RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 CA3P07451 260 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 SRGAP2CP0DJJ0 459 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 PDIA4P13667 645 aaKnown RBP9.5□□□□□ -0.89
UBR1-204ENST00000563239 DDIT3P35638 169 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 LONP1P36776 959 aaKnown RBP9.5□□□□□ -0.89
UBR1-204ENST00000563239 CAPSQ13938 189 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 RAB30Q15771 203 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 SPECC1Q5M775 1068 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 FAM117BQ6P1L5 589 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 MAEAQ7L5Y9 396 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 CABP7Q86V35 215 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 DAW1Q8N136 415 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 DEFB123Q8N688 67 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 LINC00301Q8NCQ3 95 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 SP7Q8TDD2 431 aaPredicted RBP9.5□□□□□ -0.89
UBR1-204ENST00000563239 TCP11Q8WWU5 503 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 BSNDQ8WZ55 320 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 EPSTI1Q96J88 318 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 CHAMP1Q96JM3 812 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 NLRP4Q96MN2 994 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 GUCD1Q96NT3 240 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 CLIC6Q96NY7 704 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 PLIN2Q99541 437 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 RAD9AQ99638 391 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 ADAM2Q99965 735 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 RUSC1Q9BVN2 902 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 FTHL17Q9BXU8 183 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 GCOM2Q9BZD3 368 aaPredicted RBP9.5□□□□□ -0.89
UBR1-204ENST00000563239 POLR3FQ9H1D9 316 aaPredicted RBP9.5□□□□□ -0.89
UBR1-204ENST00000563239 RC3H2Q9HBD1 1191 aaKnown RBP9.5□□□□□ -0.89
UBR1-204ENST00000563239 POLD4Q9HCU8 107 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 RGS18Q9NS28 235 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 MTMR10Q9NXD2 777 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 MSRAQ9UJ68 235 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 DNM3Q9UQ16 869 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 REV3LO60673 3130 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 MYH15Q9Y2K3 1946 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 TMEM265A0A087WTH1 108 aa9.49□□□□□ -0.89
UBR1-204ENST00000563239 ASAP2O43150 1006 aa9.49□□□□□ -0.89
UBR1-204ENST00000563239 SLC26A4O43511 780 aa9.49□□□□□ -0.89
UBR1-204ENST00000563239 TLL1O43897 1013 aa9.49□□□□□ -0.89
UBR1-204ENST00000563239 UPP2O95045 317 aa9.49□□□□□ -0.89
UBR1-204ENST00000563239 LINC00271P0C7V0 271 aa9.49□□□□□ -0.89
UBR1-204ENST00000563239 HOXA11P31270 313 aaPredicted RBP9.49□□□□□ -0.89
UBR1-204ENST00000563239 SLC12A3P55017 1021 aa9.49□□□□□ -0.89
UBR1-204ENST00000563239 PTENP60484 403 aa9.49□□□□□ -0.89
UBR1-204ENST00000563239 TAP1Q03518 808 aa9.49□□□□□ -0.89
UBR1-204ENST00000563239 POU5F1BQ06416 359 aa9.49□□□□□ -0.89
UBR1-204ENST00000563239 MAPK7Q13164 816 aa9.49□□□□□ -0.89
UBR1-204ENST00000563239 MXD4Q14582 209 aaPredicted RBP9.49□□□□□ -0.89
UBR1-204ENST00000563239 GRIN2CQ14957 1233 aa9.49□□□□□ -0.89
UBR1-204ENST00000563239 AMHR2Q16671 573 aa9.49□□□□□ -0.89
UBR1-204ENST00000563239 FOXD4L6Q3SYB3 417 aaPredicted RBP9.49□□□□□ -0.89
UBR1-204ENST00000563239 ZNF697Q5TEC3 545 aa9.49□□□□□ -0.89
UBR1-204ENST00000563239 RINT1Q6NUQ1 792 aa9.49□□□□□ -0.89
UBR1-204ENST00000563239 FOXD4L3Q6VB84 417 aaPredicted RBP9.49□□□□□ -0.89
UBR1-204ENST00000563239 FAM43BQ6ZT52 329 aaPredicted RBP9.49□□□□□ -0.89
UBR1-204ENST00000563239 C1orf186Q6ZWK4 172 aa9.49□□□□□ -0.89
UBR1-204ENST00000563239 SRGAP1Q7Z6B7 1085 aa9.49□□□□□ -0.89
UBR1-204ENST00000563239 IFNLR1Q8IU57 520 aaPredicted RBP9.49□□□□□ -0.89
UBR1-204ENST00000563239 RNF149Q8NC42 400 aa9.49□□□□□ -0.89
UBR1-204ENST00000563239 MCPH1Q8NEM0 835 aa9.49□□□□□ -0.89
UBR1-204ENST00000563239 ZNF689Q96CS4 500 aaPredicted RBP9.49□□□□□ -0.89
UBR1-204ENST00000563239 FAM161BQ96MY7 647 aa9.49□□□□□ -0.89
UBR1-204ENST00000563239 ZNF396Q96N95 335 aaPredicted RBP9.49□□□□□ -0.89
UBR1-204ENST00000563239 SCLT1Q96NL6 688 aa9.49□□□□□ -0.89
UBR1-204ENST00000563239 CCSER1Q9C0I3 900 aa9.49□□□□□ -0.89
UBR1-204ENST00000563239 ZNF576Q9H609 170 aa9.49□□□□□ -0.89
UBR1-204ENST00000563239 BLOC1S4Q9NUP1 217 aa9.49□□□□□ -0.89
UBR1-204ENST00000563239 TTC3P53804 2025 aa9.49□□□□□ -0.89
UBR1-204ENST00000563239 A0A087X0B3 334 aa9.48□□□□□ -0.89
UBR1-204ENST00000563239 LINC01553A4QN01 128 aa9.48□□□□□ -0.89
UBR1-204ENST00000563239 EPOPA6NHQ4 379 aa9.48□□□□□ -0.89
UBR1-204ENST00000563239 SPTLC2O15270 562 aa9.48□□□□□ -0.89
UBR1-204ENST00000563239 DGKIO75912 1065 aa9.48□□□□□ -0.89
UBR1-204ENST00000563239 YEATS4O95619 227 aa9.48□□□□□ -0.89
UBR1-204ENST00000563239 PLA2G4BP0C869 781 aa9.48□□□□□ -0.89
UBR1-204ENST00000563239 PLCG1P19174 1290 aa9.48□□□□□ -0.89
UBR1-204ENST00000563239 UBA7P41226 1012 aa9.48□□□□□ -0.89
UBR1-204ENST00000563239 SARSP49591 514 aaKnown RBP9.48□□□□□ -0.89
UBR1-204ENST00000563239 GATMP50440 423 aa9.48□□□□□ -0.89
UBR1-204ENST00000563239 DNM1Q05193 864 aaKnown RBP9.48□□□□□ -0.89
UBR1-204ENST00000563239 MBTD1Q05BQ5 628 aa9.48□□□□□ -0.89
UBR1-204ENST00000563239 BECN1Q14457 450 aa9.48□□□□□ -0.89
UBR1-204ENST00000563239 KARSQ15046 597 aaKnown RBP9.48□□□□□ -0.89
UBR1-204ENST00000563239 ZRSR1Q15695 479 aaKnown RBP9.48□□□□□ -0.89
UBR1-204ENST00000563239 NAALADL2Q58DX5 795 aa9.48□□□□□ -0.89
UBR1-204ENST00000563239 ARSHQ5FYA8 562 aa9.48□□□□□ -0.89
UBR1-204ENST00000563239 ODR4Q5SWX8 454 aa9.48□□□□□ -0.89
UBR1-204ENST00000563239 AXDND1Q5T1B0 1012 aaPredicted RBP9.48□□□□□ -0.89
UBR1-204ENST00000563239 FAM102BQ5T8I3 360 aa9.48□□□□□ -0.89
UBR1-204ENST00000563239 CDCA2Q69YH5 1023 aaPredicted RBP9.48□□□□□ -0.89
UBR1-204ENST00000563239 SLC24A5Q71RS6 500 aa9.48□□□□□ -0.89
UBR1-204ENST00000563239 KCTD17Q8N5Z5 321 aa9.48□□□□□ -0.89
UBR1-204ENST00000563239 SYT2Q8N9I0 419 aaPredicted RBP9.48□□□□□ -0.89
UBR1-204ENST00000563239 KRI1Q8N9T8 703 aaKnown RBP9.48□□□□□ -0.89
UBR1-204ENST00000563239 SYMPKQ92797 1274 aaKnown RBP9.48□□□□□ -0.89
UBR1-204ENST00000563239 CCDC43Q96MW1 224 aaKnown RBP9.48□□□□□ -0.89
UBR1-204ENST00000563239 ZBED2Q9BTP6 218 aa9.48□□□□□ -0.89
UBR1-204ENST00000563239 NFKBIZQ9BYH8 718 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms