RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 CBX2Q14781 532 aaPredicted RBP23.55■■□□□ 1.36
CHD9-208ENST00000563410 TMEM184AQ6ZMB5 413 aa23.55■■□□□ 1.36
CHD9-208ENST00000563410 ANO5Q75V66 913 aa23.55■■□□□ 1.36
CHD9-208ENST00000563410 KRT25Q7Z3Z0 450 aa23.55■■□□□ 1.36
CHD9-208ENST00000563410 HELQQ8TDG4 1101 aa23.55■■□□□ 1.36
CHD9-208ENST00000563410 TCF25Q9BQ70 676 aa23.55■■□□□ 1.36
CHD9-208ENST00000563410 FDXACB1Q9BRP7 624 aaPredicted RBP23.55■■□□□ 1.36
CHD9-208ENST00000563410 GCOM2Q9BZD3 368 aaPredicted RBP23.55■■□□□ 1.36
CHD9-208ENST00000563410 DACT1Q9NYF0 836 aa23.55■■□□□ 1.36
CHD9-208ENST00000563410 PUF60Q9UHX1 559 aaKnown RBP23.55■■□□□ 1.36
CHD9-208ENST00000563410 DDX11L8A8MPP1 907 aa23.54■■□□□ 1.36
CHD9-208ENST00000563410 HIDE1A8MVS5 230 aa23.54■■□□□ 1.36
CHD9-208ENST00000563410 MAFO75444 373 aaPredicted RBP23.54■■□□□ 1.36
CHD9-208ENST00000563410 PPM1AP35813 382 aa23.54■■□□□ 1.36
CHD9-208ENST00000563410 CDC42EP1Q00587 391 aa23.54■■□□□ 1.36
CHD9-208ENST00000563410 LETM2Q2VYF4 491 aa23.54■■□□□ 1.36
CHD9-208ENST00000563410 HFE2Q6ZVN8 426 aa23.54■■□□□ 1.36
CHD9-208ENST00000563410 SUSD6Q92537 303 aa23.54■■□□□ 1.36
CHD9-208ENST00000563410 KCNMB3Q9NPA1 279 aa23.54■■□□□ 1.36
CHD9-208ENST00000563410 ENTPD7Q9NQZ7 604 aa23.54■■□□□ 1.36
CHD9-208ENST00000563410 CHST12Q9NRB3 414 aa23.54■■□□□ 1.36
CHD9-208ENST00000563410 ARID2Q68CP9 1835 aa23.54■■□□□ 1.36
CHD9-208ENST00000563410 DTNBO60941 627 aa23.53■■□□□ 1.36
CHD9-208ENST00000563410 DNM2P50570 870 aa23.53■■□□□ 1.36
CHD9-208ENST00000563410 PSMC5P62195 406 aa23.53■■□□□ 1.36
CHD9-208ENST00000563410 PPP2R5CQ13362 524 aa23.53■■□□□ 1.36
CHD9-208ENST00000563410 SLC39A11Q8N1S5 342 aa23.53■■□□□ 1.36
CHD9-208ENST00000563410 TRAIPQ9BWF2 469 aa23.53■■□□□ 1.36
CHD9-208ENST00000563410 PHF7Q9BWX1 381 aaPredicted RBP23.53■■□□□ 1.36
CHD9-208ENST00000563410 S1PR5Q9H228 398 aa23.53■■□□□ 1.36
CHD9-208ENST00000563410 NGRNQ9NPE2 291 aaKnown RBP23.53■■□□□ 1.36
CHD9-208ENST00000563410 GJB4Q9NTQ9 266 aa23.53■■□□□ 1.36
CHD9-208ENST00000563410 SPG21Q9NZD8 308 aa23.53■■□□□ 1.36
CHD9-208ENST00000563410 SUCLA2Q9P2R7 463 aaPredicted RBP23.53■■□□□ 1.36
CHD9-208ENST00000563410 VAV3Q9UKW4 847 aa23.53■■□□□ 1.36
CHD9-208ENST00000563410 PHKA2P46019 1235 aa23.52■■□□□ 1.36
CHD9-208ENST00000563410 KRT17Q04695 432 aa23.52■■□□□ 1.36
CHD9-208ENST00000563410 PLA2G4FQ68DD2 849 aa23.52■■□□□ 1.36
CHD9-208ENST00000563410 ZNF410Q86VK4 478 aa23.52■■□□□ 1.36
CHD9-208ENST00000563410 RHPN2Q8IUC4 686 aa23.52■■□□□ 1.36
CHD9-208ENST00000563410 KSR1Q8IVT5 923 aa23.52■■□□□ 1.36
CHD9-208ENST00000563410 EDAQ92838 391 aa23.52■■□□□ 1.36
CHD9-208ENST00000563410 STK36Q9NRP7 1315 aa23.52■■□□□ 1.36
CHD9-208ENST00000563410 SFPQP23246 707 aaKnown RBP eCLIP23.51■■□□□ 1.352e-7■□□□□ 11
CHD9-208ENST00000563410 PPP4R3AQ6IN85 833 aa23.51■■□□□ 1.35
CHD9-208ENST00000563410 ANKRD54Q6NXT1 300 aa23.51■■□□□ 1.35
CHD9-208ENST00000563410 SYCE2Q6PIF2 218 aa23.51■■□□□ 1.35
CHD9-208ENST00000563410 TMC7Q7Z402 723 aa23.51■■□□□ 1.35
CHD9-208ENST00000563410 NEK8Q86SG6 692 aa23.51■■□□□ 1.35
CHD9-208ENST00000563410 ZNF579Q8NAF0 562 aaKnown RBP23.51■■□□□ 1.35
CHD9-208ENST00000563410 OXER1Q8TDS5 423 aa23.51■■□□□ 1.35
CHD9-208ENST00000563410 HAS1Q92839 578 aa23.51■■□□□ 1.35
CHD9-208ENST00000563410 FAM20AQ96MK3 541 aa23.51■■□□□ 1.35
CHD9-208ENST00000563410 CYP26B1Q9NR63 512 aa23.51■■□□□ 1.35
CHD9-208ENST00000563410 WRAP73Q9P2S5 460 aaPredicted RBP23.51■■□□□ 1.35
CHD9-208ENST00000563410 TPCN1Q9ULQ1 816 aa23.51■■□□□ 1.35
CHD9-208ENST00000563410 MYO10Q9HD67 2058 aa23.51■■□□□ 1.35
CHD9-208ENST00000563410 CCDC194A0A1B0GVG4 234 aa23.5■■□□□ 1.35
CHD9-208ENST00000563410 NT5C1B-RDH14C9J2C7 533 aa23.5■■□□□ 1.35
CHD9-208ENST00000563410 PFKFB2O60825 505 aa23.5■■□□□ 1.35
CHD9-208ENST00000563410 CDKL5O76039 1030 aa23.5■■□□□ 1.35
CHD9-208ENST00000563410 TECP42680 631 aa23.5■■□□□ 1.35
CHD9-208ENST00000563410 QARSP47897 775 aaKnown RBP23.5■■□□□ 1.35
CHD9-208ENST00000563410 NPEPPSP55786 919 aa23.5■■□□□ 1.35
CHD9-208ENST00000563410 LLGL2Q6P1M3 1020 aa23.5■■□□□ 1.35
CHD9-208ENST00000563410 LPPQ93052 612 aa23.5■■□□□ 1.35
CHD9-208ENST00000563410 MRPL9Q9BYD2 267 aaKnown RBP23.5■■□□□ 1.35
CHD9-208ENST00000563410 INO80BQ9C086 356 aaPredicted RBP23.5■■□□□ 1.35
CHD9-208ENST00000563410 SLKQ9H2G2 1235 aaPredicted RBP23.5■■□□□ 1.35
CHD9-208ENST00000563410 IFT122Q9HBG6 1241 aa23.5■■□□□ 1.35
CHD9-208ENST00000563410 PIN4Q9Y237 131 aaKnown RBP23.5■■□□□ 1.35
CHD9-208ENST00000563410 ZDBF2Q9HCK1 2354 aa23.5■■□□□ 1.35
CHD9-208ENST00000563410 CTDNEP1O95476 244 aa23.49■■□□□ 1.35
CHD9-208ENST00000563410 GCFC2P16383 781 aaKnown RBP23.49■■□□□ 1.35
CHD9-208ENST00000563410 BCAR1P56945 870 aa23.49■■□□□ 1.35
CHD9-208ENST00000563410 EARS2Q5JPH6 523 aaKnown RBP23.49■■□□□ 1.35
CHD9-208ENST00000563410 TWF2Q6IBS0 349 aaKnown RBP23.49■■□□□ 1.35
CHD9-208ENST00000563410 RPGRIP1Q96KN7 1286 aa23.49■■□□□ 1.35
CHD9-208ENST00000563410 NLRP4Q96MN2 994 aa23.49■■□□□ 1.35
CHD9-208ENST00000563410 C2orf71A6NGG8 1288 aa23.48■■□□□ 1.35
CHD9-208ENST00000563410 MEIS3P2A8K0S8 358 aa23.48■■□□□ 1.35
CHD9-208ENST00000563410 CCNT1O60563 726 aaKnown RBP23.48■■□□□ 1.35
CHD9-208ENST00000563410 P4HBP07237 508 aaKnown RBP23.48■■□□□ 1.35
CHD9-208ENST00000563410 SRGAP2BP0DMP2 458 aa23.48■■□□□ 1.35
CHD9-208ENST00000563410 LONRF3Q496Y0 759 aa23.48■■□□□ 1.35
CHD9-208ENST00000563410 PIK3AP1Q6ZUJ8 805 aa23.48■■□□□ 1.35
CHD9-208ENST00000563410 MRPL43Q8N983 215 aaKnown RBP23.48■■□□□ 1.35
CHD9-208ENST00000563410 JPH2Q9BR39 696 aaPredicted RBP23.48■■□□□ 1.35
CHD9-208ENST00000563410 DHX33Q9H6R0 707 aaKnown RBP23.48■■□□□ 1.35
CHD9-208ENST00000563410 FAM105AQ9NUU6 356 aa23.48■■□□□ 1.35
CHD9-208ENST00000563410 TBX3O15119 743 aa23.47■■□□□ 1.35
CHD9-208ENST00000563410 ZNF623O75123 536 aa23.47■■□□□ 1.35
CHD9-208ENST00000563410 XBP1P17861 261 aa23.47■■□□□ 1.35
CHD9-208ENST00000563410 ALDH7A1P49419 539 aaKnown RBP23.47■■□□□ 1.35
CHD9-208ENST00000563410 ZXDAP98168 799 aa23.47■■□□□ 1.35
CHD9-208ENST00000563410 SMC1AQ14683 1233 aaKnown RBP23.47■■□□□ 1.35
CHD9-208ENST00000563410 CATSPER4Q7RTX7 472 aa23.47■■□□□ 1.35
CHD9-208ENST00000563410 TMEM173Q86WV6 379 aaPredicted RBP23.47■■□□□ 1.35
CHD9-208ENST00000563410 POTEDQ86YR6 584 aa23.47■■□□□ 1.35
CHD9-208ENST00000563410 APOL5Q9BWW9 433 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms