RNA–Protein interactions for RNA: ENST00000563293.1

RPAP1-205, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-205ENST00000563293 UBE2SQ16763 222 aa10.59□□□□□ -0.71
RPAP1-205ENST00000563293 INF2Q27J81 1249 aa10.59□□□□□ -0.71
RPAP1-205ENST00000563293 ANKRD54Q6NXT1 300 aa10.59□□□□□ -0.71
RPAP1-205ENST00000563293 KANK3Q6NY19 840 aa10.59□□□□□ -0.71
RPAP1-205ENST00000563293 TMEM184AQ6ZMB5 413 aa10.59□□□□□ -0.71
RPAP1-205ENST00000563293 NIPA1Q7RTP0 329 aa10.59□□□□□ -0.71
RPAP1-205ENST00000563293 LINC00301Q8NCQ3 95 aa10.59□□□□□ -0.71
RPAP1-205ENST00000563293 RASGRP4Q8TDF6 673 aa10.59□□□□□ -0.71
RPAP1-205ENST00000563293 CRYGNQ8WXF5 182 aa10.59□□□□□ -0.71
RPAP1-205ENST00000563293 USP28Q96RU2 1077 aa10.59□□□□□ -0.71
RPAP1-205ENST00000563293 SENP7Q9BQF6 1050 aa10.59□□□□□ -0.71
RPAP1-205ENST00000563293 TYW1Q9NV66 732 aaKnown RBP10.59□□□□□ -0.71
RPAP1-205ENST00000563293 TMEM260Q9NX78 707 aa10.59□□□□□ -0.71
RPAP1-205ENST00000563293 NCOR2Q9Y618 2525 aa10.59□□□□□ -0.71
RPAP1-205ENST00000563293 GOLGA6L4A6NEF3 574 aa10.58□□□□□ -0.72
RPAP1-205ENST00000563293 TBKBP1A7MCY6 615 aa10.58□□□□□ -0.72
RPAP1-205ENST00000563293 C2CD4DB7Z1M9 353 aa10.58□□□□□ -0.72
RPAP1-205ENST00000563293 SPTLC2O15270 562 aa10.58□□□□□ -0.72
RPAP1-205ENST00000563293 MAFGO15525 162 aa10.58□□□□□ -0.72
RPAP1-205ENST00000563293 ASGR2P07307 311 aa10.58□□□□□ -0.72
RPAP1-205ENST00000563293 ZNF76P36508 570 aa10.58□□□□□ -0.72
RPAP1-205ENST00000563293 PRPHP41219 470 aa10.58□□□□□ -0.72
RPAP1-205ENST00000563293 SETQ01105 290 aaPredicted RBP10.58□□□□□ -0.72
RPAP1-205ENST00000563293 LETM2Q2VYF4 491 aa10.58□□□□□ -0.72
RPAP1-205ENST00000563293 Q4G0T1 1027 aa10.58□□□□□ -0.72
RPAP1-205ENST00000563293 EARS2Q5JPH6 523 aaKnown RBP10.58□□□□□ -0.72
RPAP1-205ENST00000563293 PLPP4Q5VZY2 271 aa10.58□□□□□ -0.72
RPAP1-205ENST00000563293 PCNX4Q63HM2 1172 aa10.58□□□□□ -0.72
RPAP1-205ENST00000563293 LRRC55Q6ZSA7 311 aa10.58□□□□□ -0.72
RPAP1-205ENST00000563293 ZBTB33Q86T24 672 aa10.58□□□□□ -0.72
RPAP1-205ENST00000563293 RSPH3Q86UC2 560 aa10.58□□□□□ -0.72
RPAP1-205ENST00000563293 ADSSL1Q8N142 457 aa10.58□□□□□ -0.72
RPAP1-205ENST00000563293 ZNF579Q8NAF0 562 aaKnown RBP10.58□□□□□ -0.72
RPAP1-205ENST00000563293 LEO1Q8WVC0 666 aaPredicted RBP10.58□□□□□ -0.72
RPAP1-205ENST00000563293 MBOAT7Q96N66 472 aa10.58□□□□□ -0.72
RPAP1-205ENST00000563293 IRF2BPLQ9H1B7 796 aa10.58□□□□□ -0.72
RPAP1-205ENST00000563293 CWH43Q9H720 699 aa10.58□□□□□ -0.72
RPAP1-205ENST00000563293 ERAP1Q9NZ08 941 aa10.58□□□□□ -0.72
RPAP1-205ENST00000563293 TFIP11Q9UBB9 837 aaKnown RBP10.58□□□□□ -0.72
RPAP1-205ENST00000563293 STK24Q9Y6E0 443 aa10.58□□□□□ -0.72
RPAP1-205ENST00000563293 IGSF9BQ9UPX0 1349 aa10.58□□□□□ -0.72
RPAP1-205ENST00000563293 CACNA1BQ00975 2339 aa10.57□□□□□ -0.72
RPAP1-205ENST00000563293 EVPLQ92817 2033 aa10.57□□□□□ -0.72
RPAP1-205ENST00000563293 PI15O43692 258 aa10.57□□□□□ -0.72
RPAP1-205ENST00000563293 NEMFO60524 1076 aa10.57□□□□□ -0.72
RPAP1-205ENST00000563293 CCNT1O60563 726 aaKnown RBP10.57□□□□□ -0.72
RPAP1-205ENST00000563293 FGFR1P11362 822 aa10.57□□□□□ -0.72
RPAP1-205ENST00000563293 PBX3P40426 434 aa10.57□□□□□ -0.72
RPAP1-205ENST00000563293 ID4P47928 161 aa10.57□□□□□ -0.72
RPAP1-205ENST00000563293 UBE2HP62256 183 aa10.57□□□□□ -0.72
RPAP1-205ENST00000563293 ATP2C1P98194 919 aaPredicted RBP10.57□□□□□ -0.72
RPAP1-205ENST00000563293 PAK2Q13177 524 aa10.57□□□□□ -0.72
RPAP1-205ENST00000563293 PTPAQ15257 358 aa10.57□□□□□ -0.72
RPAP1-205ENST00000563293 ZNF174Q15697 407 aa10.57□□□□□ -0.72
RPAP1-205ENST00000563293 SKOR2Q2VWA4 1001 aaPredicted RBP10.57□□□□□ -0.72
RPAP1-205ENST00000563293 FOXD4L6Q3SYB3 417 aaPredicted RBP10.57□□□□□ -0.72
RPAP1-205ENST00000563293 SPOUT1Q5T280 376 aaKnown RBP10.57□□□□□ -0.72
RPAP1-205ENST00000563293 ADALQ6DHV7 355 aa10.57□□□□□ -0.72
RPAP1-205ENST00000563293 FAM173BQ6P4H8 233 aa10.57□□□□□ -0.72
RPAP1-205ENST00000563293 FOXD4L3Q6VB84 417 aaPredicted RBP10.57□□□□□ -0.72
RPAP1-205ENST00000563293 SLFN12Q8IYM2 578 aa10.57□□□□□ -0.72
RPAP1-205ENST00000563293 KRI1Q8N9T8 703 aaKnown RBP10.57□□□□□ -0.72
RPAP1-205ENST00000563293 COLGALT1Q8NBJ5 622 aa10.57□□□□□ -0.72
RPAP1-205ENST00000563293 TMEM40Q8WWA1 233 aa10.57□□□□□ -0.72
RPAP1-205ENST00000563293 SEPT1Q8WYJ6 367 aa10.57□□□□□ -0.72
RPAP1-205ENST00000563293 GLG1Q92896 1179 aa10.57□□□□□ -0.72
RPAP1-205ENST00000563293 CDHR1Q96JP9 859 aa10.57□□□□□ -0.72
RPAP1-205ENST00000563293 FAM20AQ96MK3 541 aa10.57□□□□□ -0.72
RPAP1-205ENST00000563293 FTHL17Q9BXU8 183 aa10.57□□□□□ -0.72
RPAP1-205ENST00000563293 CELF4Q9BZC1 486 aaKnown RBP10.57□□□□□ -0.72
RPAP1-205ENST00000563293 RAB34Q9BZG1 259 aa10.57□□□□□ -0.72
RPAP1-205ENST00000563293 POMKQ9H5K3 350 aa10.57□□□□□ -0.72
RPAP1-205ENST00000563293 DDX25Q9UHL0 483 aaKnown RBP10.57□□□□□ -0.72
RPAP1-205ENST00000563293 NOC2LQ9Y3T9 749 aaKnown RBP10.57□□□□□ -0.72
RPAP1-205ENST00000563293 PCDHB7Q9Y5E2 793 aa10.57□□□□□ -0.72
RPAP1-205ENST00000563293 PCDHB6Q9Y5E3 794 aa10.57□□□□□ -0.72
RPAP1-205ENST00000563293 PCDHB12Q9Y5F1 795 aa10.57□□□□□ -0.72
RPAP1-205ENST00000563293 SRPRBQ9Y5M8 271 aaKnown RBP10.57□□□□□ -0.72
RPAP1-205ENST00000563293 TRPV2Q9Y5S1 764 aa10.57□□□□□ -0.72
RPAP1-205ENST00000563293 CLIC4Q9Y696 253 aa10.57□□□□□ -0.72
RPAP1-205ENST00000563293 EPG5Q9HCE0 2579 aa10.57□□□□□ -0.72
RPAP1-205ENST00000563293 A0A1W2PQ27 194 aa10.56□□□□□ -0.72
RPAP1-205ENST00000563293 A0A1W2PQ64 194 aa10.56□□□□□ -0.72
RPAP1-205ENST00000563293 A0A1W2PQD8 194 aa10.56□□□□□ -0.72
RPAP1-205ENST00000563293 MED19A0JLT2 244 aaPredicted RBP10.56□□□□□ -0.72
RPAP1-205ENST00000563293 MARCH6O60337 910 aa10.56□□□□□ -0.72
RPAP1-205ENST00000563293 CUTAO60888 179 aa10.56□□□□□ -0.72
RPAP1-205ENST00000563293 STAG3L1P0CL83 205 aa10.56□□□□□ -0.72
RPAP1-205ENST00000563293 ATP2B1P20020 1258 aa10.56□□□□□ -0.72
RPAP1-205ENST00000563293 MCM7P33993 719 aa10.56□□□□□ -0.72
RPAP1-205ENST00000563293 ME1P48163 572 aa10.56□□□□□ -0.72
RPAP1-205ENST00000563293 SARSP49591 514 aaKnown RBP10.56□□□□□ -0.72
RPAP1-205ENST00000563293 NUBP1P53384 320 aa10.56□□□□□ -0.72
RPAP1-205ENST00000563293 NFX1Q12986 1120 aaKnown RBP10.56□□□□□ -0.72
RPAP1-205ENST00000563293 PTGDRQ13258 359 aa10.56□□□□□ -0.72
RPAP1-205ENST00000563293 PLCB4Q15147 1175 aa10.56□□□□□ -0.72
RPAP1-205ENST00000563293 CEP55Q53EZ4 464 aa10.56□□□□□ -0.72
RPAP1-205ENST00000563293 IER5Q5VY09 327 aa10.56□□□□□ -0.72
RPAP1-205ENST00000563293 ERMP1Q7Z2K6 904 aa10.56□□□□□ -0.72
RPAP1-205ENST00000563293 NLRX1Q86UT6 975 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms