RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 DDX19AQ9NUU7 478 aaKnown RBP20.78■□□□□ 0.92
CDH11-206ENST00000562998 EYSQ5T1H1 3165 aa20.78■□□□□ 0.92
CDH11-206ENST00000562998 EPOPA6NHQ4 379 aa20.77■□□□□ 0.92
CDH11-206ENST00000562998 USO1O60763 962 aaKnown RBP20.77■□□□□ 0.92
CDH11-206ENST00000562998 CYP11B2P19099 503 aa20.77■□□□□ 0.92
CDH11-206ENST00000562998 GLRA2P23416 452 aa20.77■□□□□ 0.92
CDH11-206ENST00000562998 GRIN1Q05586 938 aa20.77■□□□□ 0.92
CDH11-206ENST00000562998 ADGRE1Q14246 886 aa20.77■□□□□ 0.92
CDH11-206ENST00000562998 PADI6Q6TGC4 694 aa20.77■□□□□ 0.92
CDH11-206ENST00000562998 KCNK18Q7Z418 384 aa20.77■□□□□ 0.92
CDH11-206ENST00000562998 MCPH1Q8NEM0 835 aa20.77■□□□□ 0.92
CDH11-206ENST00000562998 SCLT1Q96NL6 688 aa20.77■□□□□ 0.92
CDH11-206ENST00000562998 PNMA5Q96PV4 448 aa20.77■□□□□ 0.92
CDH11-206ENST00000562998 YME1L1Q96TA2 773 aa20.77■□□□□ 0.92
CDH11-206ENST00000562998 TRAIPQ9BWF2 469 aa20.77■□□□□ 0.92
CDH11-206ENST00000562998 NFKBIZQ9BYH8 718 aa20.77■□□□□ 0.92
CDH11-206ENST00000562998 ELAC1Q9H777 363 aaKnown RBP20.77■□□□□ 0.92
CDH11-206ENST00000562998 CHST12Q9NRB3 414 aa20.77■□□□□ 0.92
CDH11-206ENST00000562998 DENND3A2RUS2 1198 aa20.76■□□□□ 0.91
CDH11-206ENST00000562998 SLC26A4O43511 780 aa20.76■□□□□ 0.91
CDH11-206ENST00000562998 EYA4O95677 639 aa20.76■□□□□ 0.91
CDH11-206ENST00000562998 SRGAP2CP0DJJ0 459 aa20.76■□□□□ 0.91
CDH11-206ENST00000562998 SFPQP23246 707 aaKnown RBP eCLIP20.76■□□□□ 0.91
CDH11-206ENST00000562998 PTENP60484 403 aa20.76■□□□□ 0.91
CDH11-206ENST00000562998 CAPSQ13938 189 aa20.76■□□□□ 0.91
CDH11-206ENST00000562998 RNF149Q8NC42 400 aa20.76■□□□□ 0.91
CDH11-206ENST00000562998 CCDC43Q96MW1 224 aaKnown RBP20.76■□□□□ 0.91
CDH11-206ENST00000562998 TGS1Q96RS0 853 aaKnown RBP20.76■□□□□ 0.91
CDH11-206ENST00000562998 BHMT2Q9H2M3 363 aa20.76■□□□□ 0.91
CDH11-206ENST00000562998 GPRC5CQ9NQ84 441 aa20.76■□□□□ 0.91
CDH11-206ENST00000562998 ADGRA3Q8IWK6 1321 aa20.76■□□□□ 0.91
CDH11-206ENST00000562998 MYH15Q9Y2K3 1946 aa20.75■□□□□ 0.91
CDH11-206ENST00000562998 ARHGEF35A5YM69 484 aa20.75■□□□□ 0.91
CDH11-206ENST00000562998 E9PMD0 336 aa20.75■□□□□ 0.91
CDH11-206ENST00000562998 STAG3L1P0CL83 205 aa20.75■□□□□ 0.91
CDH11-206ENST00000562998 POU3F3P20264 500 aaPredicted RBP20.75■□□□□ 0.91
CDH11-206ENST00000562998 LONP1P36776 959 aaKnown RBP20.75■□□□□ 0.91
CDH11-206ENST00000562998 GRB10Q13322 594 aa20.75■□□□□ 0.91
CDH11-206ENST00000562998 TMEM119Q4V9L6 283 aa20.75■□□□□ 0.91
CDH11-206ENST00000562998 USP28Q96RU2 1077 aa20.75■□□□□ 0.91
CDH11-206ENST00000562998 POLR3FQ9H1D9 316 aaPredicted RBP20.75■□□□□ 0.91
CDH11-206ENST00000562998 TMEM161AQ9NX61 479 aa20.75■□□□□ 0.91
CDH11-206ENST00000562998 DNM3Q9UQ16 869 aa20.75■□□□□ 0.91
CDH11-206ENST00000562998 A0A0U1RQF3 1178 aa20.74■□□□□ 0.91
CDH11-206ENST00000562998 LPXNO60711 386 aa20.74■□□□□ 0.91
CDH11-206ENST00000562998 ZSCAN20P17040 1043 aaPredicted RBP20.74■□□□□ 0.91
CDH11-206ENST00000562998 HOXA11P31270 313 aaPredicted RBP20.74■□□□□ 0.91
CDH11-206ENST00000562998 PCBP1Q15365 356 aaKnown RBP eCLIP20.74■□□□□ 0.91
CDH11-206ENST00000562998 FNDC1Q4ZHG4 1894 aaPredicted RBP20.74■□□□□ 0.91
CDH11-206ENST00000562998 ZNF598Q86UK7 904 aaKnown RBP20.74■□□□□ 0.91
CDH11-206ENST00000562998 CLP1Q92989 425 aaKnown RBP20.74■□□□□ 0.91
CDH11-206ENST00000562998 CERS4Q9HA82 394 aa20.74■□□□□ 0.91
CDH11-206ENST00000562998 AGPAT5Q9NUQ2 364 aa20.74■□□□□ 0.91
CDH11-206ENST00000562998 RNF19AQ9NV58 838 aa20.74■□□□□ 0.91
CDH11-206ENST00000562998 RNF216Q9NWF9 866 aaPredicted RBP20.74■□□□□ 0.91
CDH11-206ENST00000562998 FBXO2Q9UK22 296 aaPredicted RBP20.74■□□□□ 0.91
CDH11-206ENST00000562998 RALGAPA2Q2PPJ7 1873 aa20.73■□□□□ 0.91
CDH11-206ENST00000562998 HSP90AA1P07900 732 aaKnown RBP20.73■□□□□ 0.91
CDH11-206ENST00000562998 FOSL2P15408 326 aa20.73■□□□□ 0.91
CDH11-206ENST00000562998 ATF7P17544 494 aaPredicted RBP20.73■□□□□ 0.91
CDH11-206ENST00000562998 PHKA2P46019 1235 aa20.73■□□□□ 0.91
CDH11-206ENST00000562998 NASPP49321 788 aaPredicted RBP20.73■□□□□ 0.91
CDH11-206ENST00000562998 PKP1Q13835 747 aa20.73■□□□□ 0.91
CDH11-206ENST00000562998 TFDP1Q14186 410 aa20.73■□□□□ 0.91
CDH11-206ENST00000562998 SLC39A14Q15043 492 aa20.73■□□□□ 0.91
CDH11-206ENST00000562998 AMHR2Q16671 573 aa20.73■□□□□ 0.91
CDH11-206ENST00000562998 ECHDC2Q86YB7 292 aa20.73■□□□□ 0.91
CDH11-206ENST00000562998 CMTR2Q8IYT2 770 aaKnown RBP20.73■□□□□ 0.91
CDH11-206ENST00000562998 ARNTL2Q8WYA1 636 aa20.73■□□□□ 0.91
CDH11-206ENST00000562998 SAMD11Q96NU1 681 aa20.73■□□□□ 0.91
CDH11-206ENST00000562998 C17orf80Q9BSJ5 609 aa20.73■□□□□ 0.91
CDH11-206ENST00000562998 NT5C3AQ9H0P0 336 aa20.73■□□□□ 0.91
CDH11-206ENST00000562998 DACT1Q9NYF0 836 aa20.73■□□□□ 0.91
CDH11-206ENST00000562998 PCDHB7Q9Y5E2 793 aa20.73■□□□□ 0.91
CDH11-206ENST00000562998 SRPRBQ9Y5M8 271 aaKnown RBP20.73■□□□□ 0.91
CDH11-206ENST00000562998 COL4A4P53420 1690 aaPredicted RBP20.73■□□□□ 0.91
CDH11-206ENST00000562998 NLRC5Q86WI3 1866 aa20.73■□□□□ 0.91
CDH11-206ENST00000562998 RFXAPO00287 272 aa20.72■□□□□ 0.91
CDH11-206ENST00000562998 ZSCAN22P10073 491 aaPredicted RBP20.72■□□□□ 0.91
CDH11-206ENST00000562998 MBTD1Q05BQ5 628 aa20.72■□□□□ 0.91
CDH11-206ENST00000562998 CDCA2Q69YH5 1023 aaPredicted RBP20.72■□□□□ 0.91
CDH11-206ENST00000562998 C1orf186Q6ZWK4 172 aa20.72■□□□□ 0.91
CDH11-206ENST00000562998 CATSPER4Q7RTX7 472 aa20.72■□□□□ 0.91
CDH11-206ENST00000562998 CABP7Q86V35 215 aa20.72■□□□□ 0.91
CDH11-206ENST00000562998 LRRC15Q8TF66 581 aa20.72■□□□□ 0.91
CDH11-206ENST00000562998 BSNDQ8WZ55 320 aa20.72■□□□□ 0.91
CDH11-206ENST00000562998 CCSER1Q9C0I3 900 aa20.72■□□□□ 0.91
CDH11-206ENST00000562998 REV3LO60673 3130 aa20.71■□□□□ 0.91
CDH11-206ENST00000562998 C5orf67F2Z3F1 127 aa20.71■□□□□ 0.91
CDH11-206ENST00000562998 ZNF623O75123 536 aa20.71■□□□□ 0.91
CDH11-206ENST00000562998 EOMESO95936 686 aa20.71■□□□□ 0.91
CDH11-206ENST00000562998 GATMP50440 423 aa20.71■□□□□ 0.91
CDH11-206ENST00000562998 EPC2Q52LR7 807 aa20.71■□□□□ 0.91
CDH11-206ENST00000562998 FAM102BQ5T8I3 360 aa20.71■□□□□ 0.91
CDH11-206ENST00000562998 RINT1Q6NUQ1 792 aa20.71■□□□□ 0.91
CDH11-206ENST00000562998 MAEAQ7L5Y9 396 aa20.71■□□□□ 0.91
CDH11-206ENST00000562998 DAW1Q8N136 415 aa20.71■□□□□ 0.91
CDH11-206ENST00000562998 FIBCD1Q8N539 461 aa20.71■□□□□ 0.91
CDH11-206ENST00000562998 SYT2Q8N9I0 419 aaPredicted RBP20.71■□□□□ 0.91
CDH11-206ENST00000562998 GAS2L1Q99501 681 aaPredicted RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms