RNA–Protein interactions for RNA: ENST00000563667.5

PDXDC1-209, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-209ENST00000563667 LRRC71Q8N4P6 559 aa17.05■□□□□ 0.32
PDXDC1-209ENST00000563667 METTL13Q8N6R0 699 aa17.05■□□□□ 0.32
PDXDC1-209ENST00000563667 RETREG2Q8NC44 543 aa17.05■□□□□ 0.32
PDXDC1-209ENST00000563667 PPP1R13LQ8WUF5 828 aa17.05■□□□□ 0.32
PDXDC1-209ENST00000563667 SCFD1Q8WVM8 642 aa17.05■□□□□ 0.32
PDXDC1-209ENST00000563667 BSNDQ8WZ55 320 aa17.05■□□□□ 0.32
PDXDC1-209ENST00000563667 TSG101Q99816 390 aa17.05■□□□□ 0.32
PDXDC1-209ENST00000563667 MTG1Q9BT17 334 aaPredicted RBP17.05■□□□□ 0.32
PDXDC1-209ENST00000563667 KMT5AQ9NQR1 393 aa17.05■□□□□ 0.32
PDXDC1-209ENST00000563667 PCDHB13Q9Y5F0 798 aa17.05■□□□□ 0.32
PDXDC1-209ENST00000563667 TRIM49BA6NDI0 452 aa17.04■□□□□ 0.32
PDXDC1-209ENST00000563667 MAGEB2O15479 319 aa17.04■□□□□ 0.32
PDXDC1-209ENST00000563667 GAS2O43903 313 aaKnown RBP17.04■□□□□ 0.32
PDXDC1-209ENST00000563667 ADAMTS4O75173 837 aa17.04■□□□□ 0.32
PDXDC1-209ENST00000563667 SMIM10L2AP0DMW4 78 aa17.04■□□□□ 0.32
PDXDC1-209ENST00000563667 SMIM10L2BP0DMW5 78 aa17.04■□□□□ 0.32
PDXDC1-209ENST00000563667 MAPTP10636 758 aaKnown RBP17.04■□□□□ 0.32
PDXDC1-209ENST00000563667 ARL2P36404 184 aa17.04■□□□□ 0.32
PDXDC1-209ENST00000563667 DNM2P50570 870 aa17.04■□□□□ 0.32
PDXDC1-209ENST00000563667 NCAPHQ15003 741 aa17.04■□□□□ 0.32
PDXDC1-209ENST00000563667 ZC2HC1CQ53FD0 456 aaPredicted RBP17.04■□□□□ 0.32
PDXDC1-209ENST00000563667 HABP4Q5JVS0 413 aaKnown RBP17.04■□□□□ 0.32
PDXDC1-209ENST00000563667 EFCAB12Q6NXP0 572 aa17.04■□□□□ 0.32
PDXDC1-209ENST00000563667 EPM2AIP1Q7L775 607 aaPredicted RBP17.04■□□□□ 0.32
PDXDC1-209ENST00000563667 ZBTB10Q96DT7 871 aa17.04■□□□□ 0.32
PDXDC1-209ENST00000563667 SEMA6BQ9H3T3 888 aa17.04■□□□□ 0.32
PDXDC1-209ENST00000563667 C17orf75Q9HAS0 396 aa17.04■□□□□ 0.32
PDXDC1-209ENST00000563667 SETD4Q9NVD3 440 aa17.04■□□□□ 0.32
PDXDC1-209ENST00000563667 FANCLQ9NW38 375 aa17.04■□□□□ 0.32
PDXDC1-209ENST00000563667 KCNG1Q9UIX4 513 aa17.04■□□□□ 0.32
PDXDC1-209ENST00000563667 ATP11BQ9Y2G3 1177 aa17.04■□□□□ 0.32
PDXDC1-209ENST00000563667 NFE2L3Q9Y4A8 694 aa17.04■□□□□ 0.32
PDXDC1-209ENST00000563667 RRN3P2A6NIE6 340 aa17.03■□□□□ 0.32
PDXDC1-209ENST00000563667 EIF3DO15371 548 aaKnown RBP eCLIP17.03■□□□□ 0.32
PDXDC1-209ENST00000563667 C22orf31O95567 290 aa17.03■□□□□ 0.32
PDXDC1-209ENST00000563667 GLRA2P23416 452 aa17.03■□□□□ 0.32
PDXDC1-209ENST00000563667 NPTX2P47972 431 aa17.03■□□□□ 0.32
PDXDC1-209ENST00000563667 PMS1P54277 932 aaKnown RBP17.03■□□□□ 0.32
PDXDC1-209ENST00000563667 RTP1P59025 263 aa17.03■□□□□ 0.32
PDXDC1-209ENST00000563667 NKX3-2P78367 333 aa17.03■□□□□ 0.32
PDXDC1-209ENST00000563667 ALCAMQ13740 583 aa17.03■□□□□ 0.32
PDXDC1-209ENST00000563667 PPP2R5AQ15172 486 aa17.03■□□□□ 0.32
PDXDC1-209ENST00000563667 ANKRD40Q6AI12 368 aa17.03■□□□□ 0.32
PDXDC1-209ENST00000563667 MTHFD1LQ6UB35 978 aa17.03■□□□□ 0.32
PDXDC1-209ENST00000563667 CXCL17Q6UXB2 119 aa17.03■□□□□ 0.32
PDXDC1-209ENST00000563667 HAUS6Q7Z4H7 955 aa17.03■□□□□ 0.32
PDXDC1-209ENST00000563667 KSR1Q8IVT5 923 aa17.03■□□□□ 0.32
PDXDC1-209ENST00000563667 C7orf31Q8N865 590 aa17.03■□□□□ 0.32
PDXDC1-209ENST00000563667 SLC17A8Q8NDX2 589 aa17.03■□□□□ 0.32
PDXDC1-209ENST00000563667 DEPTORQ8TB45 409 aa17.03■□□□□ 0.32
PDXDC1-209ENST00000563667 ZNF507Q8TCN5 953 aa17.03■□□□□ 0.32
PDXDC1-209ENST00000563667 ASAP3Q8TDY4 903 aa17.03■□□□□ 0.32
PDXDC1-209ENST00000563667 SPIRE2Q8WWL2 714 aa17.03■□□□□ 0.32
PDXDC1-209ENST00000563667 PRPF31Q8WWY3 499 aaKnown RBP17.03■□□□□ 0.32
PDXDC1-209ENST00000563667 PSPC1Q8WXF1 523 aaKnown RBP17.03■□□□□ 0.32
PDXDC1-209ENST00000563667 MED15Q96RN5 788 aa17.03■□□□□ 0.32
PDXDC1-209ENST00000563667 FIZ1Q96SL8 496 aa17.03■□□□□ 0.32
PDXDC1-209ENST00000563667 SUCLA2Q9P2R7 463 aaPredicted RBP17.03■□□□□ 0.32
PDXDC1-209ENST00000563667 FRMPD3Q5JV73 1810 aa17.03■□□□□ 0.32
PDXDC1-209ENST00000563667 IGKV6-21A0A0C4DH24 114 aa17.02■□□□□ 0.32
PDXDC1-209ENST00000563667 LRRIQ4A6NIV6 560 aa17.02■□□□□ 0.32
PDXDC1-209ENST00000563667 HAS3O00219 553 aa17.02■□□□□ 0.32
PDXDC1-209ENST00000563667 CDK11BP21127 795 aaKnown RBP17.02■□□□□ 0.32
PDXDC1-209ENST00000563667 TMOD1P28289 359 aa17.02■□□□□ 0.32
PDXDC1-209ENST00000563667 CLCN3P51790 818 aa17.02■□□□□ 0.32
PDXDC1-209ENST00000563667 NCKAP1LP55160 1127 aa17.02■□□□□ 0.32
PDXDC1-209ENST00000563667 DRP2Q13474 957 aa17.02■□□□□ 0.32
PDXDC1-209ENST00000563667 KCNA10Q16322 511 aa17.02■□□□□ 0.32
PDXDC1-209ENST00000563667 KNOP1Q1ED39 458 aaKnown RBP17.02■□□□□ 0.32
PDXDC1-209ENST00000563667 HSP90AA4PQ58FG1 418 aa17.02■□□□□ 0.32
PDXDC1-209ENST00000563667 CENPPQ6IPU0 288 aa17.02■□□□□ 0.32
PDXDC1-209ENST00000563667 SLC39A5Q6ZMH5 540 aa17.02■□□□□ 0.32
PDXDC1-209ENST00000563667 SYCP3Q8IZU3 236 aa17.02■□□□□ 0.32
PDXDC1-209ENST00000563667 PCSK9Q8NBP7 692 aaKnown RBP17.02■□□□□ 0.32
PDXDC1-209ENST00000563667 KLHDC9Q8NEP7 349 aa17.02■□□□□ 0.32
PDXDC1-209ENST00000563667 ANP32BQ92688 251 aaKnown RBP17.02■□□□□ 0.32
PDXDC1-209ENST00000563667 VTI1AQ96AJ9 217 aa17.02■□□□□ 0.32
PDXDC1-209ENST00000563667 KIFC3Q9BVG8 833 aa17.02■□□□□ 0.32
PDXDC1-209ENST00000563667 PRKAG2Q9UGJ0 569 aa17.02■□□□□ 0.32
PDXDC1-209ENST00000563667 PHF24Q9UPV7 400 aa17.02■□□□□ 0.32
PDXDC1-209ENST00000563667 UBE4BO95155 1302 aa17.01■□□□□ 0.31
PDXDC1-209ENST00000563667 NRCAMQ92823 1304 aa17.01■□□□□ 0.31
PDXDC1-209ENST00000563667 DENND3A2RUS2 1198 aa17.01■□□□□ 0.31
PDXDC1-209ENST00000563667 H0YCG3 227 aa17.01■□□□□ 0.31
PDXDC1-209ENST00000563667 ASGR1P07306 291 aa17.01■□□□□ 0.31
PDXDC1-209ENST00000563667 CST5P28325 142 aaPredicted RBP17.01■□□□□ 0.31
PDXDC1-209ENST00000563667 NAMPTP43490 491 aa17.01■□□□□ 0.31
PDXDC1-209ENST00000563667 LRRC63Q05C16 580 aa17.01■□□□□ 0.31
PDXDC1-209ENST00000563667 MKRN4PQ13434 485 aaPredicted RBP17.01■□□□□ 0.31
PDXDC1-209ENST00000563667 MXD4Q14582 209 aaPredicted RBP17.01■□□□□ 0.31
PDXDC1-209ENST00000563667 BMT2Q1RMZ1 405 aa17.01■□□□□ 0.31
PDXDC1-209ENST00000563667 TTI2Q6NXR4 508 aa17.01■□□□□ 0.31
PDXDC1-209ENST00000563667 RHPN2Q8IUC4 686 aa17.01■□□□□ 0.31
PDXDC1-209ENST00000563667 CREBRFQ8IUR6 639 aa17.01■□□□□ 0.31
PDXDC1-209ENST00000563667 CSGALNACT2Q8N6G5 542 aa17.01■□□□□ 0.31
PDXDC1-209ENST00000563667 LMBR1Q8WVP7 490 aa17.01■□□□□ 0.31
PDXDC1-209ENST00000563667 ACCSQ96QU6 501 aa17.01■□□□□ 0.31
PDXDC1-209ENST00000563667 DUSP9Q99956 384 aaKnown RBP17.01■□□□□ 0.31
PDXDC1-209ENST00000563667 SRRTQ9BXP5 876 aaKnown RBP17.01■□□□□ 0.31
PDXDC1-209ENST00000563667 SAMSN1Q9NSI8 373 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms