RNA–Protein interactions for RNA: ENST00000562872.1

KLHDC4-209, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-209ENST00000562872 FAM20AQ96MK3 541 aa12.4□□□□□ -0.42
KLHDC4-209ENST00000562872 LRFN3Q9BTN0 628 aa12.4□□□□□ -0.42
KLHDC4-209ENST00000562872 TMEM117Q9H0C3 514 aa12.4□□□□□ -0.42
KLHDC4-209ENST00000562872 CYP26B1Q9NR63 512 aa12.4□□□□□ -0.42
KLHDC4-209ENST00000562872 SUCLA2Q9P2R7 463 aaPredicted RBP12.4□□□□□ -0.42
KLHDC4-209ENST00000562872 BARX2Q9UMQ3 279 aaPredicted RBP12.4□□□□□ -0.42
KLHDC4-209ENST00000562872 A0A0U1RQF3 1178 aa12.39□□□□□ -0.43
KLHDC4-209ENST00000562872 BTBD18B2RXH4 712 aa12.39□□□□□ -0.43
KLHDC4-209ENST00000562872 FSCN2O14926 492 aa12.39□□□□□ -0.43
KLHDC4-209ENST00000562872 GCFC2P16383 781 aaKnown RBP12.39□□□□□ -0.43
KLHDC4-209ENST00000562872 SSTR3P32745 418 aaPredicted RBP12.39□□□□□ -0.43
KLHDC4-209ENST00000562872 KRT2P35908 639 aa12.39□□□□□ -0.43
KLHDC4-209ENST00000562872 CYP4A11Q02928 519 aa12.39□□□□□ -0.43
KLHDC4-209ENST00000562872 CTTNQ14247 550 aaKnown RBP12.39□□□□□ -0.43
KLHDC4-209ENST00000562872 ANKRD1Q15327 319 aa12.39□□□□□ -0.43
KLHDC4-209ENST00000562872 HELQQ8TDG4 1101 aa12.39□□□□□ -0.43
KLHDC4-209ENST00000562872 TMEM143Q96AN5 459 aa12.39□□□□□ -0.43
KLHDC4-209ENST00000562872 NLRP4Q96MN2 994 aa12.39□□□□□ -0.43
KLHDC4-209ENST00000562872 LXNQ9BS40 222 aa12.39□□□□□ -0.43
KLHDC4-209ENST00000562872 GCOM2Q9BZD3 368 aaPredicted RBP12.39□□□□□ -0.43
KLHDC4-209ENST00000562872 MINDY3Q9H8M7 445 aa12.39□□□□□ -0.43
KLHDC4-209ENST00000562872 IFT122Q9HBG6 1241 aa12.39□□□□□ -0.43
KLHDC4-209ENST00000562872 PCDHB12Q9Y5F1 795 aa12.39□□□□□ -0.43
KLHDC4-209ENST00000562872 A0A087WWV3 80 aa12.38□□□□□ -0.43
KLHDC4-209ENST00000562872 C19orf67A6NJJ6 358 aa12.38□□□□□ -0.43
KLHDC4-209ENST00000562872 HIDE1A8MVS5 230 aa12.38□□□□□ -0.43
KLHDC4-209ENST00000562872 PI4K2BG5E9Z4 385 aa12.38□□□□□ -0.43
KLHDC4-209ENST00000562872 B4GALT3O60512 393 aa12.38□□□□□ -0.43
KLHDC4-209ENST00000562872 P4HBP07237 508 aaKnown RBP12.38□□□□□ -0.43
KLHDC4-209ENST00000562872 ZSCAN20P17040 1043 aaPredicted RBP12.38□□□□□ -0.43
KLHDC4-209ENST00000562872 XBP1P17861 261 aa12.38□□□□□ -0.43
KLHDC4-209ENST00000562872 LAG3P18627 525 aa12.38□□□□□ -0.43
KLHDC4-209ENST00000562872 NDUFV1P49821 464 aa12.38□□□□□ -0.43
KLHDC4-209ENST00000562872 GUCY1B3Q02153 619 aa12.38□□□□□ -0.43
KLHDC4-209ENST00000562872 EPHA7Q15375 998 aa12.38□□□□□ -0.43
KLHDC4-209ENST00000562872 SMAD2Q15796 467 aaKnown RBP12.38□□□□□ -0.43
KLHDC4-209ENST00000562872 PUS10Q3MIT2 529 aaKnown RBP12.38□□□□□ -0.43
KLHDC4-209ENST00000562872 PLPP4Q5VZY2 271 aa12.38□□□□□ -0.43
KLHDC4-209ENST00000562872 ERICH6BQ5W0A0 696 aa12.38□□□□□ -0.43
KLHDC4-209ENST00000562872 KCNT2Q6UVM3 1135 aa12.38□□□□□ -0.43
KLHDC4-209ENST00000562872 TMEM173Q86WV6 379 aaPredicted RBP12.38□□□□□ -0.43
KLHDC4-209ENST00000562872 DIS3L2Q8IYB7 885 aaKnown RBP12.38□□□□□ -0.43
KLHDC4-209ENST00000562872 LRRC43Q8N309 656 aa12.38□□□□□ -0.43
KLHDC4-209ENST00000562872 EFHBQ8N7U6 833 aa12.38□□□□□ -0.43
KLHDC4-209ENST00000562872 CEP170P1Q96L14 293 aa12.38□□□□□ -0.43
KLHDC4-209ENST00000562872 C1QTNF1Q9BXJ1 281 aa12.38□□□□□ -0.43
KLHDC4-209ENST00000562872 DHX33Q9H6R0 707 aaKnown RBP12.38□□□□□ -0.43
KLHDC4-209ENST00000562872 TLR9Q9NR96 1032 aa12.38□□□□□ -0.43
KLHDC4-209ENST00000562872 CD207Q9UJ71 328 aa12.38□□□□□ -0.43
KLHDC4-209ENST00000562872 PIN4Q9Y237 131 aaKnown RBP12.38□□□□□ -0.43
KLHDC4-209ENST00000562872 ARID2Q68CP9 1835 aa12.37□□□□□ -0.43
KLHDC4-209ENST00000562872 NT5C1B-RDH14C9J2C7 533 aa12.37□□□□□ -0.43
KLHDC4-209ENST00000562872 TBX3O15119 743 aa12.37□□□□□ -0.43
KLHDC4-209ENST00000562872 NCK2O43639 380 aa12.37□□□□□ -0.43
KLHDC4-209ENST00000562872 YWHABP31946 246 aaKnown RBP12.37□□□□□ -0.43
KLHDC4-209ENST00000562872 PHKA2P46019 1235 aa12.37□□□□□ -0.43
KLHDC4-209ENST00000562872 SMAD4Q13485 552 aaKnown RBP12.37□□□□□ -0.43
KLHDC4-209ENST00000562872 ADHFE1Q8IWW8 467 aa12.37□□□□□ -0.43
KLHDC4-209ENST00000562872 C4orf19Q8IY42 314 aa12.37□□□□□ -0.43
KLHDC4-209ENST00000562872 MICAL1Q8TDZ2 1067 aa12.37□□□□□ -0.43
KLHDC4-209ENST00000562872 BCL7CQ8WUZ0 217 aaPredicted RBP12.37□□□□□ -0.43
KLHDC4-209ENST00000562872 TMEM60Q9H2L4 133 aa12.37□□□□□ -0.43
KLHDC4-209ENST00000562872 TLE6Q9H808 572 aa12.37□□□□□ -0.43
KLHDC4-209ENST00000562872 XPNPEP1Q9NQW7 623 aa12.37□□□□□ -0.43
KLHDC4-209ENST00000562872 AAASQ9NRG9 546 aa12.37□□□□□ -0.43
KLHDC4-209ENST00000562872 COL4A3BPQ9Y5P4 624 aa12.37□□□□□ -0.43
KLHDC4-209ENST00000562872 MARCH6O60337 910 aa12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 SLITRK3O94933 977 aa12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 EYA4O95677 639 aa12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 SFPQP23246 707 aaKnown RBP eCLIP12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 DNM2P50570 870 aa12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 AFF1P51825 1210 aaKnown RBP12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 POLGP54098 1239 aaPredicted RBP12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 PLCB3Q01970 1234 aa12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 UBE3AQ05086 875 aa12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 KCNC3Q14003 757 aa12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 EMC2Q15006 297 aa12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 DUSP6Q16828 381 aa12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 TMEM31Q5JXX7 168 aa12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 TWF2Q6IBS0 349 aaKnown RBP12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 FAM43BQ6ZT52 329 aaPredicted RBP12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 CATSPER4Q7RTX7 472 aa12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 ZNF410Q86VK4 478 aa12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 CCDC83Q8IWF9 413 aa12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 ABI1Q8IZP0 508 aa12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 SLC39A11Q8N1S5 342 aa12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 ZNF710Q8N1W2 664 aa12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 SMRP1Q8NCR6 262 aa12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 PRPF31Q8WWY3 499 aaKnown RBP12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 MRPS27Q92552 414 aaKnown RBP12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 WASF1Q92558 559 aa12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 ZNF558Q96NG5 402 aa12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 KIF2CQ99661 725 aa12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 TCF25Q9BQ70 676 aa12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 EIF2AK1Q9BQI3 630 aaKnown RBP12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 FAM105AQ9NUU6 356 aa12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 CDH22Q9UJ99 828 aa12.36□□□□□ -0.43
KLHDC4-209ENST00000562872 POTEMA6NI47 508 aa12.35□□□□□ -0.43
KLHDC4-209ENST00000562872 HOXA2O43364 376 aa12.35□□□□□ -0.43
KLHDC4-209ENST00000562872 EOMESO95936 686 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms