RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 GAREM2Q75VX8 874 aa7.5□□□□□ -1.21
LINC00557-201ENST00000563184 OTOP2Q7RTS6 562 aa7.5□□□□□ -1.21
LINC00557-201ENST00000563184 CARFQ8N187 725 aa7.5□□□□□ -1.21
LINC00557-201ENST00000563184 GAB3Q8WWW8 586 aa7.5□□□□□ -1.21
LINC00557-201ENST00000563184 RSAD2Q8WXG1 361 aa7.5□□□□□ -1.21
LINC00557-201ENST00000563184 AUTS2Q8WXX7 1259 aa7.5□□□□□ -1.21
LINC00557-201ENST00000563184 TEKT5Q96M29 485 aa7.5□□□□□ -1.21
LINC00557-201ENST00000563184 TOX2Q96NM4 488 aa7.5□□□□□ -1.21
LINC00557-201ENST00000563184 L2HGDHQ9H9P8 463 aa7.5□□□□□ -1.21
LINC00557-201ENST00000563184 XPOTO43592 962 aaKnown RBP7.49□□□□□ -1.21
LINC00557-201ENST00000563184 SEC24DO94855 1032 aaPredicted RBP7.49□□□□□ -1.21
LINC00557-201ENST00000563184 ZRANB2O95218 330 aaKnown RBP eCLIP7.49□□□□□ -1.21
LINC00557-201ENST00000563184 ETV4P43268 484 aa7.49□□□□□ -1.21
LINC00557-201ENST00000563184 RECQLP46063 649 aaPredicted RBP7.49□□□□□ -1.21
LINC00557-201ENST00000563184 SARSP49591 514 aaKnown RBP7.49□□□□□ -1.21
LINC00557-201ENST00000563184 VMACQ2NL98 169 aa7.49□□□□□ -1.21
LINC00557-201ENST00000563184 TMEM240Q5SV17 173 aa7.49□□□□□ -1.21
LINC00557-201ENST00000563184 PNMA8AQ86V59 439 aaPredicted RBP7.49□□□□□ -1.21
LINC00557-201ENST00000563184 OR14C36Q8NHC7 312 aa7.49□□□□□ -1.21
LINC00557-201ENST00000563184 PPP1R14CQ8TAE6 165 aa7.49□□□□□ -1.21
LINC00557-201ENST00000563184 NKD2Q969F2 451 aaPredicted RBP7.49□□□□□ -1.21
LINC00557-201ENST00000563184 DYDC2Q96IM9 177 aa7.49□□□□□ -1.21
LINC00557-201ENST00000563184 SLC2A13Q96QE2 648 aa7.49□□□□□ -1.21
LINC00557-201ENST00000563184 RHOBTB2Q9BYZ6 727 aa7.49□□□□□ -1.21
LINC00557-201ENST00000563184 KATNBL1Q9H079 304 aa7.49□□□□□ -1.21
LINC00557-201ENST00000563184 CDH19Q9H159 772 aa7.49□□□□□ -1.21
LINC00557-201ENST00000563184 TCF7L1Q9HCS4 588 aa7.49□□□□□ -1.21
LINC00557-201ENST00000563184 ZIM2Q9NZV7 527 aa7.49□□□□□ -1.21
LINC00557-201ENST00000563184 LUC7L2Q9Y383 392 aaKnown RBP7.49□□□□□ -1.21
LINC00557-201ENST00000563184 E2F8A0AVK6 867 aa7.48□□□□□ -1.21
LINC00557-201ENST00000563184 KLHL33A6NCF5 533 aa7.48□□□□□ -1.21
LINC00557-201ENST00000563184 SCGB1D2O95969 90 aa7.48□□□□□ -1.21
LINC00557-201ENST00000563184 MTHFD2P13995 350 aa7.48□□□□□ -1.21
LINC00557-201ENST00000563184 C5AR1P21730 350 aa7.48□□□□□ -1.21
LINC00557-201ENST00000563184 CCND1P24385 295 aa7.48□□□□□ -1.21
LINC00557-201ENST00000563184 GPR15P49685 360 aa7.48□□□□□ -1.21
LINC00557-201ENST00000563184 STAT5BP51692 787 aa7.48□□□□□ -1.21
LINC00557-201ENST00000563184 KCNQ1P51787 676 aa7.48□□□□□ -1.21
LINC00557-201ENST00000563184 CDK17Q00537 523 aa7.48□□□□□ -1.21
LINC00557-201ENST00000563184 SPIDRQ14159 915 aa7.48□□□□□ -1.21
LINC00557-201ENST00000563184 TRIM68Q6AZZ1 485 aa7.48□□□□□ -1.21
LINC00557-201ENST00000563184 Q6ZUG5 572 aa7.48□□□□□ -1.21
LINC00557-201ENST00000563184 LARP4Q71RC2 724 aaKnown RBP eCLIP7.48□□□□□ -1.21
LINC00557-201ENST00000563184 CMTR2Q8IYT2 770 aaKnown RBP7.48□□□□□ -1.21
LINC00557-201ENST00000563184 CPA6Q8N4T0 437 aa7.48□□□□□ -1.21
LINC00557-201ENST00000563184 TXNDC5Q8NBS9 432 aaKnown RBP7.48□□□□□ -1.21
LINC00557-201ENST00000563184 ADAMTS17Q8TE56 1095 aa7.48□□□□□ -1.21
LINC00557-201ENST00000563184 AJUBAQ96IF1 538 aa7.48□□□□□ -1.21
LINC00557-201ENST00000563184 HIST1H2AHQ96KK5 128 aa7.48□□□□□ -1.21
LINC00557-201ENST00000563184 HIST1H2AJQ99878 128 aa7.48□□□□□ -1.21
LINC00557-201ENST00000563184 IFT122Q9HBG6 1241 aa7.48□□□□□ -1.21
LINC00557-201ENST00000563184 POLR3BQ9NW08 1133 aaPredicted RBP7.48□□□□□ -1.21
LINC00557-201ENST00000563184 SAE1Q9UBE0 346 aaPredicted RBP7.48□□□□□ -1.21
LINC00557-201ENST00000563184 IP6K2Q9UHH9 426 aa7.48□□□□□ -1.21
LINC00557-201ENST00000563184 DNAI1Q9UI46 699 aa7.48□□□□□ -1.21
LINC00557-201ENST00000563184 TUBD1Q9UJT1 453 aa7.48□□□□□ -1.21
LINC00557-201ENST00000563184 MAFGO15525 162 aa7.47□□□□□ -1.21
LINC00557-201ENST00000563184 MARCH6O60337 910 aa7.47□□□□□ -1.21
LINC00557-201ENST00000563184 SNUPNO95149 360 aaKnown RBP7.47□□□□□ -1.21
LINC00557-201ENST00000563184 CSF2RBP32927 897 aa7.47□□□□□ -1.21
LINC00557-201ENST00000563184 CCT2P78371 535 aaKnown RBP7.47□□□□□ -1.21
LINC00557-201ENST00000563184 ACAP2Q15057 778 aa7.47□□□□□ -1.21
LINC00557-201ENST00000563184 MCTP2Q6DN12 878 aa7.47□□□□□ -1.21
LINC00557-201ENST00000563184 LINC01356Q8N9X3 169 aa7.47□□□□□ -1.21
LINC00557-201ENST00000563184 SSH1Q8WYL5 1049 aa7.47□□□□□ -1.21
LINC00557-201ENST00000563184 MBD6Q96DN6 1003 aa7.47□□□□□ -1.21
LINC00557-201ENST00000563184 CHPF2Q9P2E5 772 aa7.47□□□□□ -1.21
LINC00557-201ENST00000563184 MRFAP1Q9Y605 127 aa7.47□□□□□ -1.21
LINC00557-201ENST00000563184 TSPAN6O43657 245 aa7.46□□□□□ -1.22
LINC00557-201ENST00000563184 PPP2R5AQ15172 486 aa7.46□□□□□ -1.22
LINC00557-201ENST00000563184 ZNF827Q17R98 1081 aa7.46□□□□□ -1.22
LINC00557-201ENST00000563184 CCDC178Q5BJE1 867 aa7.46□□□□□ -1.22
LINC00557-201ENST00000563184 MBNL2Q5VZF2 373 aaKnown RBP7.46□□□□□ -1.22
LINC00557-201ENST00000563184 ZNF761Q86XN6 746 aaPredicted RBP7.46□□□□□ -1.22
LINC00557-201ENST00000563184 FMNL3Q8IVF7 1028 aa7.46□□□□□ -1.22
LINC00557-201ENST00000563184 ZSCAN18Q8TBC5 510 aaPredicted RBP7.46□□□□□ -1.22
LINC00557-201ENST00000563184 TSR2Q969E8 191 aaKnown RBP7.46□□□□□ -1.22
LINC00557-201ENST00000563184 CAMKK2Q96RR4 588 aa7.46□□□□□ -1.22
LINC00557-201ENST00000563184 TMEM168Q9H0V1 697 aa7.46□□□□□ -1.22
LINC00557-201ENST00000563184 LUC7LQ9NQ29 371 aaKnown RBP7.46□□□□□ -1.22
LINC00557-201ENST00000563184 TCEAL9Q9UHQ7 104 aa7.46□□□□□ -1.22
LINC00557-201ENST00000563184 ZNF180Q9UJW8 692 aa7.46□□□□□ -1.22
LINC00557-201ENST00000563184 INVSQ9Y283 1065 aa7.46□□□□□ -1.22
LINC00557-201ENST00000563184 ADAMTS20P59510 1910 aa7.45□□□□□ -1.22
LINC00557-201ENST00000563184 NUAK1O60285 661 aa7.45□□□□□ -1.22
LINC00557-201ENST00000563184 HMGCRP04035 888 aa7.45□□□□□ -1.22
LINC00557-201ENST00000563184 ZNF888P0CJ79 500 aaPredicted RBP7.45□□□□□ -1.22
LINC00557-201ENST00000563184 HNRNPLP14866 589 aaKnown RBP eCLIP7.45□□□□□ -1.22
LINC00557-201ENST00000563184 ZSCAN20P17040 1043 aaPredicted RBP7.45□□□□□ -1.22
LINC00557-201ENST00000563184 SLC5A3P53794 718 aa7.45□□□□□ -1.22
LINC00557-201ENST00000563184 FAM26FQ5R3K3 315 aa7.45□□□□□ -1.22
LINC00557-201ENST00000563184 EFCAB2Q5VUJ9 269 aa7.45□□□□□ -1.22
LINC00557-201ENST00000563184 REXO1L1PQ8IX06 675 aa7.45□□□□□ -1.22
LINC00557-201ENST00000563184 IFNL2Q8IZJ0 200 aa7.45□□□□□ -1.22
LINC00557-201ENST00000563184 ACE2Q9BYF1 805 aaPredicted RBP7.45□□□□□ -1.22
LINC00557-201ENST00000563184 OSBPL6Q9BZF3 934 aa7.45□□□□□ -1.22
LINC00557-201ENST00000563184 SCOCQ9UIL1 159 aa7.45□□□□□ -1.22
LINC00557-201ENST00000563184 ADAM29Q9UKF5 820 aa7.45□□□□□ -1.22
LINC00557-201ENST00000563184 PTPN22Q9Y2R2 807 aa7.45□□□□□ -1.22
LINC00557-201ENST00000563184 NDUFS2O75306 463 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms