68■■□□□ 1.06
MSLN-205ENST00000563941 SAMM50Q9Y512 469 aa21.68■■□□□ 1.06
MSLN-205ENST00000563941 GRIN2DO15399 1336 aa21.68■■□□□ 1.06
MSLN-205ENST00000563941 FOXN3O00409 490 aaPredicted RBP21.68■■□□□ 1.06
MSLN-205ENST00000563941 RARRES1P49788 294 aa21.68■■□□□ 1.06
MSLN-205ENST00000563941 SF3B2Q13435 895 aaKnown RBP21.68■■□□□ 1.06
MSLN-205ENST00000563941 KCTD16Q68DU8 428 aa21.68■■□□□ 1.06
MSLN-205ENST00000563941 POTEAQ6S8J7 498 aa21.68■■□□□ 1.06
MSLN-205ENST00000563941 PROCA1Q8NCQ7 364 aaPredicted RBP21.68■■□□□ 1.06
MSLN-205ENST00000563941 ARHGEF26Q96DR7 871 aa21.68■■□□□ 1.06
MSLN-205ENST00000563941 ACCSQ96QU6 501 aa21.68■■□□□ 1.06
MSLN-205ENST00000563941 TAS2R14Q9NYV8 317 aa21.68■■□□□ 1.06
MSLN-205ENST00000563941 PGAP2Q9UHJ9 254 aa21.68■■□□□ 1.06
MSLN-205ENST00000563941 UBIAD1Q9Y5Z9 338 aa21.68■■□□□ 1.06
MSLN-205ENST00000563941 VAMP7P51809 220 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms