RNA–Protein interactions for RNA: ENST00000563645.1

GDE1-202, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 2

Gene GDE1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-202ENST00000563645 TMA7Q9Y2S6 64 aaKnown RBP5.33□□□□□ -1.56
GDE1-202ENST00000563645 RBM8AQ9Y5S9 174 aaKnown RBP5.33□□□□□ -1.56
GDE1-202ENST00000563645 A0A1W2PRX2 142 aa5.32□□□□□ -1.56
GDE1-202ENST00000563645 C2orf78A6NCI8 922 aa5.32□□□□□ -1.56
GDE1-202ENST00000563645 MYCLP1P12525 358 aaPredicted RBP5.32□□□□□ -1.56
GDE1-202ENST00000563645 STAT3P40763 770 aa5.32□□□□□ -1.56
GDE1-202ENST00000563645 ADCYAP1R1P41586 468 aa5.32□□□□□ -1.56
GDE1-202ENST00000563645 BPIFB4P59827 614 aa5.32□□□□□ -1.56
GDE1-202ENST00000563645 ADAM8P78325 824 aa5.32□□□□□ -1.56
GDE1-202ENST00000563645 FOXL1Q12952 345 aa5.32□□□□□ -1.56
GDE1-202ENST00000563645 TCIRG1Q13488 830 aa5.32□□□□□ -1.56
GDE1-202ENST00000563645 SAFB2Q14151 953 aaKnown RBP eCLIP5.32□□□□□ -1.56
GDE1-202ENST00000563645 GRM7Q14831 915 aa5.32□□□□□ -1.56
GDE1-202ENST00000563645 UNQ6494/PRO21346Q6UXR6 183 aa5.32□□□□□ -1.56
GDE1-202ENST00000563645 ESPNLQ6ZVH7 1005 aa5.32□□□□□ -1.56
GDE1-202ENST00000563645 C11orf74Q86VG3 221 aa5.32□□□□□ -1.56
GDE1-202ENST00000563645 ZNF808Q8N4W9 903 aaPredicted RBP5.32□□□□□ -1.56
GDE1-202ENST00000563645 ZNF610Q8N9Z0 462 aa5.32□□□□□ -1.56
GDE1-202ENST00000563645 LEO1Q8WVC0 666 aaPredicted RBP5.32□□□□□ -1.56
GDE1-202ENST00000563645 FERMT2Q96AC1 680 aa5.32□□□□□ -1.56
GDE1-202ENST00000563645 AGO3Q9H9G7 860 aaKnown RBP5.32□□□□□ -1.56
GDE1-202ENST00000563645 MSRAQ9UJ68 235 aa5.32□□□□□ -1.56
GDE1-202ENST00000563645 SYNPO2Q9UMS6 1093 aa5.32□□□□□ -1.56
GDE1-202ENST00000563645 MAPRE3Q9UPY8 281 aa5.32□□□□□ -1.56
GDE1-202ENST00000563645 ST20-MTHFSA0A0A6YYL1 179 aa5.31□□□□□ -1.56
GDE1-202ENST00000563645 TLDC2A0PJX2 215 aa5.31□□□□□ -1.56
GDE1-202ENST00000563645 ELL2O00472 640 aaPredicted RBP5.31□□□□□ -1.56
GDE1-202ENST00000563645 FKBP9O95302 570 aa5.31□□□□□ -1.56
GDE1-202ENST00000563645 LSP1P33241 339 aa5.31□□□□□ -1.56
GDE1-202ENST00000563645 TERF2Q15554 542 aa5.31□□□□□ -1.56
GDE1-202ENST00000563645 GAGE13Q4V321 117 aa5.31□□□□□ -1.56
GDE1-202ENST00000563645 ZBTB41Q5SVQ8 909 aa5.31□□□□□ -1.56
GDE1-202ENST00000563645 FKBP9P1Q75LS8 142 aa5.31□□□□□ -1.56
GDE1-202ENST00000563645 ADGRE4PQ86SQ3 457 aa5.31□□□□□ -1.56
GDE1-202ENST00000563645 ANKRD53Q8N9V6 530 aa5.31□□□□□ -1.56
GDE1-202ENST00000563645 PLA2G15Q8NCC3 412 aa5.31□□□□□ -1.56
GDE1-202ENST00000563645 TMEM176AQ96HP8 235 aa5.31□□□□□ -1.56
GDE1-202ENST00000563645 HIST1H2AHQ96KK5 128 aa5.31□□□□□ -1.56
GDE1-202ENST00000563645 HIST1H2AJQ99878 128 aa5.31□□□□□ -1.56
GDE1-202ENST00000563645 NOL10Q9BSC4 688 aaKnown RBP5.31□□□□□ -1.56
GDE1-202ENST00000563645 TOX4O94842 621 aa5.3□□□□□ -1.56
GDE1-202ENST00000563645 VSIG10L2P0DP72 767 aa5.3□□□□□ -1.56
GDE1-202ENST00000563645 HNRNPLP14866 589 aaKnown RBP eCLIP5.3□□□□□ -1.56
GDE1-202ENST00000563645 TACR2P21452 398 aa5.3□□□□□ -1.56
GDE1-202ENST00000563645 GYS2P54840 703 aa5.3□□□□□ -1.56
GDE1-202ENST00000563645 ZXDAP98168 799 aa5.3□□□□□ -1.56
GDE1-202ENST00000563645 HHEXQ03014 270 aa5.3□□□□□ -1.56
GDE1-202ENST00000563645 ACAP1Q15027 740 aa5.3□□□□□ -1.56
GDE1-202ENST00000563645 DHCR24Q15392 516 aa5.3□□□□□ -1.56
GDE1-202ENST00000563645 MAN2A1Q16706 1144 aa5.3□□□□□ -1.56
GDE1-202ENST00000563645 GIMAP6Q6P9H5 292 aa5.3□□□□□ -1.56
GDE1-202ENST00000563645 CRIP3Q6Q6R5 217 aa5.3□□□□□ -1.56
GDE1-202ENST00000563645 RNF207Q6ZRF8 634 aa5.3□□□□□ -1.56
GDE1-202ENST00000563645 THNSL2Q86YJ6 484 aa5.3□□□□□ -1.56
GDE1-202ENST00000563645 D2HGDHQ8N465 521 aa5.3□□□□□ -1.56
GDE1-202ENST00000563645 ZNF496Q96IT1 587 aaPredicted RBP5.3□□□□□ -1.56
GDE1-202ENST00000563645 RPL10LQ96L21 214 aaKnown RBP5.3□□□□□ -1.56
GDE1-202ENST00000563645 GPHA2Q96T91 129 aa5.3□□□□□ -1.56
GDE1-202ENST00000563645 ANP32EQ9BTT0 268 aa5.3□□□□□ -1.56
GDE1-202ENST00000563645 OSBPL6Q9BZF3 934 aa5.3□□□□□ -1.56
GDE1-202ENST00000563645 VPS11Q9H270 941 aa5.3□□□□□ -1.56
GDE1-202ENST00000563645 C14orf93Q9H972 538 aaKnown RBP5.3□□□□□ -1.56
GDE1-202ENST00000563645 EMC7Q9NPA0 242 aa5.3□□□□□ -1.56
GDE1-202ENST00000563645 TLR9Q9NR96 1032 aa5.3□□□□□ -1.56
GDE1-202ENST00000563645 MYPNQ86TC9 1320 aa5.29□□□□□ -1.56
GDE1-202ENST00000563645 A0A0A6YYK5 440 aaPredicted RBP5.29□□□□□ -1.56
GDE1-202ENST00000563645 DAPK3O43293 454 aa5.29□□□□□ -1.56
GDE1-202ENST00000563645 FSBPO95073 299 aa5.29□□□□□ -1.56
GDE1-202ENST00000563645 PCDH8O95206 1070 aa5.29□□□□□ -1.56
GDE1-202ENST00000563645 PFKMP08237 780 aa5.29□□□□□ -1.56
GDE1-202ENST00000563645 C6P13671 934 aa5.29□□□□□ -1.56
GDE1-202ENST00000563645 BPIP17213 487 aa5.29□□□□□ -1.56
GDE1-202ENST00000563645 ACRV1P26436 265 aa5.29□□□□□ -1.56
GDE1-202ENST00000563645 HSD3B2P26439 372 aa5.29□□□□□ -1.56
GDE1-202ENST00000563645 KRT40Q6A162 431 aa5.29□□□□□ -1.56
GDE1-202ENST00000563645 SDE2Q6IQ49 451 aa5.29□□□□□ -1.56
GDE1-202ENST00000563645 RNF180Q86T96 592 aa5.29□□□□□ -1.56
GDE1-202ENST00000563645 CXorf67Q86X51 503 aaPredicted RBP5.29□□□□□ -1.56
GDE1-202ENST00000563645 CDYL2Q8N8U2 506 aa5.29□□□□□ -1.56
GDE1-202ENST00000563645 USP7Q93009 1102 aa5.29□□□□□ -1.56
GDE1-202ENST00000563645 MPHOSPH9Q99550 1183 aa5.29□□□□□ -1.56
GDE1-202ENST00000563645 SOX7Q9BT81 388 aa5.29□□□□□ -1.56
GDE1-202ENST00000563645 ZNF747Q9BV97 191 aa5.29□□□□□ -1.56
GDE1-202ENST00000563645 SLKQ9H2G2 1235 aaPredicted RBP5.29□□□□□ -1.56
GDE1-202ENST00000563645 MS4A5Q9H3V2 200 aa5.29□□□□□ -1.56
GDE1-202ENST00000563645 IL23AQ9NPF7 189 aa5.29□□□□□ -1.56
GDE1-202ENST00000563645 PCDHB6Q9Y5E3 794 aa5.29□□□□□ -1.56
GDE1-202ENST00000563645 LOC105371045A0A1W2PR82 267 aa5.28□□□□□ -1.56
GDE1-202ENST00000563645 LCHNA4D1U4 455 aa5.28□□□□□ -1.56
GDE1-202ENST00000563645 GOLGA8BA8MQT2 603 aa5.28□□□□□ -1.56
GDE1-202ENST00000563645 CAPN14A8MX76 684 aa5.28□□□□□ -1.56
GDE1-202ENST00000563645 MTSS1O43312 755 aa5.28□□□□□ -1.56
GDE1-202ENST00000563645 KDM1AO60341 852 aa5.28□□□□□ -1.56
GDE1-202ENST00000563645 JUNP05412 331 aaKnown RBP5.28□□□□□ -1.56
GDE1-202ENST00000563645 DDB1Q16531 1140 aa5.28□□□□□ -1.56
GDE1-202ENST00000563645 NRN1LQ496H8 165 aa5.28□□□□□ -1.56
GDE1-202ENST00000563645 ATP13A4Q4VNC1 1196 aa5.28□□□□□ -1.56
GDE1-202ENST00000563645 USP39Q53GS9 565 aaKnown RBP5.28□□□□□ -1.56
GDE1-202ENST00000563645 FRMD7Q6ZUT3 714 aa5.28□□□□□ -1.56
GDE1-202ENST00000563645 GAREM2Q75VX8 874 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms